data_VBG # _chem_comp.id VBG _chem_comp.name "2-({[2-(4-{(3R)-1-(4-acetylpiperazine-1-carbonyl)-3-[(4-fluorophenyl)sulfonyl]pyrrolidin-3-yl}phenyl)-1,1,1,3,3,3-hexafluoropropan-2-yl]oxy}methyl)-3-fluorobenzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H30 F8 N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-22 _chem_comp.pdbx_modified_date 2020-08-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 758.678 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VBG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JH2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VBG O1 O1 O 0 1 N N N 115.980 31.175 -2.319 10.580 -1.976 -1.607 O1 VBG 1 VBG O2 O2 O 0 1 N N N 125.879 29.626 -6.592 1.553 2.486 2.571 O2 VBG 2 VBG O3 O3 O 0 1 N N N 123.906 29.278 -5.143 3.392 2.986 0.993 O3 VBG 3 VBG O4 O4 O 0 1 N N N 130.398 35.398 -4.986 -4.106 -0.911 -0.194 O4 VBG 4 VBG C1 C1 C 0 1 Y N N 128.618 33.792 -5.667 -1.976 -0.747 0.894 C1 VBG 5 VBG C2 C2 C 0 1 Y N N 127.857 33.831 -4.503 -1.575 -0.033 -0.221 C2 VBG 6 VBG C3 C3 C 0 1 Y N N 126.588 33.285 -4.464 -0.281 0.443 -0.308 C3 VBG 7 VBG C4 C4 C 0 1 Y N N 126.035 32.673 -5.582 0.614 0.206 0.719 C4 VBG 8 VBG C5 C5 C 0 1 Y N N 126.761 32.717 -6.763 0.214 -0.508 1.833 C5 VBG 9 VBG C6 C6 C 0 1 N N R 124.759 31.844 -5.481 2.026 0.724 0.623 C6 VBG 10 VBG F7 F1 F 0 1 N N N 132.037 38.145 -5.700 -5.664 -3.152 -2.185 F7 VBG 11 VBG C28 C7 C 0 1 Y N N 131.301 38.434 -4.597 -6.178 -1.931 -2.446 C28 VBG 12 VBG C29 C8 C 0 1 Y N N 131.784 39.372 -3.718 -6.761 -1.673 -3.677 C29 VBG 13 VBG C30 C9 C 0 1 Y N N 131.108 39.562 -2.525 -7.289 -0.425 -3.951 C30 VBG 14 VBG C31 C10 C 0 1 Y N N 129.950 38.856 -2.258 -7.240 0.573 -3.000 C31 VBG 15 VBG C32 C11 C 0 1 Y N N 129.442 37.957 -3.195 -6.654 0.322 -1.758 C32 VBG 16 VBG C33 C12 C 0 1 N N N 128.126 37.414 -2.986 -6.600 1.355 -0.767 C33 VBG 17 VBG N3 N1 N 0 1 N N N 127.072 37.023 -2.794 -6.557 2.174 0.020 N3 VBG 18 VBG C27 C13 C 0 1 Y N N 130.144 37.703 -4.387 -6.127 -0.941 -1.483 C27 VBG 19 VBG C26 C14 C 0 1 N N N 129.710 36.612 -5.343 -5.500 -1.223 -0.142 C26 VBG 20 VBG C23 C15 C 0 1 N N N 130.134 34.139 -5.645 -3.387 -1.266 0.989 C23 VBG 21 VBG C24 C16 C 0 1 N N N 130.962 33.085 -4.870 -4.076 -0.650 2.209 C24 VBG 22 VBG F3 F2 F 0 1 N N N 132.260 33.372 -4.886 -5.384 -1.137 2.301 F3 VBG 23 VBG F2 F3 F 0 1 N N N 130.820 31.866 -5.389 -3.368 -0.991 3.366 F2 VBG 24 VBG F1 F4 F 0 1 N N N 130.598 33.011 -3.591 -4.105 0.743 2.073 F1 VBG 25 VBG C25 C17 C 0 1 N N N 130.762 34.291 -7.057 -3.362 -2.789 1.133 C25 VBG 26 VBG F6 F5 F 0 1 N N N 130.893 33.113 -7.669 -4.660 -3.257 1.364 F6 VBG 27 VBG F5 F6 F 0 1 N N N 130.037 35.073 -7.852 -2.862 -3.360 -0.042 F5 VBG 28 VBG F4 F7 F 0 1 N N N 131.977 34.827 -7.002 -2.541 -3.142 2.210 F4 VBG 29 VBG C C18 C 0 1 Y N N 128.028 33.262 -6.806 -1.079 -0.989 1.918 C VBG 30 VBG S S1 S 0 1 N N N 125.136 29.975 -5.412 2.120 2.417 1.270 S VBG 31 VBG C17 C19 C 0 1 Y N N 126.203 29.791 -4.023 1.005 3.335 0.261 C17 VBG 32 VBG C22 C20 C 0 1 Y N N 127.556 30.015 -4.189 1.456 3.933 -0.901 C22 VBG 33 VBG C21 C21 C 0 1 Y N N 128.350 30.227 -3.081 0.582 4.653 -1.693 C21 VBG 34 VBG C20 C22 C 0 1 Y N N 127.773 30.153 -1.846 -0.746 4.777 -1.322 C20 VBG 35 VBG F F8 F 0 1 N N N 128.536 30.466 -0.764 -1.601 5.480 -2.096 F VBG 36 VBG C19 C23 C 0 1 Y N N 126.458 29.827 -1.653 -1.197 4.177 -0.159 C19 VBG 37 VBG C18 C24 C 0 1 Y N N 125.658 29.643 -2.763 -0.323 3.453 0.629 C18 VBG 38 VBG C9 C25 C 0 1 N N N 123.799 32.128 -6.666 2.515 0.681 -0.839 C9 VBG 39 VBG C8 C26 C 0 1 N N N 122.383 32.216 -6.131 3.733 -0.267 -0.824 C8 VBG 40 VBG N N2 N 0 1 N N N 122.535 31.952 -4.705 4.224 -0.223 0.573 N VBG 41 VBG C7 C27 C 0 1 N N N 123.869 32.371 -4.311 2.991 -0.200 1.396 C7 VBG 42 VBG C10 C28 C 0 1 N N N 121.661 31.384 -3.826 5.502 -0.206 1.000 C10 VBG 43 VBG O O5 O 0 1 N N N 122.054 31.037 -2.727 5.749 0.009 2.171 O VBG 44 VBG N1 N3 N 0 1 N N N 120.371 31.124 -4.283 6.507 -0.428 0.130 N1 VBG 45 VBG C14 C29 C 0 1 N N N 119.562 30.166 -3.514 7.902 -0.183 0.520 C14 VBG 46 VBG C13 C30 C 0 1 N N N 118.700 30.908 -2.503 8.708 -1.467 0.287 C13 VBG 47 VBG N2 N4 N 0 1 N N N 117.902 31.946 -3.176 8.428 -1.958 -1.070 N2 VBG 48 VBG C15 C31 C 0 1 N N N 116.544 31.952 -3.064 9.432 -2.181 -1.940 C15 VBG 49 VBG C16 C32 C 0 1 N N N 115.768 32.969 -3.842 9.129 -2.684 -3.328 C16 VBG 50 VBG C12 C33 C 0 1 N N N 118.729 32.888 -3.947 7.032 -2.203 -1.460 C12 VBG 51 VBG C11 C34 C 0 1 N N N 119.546 32.131 -4.965 6.227 -0.924 -1.225 C11 VBG 52 VBG H1 H1 H 0 1 N N N 128.264 34.295 -3.617 -2.274 0.152 -1.023 H1 VBG 53 VBG H2 H2 H 0 1 N N N 126.017 33.335 -3.549 0.032 1.000 -1.179 H2 VBG 54 VBG H3 H3 H 0 1 N N N 126.326 32.317 -7.667 0.913 -0.694 2.635 H3 VBG 55 VBG H4 H4 H 0 1 N N N 132.668 39.947 -3.951 -6.802 -2.451 -4.425 H4 VBG 56 VBG H5 H5 H 0 1 N N N 131.487 40.266 -1.799 -7.741 -0.231 -4.912 H5 VBG 57 VBG H6 H6 H 0 1 N N N 129.436 39.001 -1.319 -7.653 1.548 -3.216 H6 VBG 58 VBG H7 H7 H 0 1 N N N 129.968 36.896 -6.374 -5.627 -2.277 0.104 H7 VBG 59 VBG H8 H8 H 0 1 N N N 128.623 36.460 -5.266 -5.981 -0.611 0.620 H8 VBG 60 VBG H9 H9 H 0 1 N N N 128.569 33.276 -7.741 -1.392 -1.546 2.789 H9 VBG 61 VBG H10 H10 H 0 1 N N N 127.989 30.024 -5.178 2.493 3.837 -1.190 H10 VBG 62 VBG H11 H11 H 0 1 N N N 129.402 30.446 -3.188 0.936 5.121 -2.600 H11 VBG 63 VBG H12 H12 H 0 1 N N N 126.056 29.716 -0.657 -2.233 4.273 0.132 H12 VBG 64 VBG H13 H13 H 0 1 N N N 124.616 29.386 -2.647 -0.676 2.982 1.535 H13 VBG 65 VBG H14 H14 H 0 1 N N N 123.867 31.313 -7.402 1.734 0.285 -1.489 H14 VBG 66 VBG H15 H15 H 0 1 N N N 124.074 33.079 -7.146 2.814 1.676 -1.169 H15 VBG 67 VBG H16 H16 H 0 1 N N N 121.961 33.217 -6.302 3.430 -1.280 -1.088 H16 VBG 68 VBG H17 H17 H 0 1 N N N 121.738 31.461 -6.603 4.502 0.091 -1.509 H17 VBG 69 VBG H18 H18 H 0 1 N N N 124.161 31.914 -3.354 3.199 0.210 2.385 H18 VBG 70 VBG H19 H19 H 0 1 N N N 123.932 33.466 -4.228 2.571 -1.203 1.480 H19 VBG 71 VBG H20 H20 H 0 1 N N N 118.914 29.602 -4.201 8.316 0.623 -0.086 H20 VBG 72 VBG H21 H21 H 0 1 N N N 120.228 29.470 -2.984 7.945 0.089 1.574 H21 VBG 73 VBG H22 H22 H 0 1 N N N 118.024 30.194 -2.009 9.773 -1.254 0.386 H22 VBG 74 VBG H23 H23 H 0 1 N N N 119.349 31.380 -1.750 8.417 -2.220 1.019 H23 VBG 75 VBG H24 H24 H 0 1 N N N 114.697 32.867 -3.614 8.489 -1.968 -3.842 H24 VBG 76 VBG H25 H25 H 0 1 N N N 116.107 33.978 -3.566 10.060 -2.803 -3.882 H25 VBG 77 VBG H26 H26 H 0 1 N N N 115.931 32.809 -4.918 8.620 -3.646 -3.262 H26 VBG 78 VBG H27 H27 H 0 1 N N N 119.403 33.426 -3.264 6.990 -2.475 -2.514 H27 VBG 79 VBG H28 H28 H 0 1 N N N 118.078 33.609 -4.463 6.620 -3.011 -0.856 H28 VBG 80 VBG H29 H29 H 0 1 N N N 120.198 32.832 -5.507 5.163 -1.141 -1.322 H29 VBG 81 VBG H30 H30 H 0 1 N N N 118.873 31.632 -5.677 6.518 -0.172 -1.958 H30 VBG 82 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VBG F5 C25 SING N N 1 VBG F6 C25 SING N N 2 VBG C25 F4 SING N N 3 VBG C25 C23 SING N N 4 VBG C C5 DOUB Y N 5 VBG C C1 SING Y N 6 VBG C5 C4 SING Y N 7 VBG C9 C8 SING N N 8 VBG C9 C6 SING N N 9 VBG O2 S DOUB N N 10 VBG C8 N SING N N 11 VBG F7 C28 SING N N 12 VBG C1 C23 SING N N 13 VBG C1 C2 DOUB Y N 14 VBG C23 O4 SING N N 15 VBG C23 C24 SING N N 16 VBG C4 C6 SING N N 17 VBG C4 C3 DOUB Y N 18 VBG C6 S SING N N 19 VBG C6 C7 SING N N 20 VBG S O3 DOUB N N 21 VBG S C17 SING N N 22 VBG F2 C24 SING N N 23 VBG C26 O4 SING N N 24 VBG C26 C27 SING N N 25 VBG C11 N1 SING N N 26 VBG C11 C12 SING N N 27 VBG F3 C24 SING N N 28 VBG C24 F1 SING N N 29 VBG N C7 SING N N 30 VBG N C10 SING N N 31 VBG C28 C27 DOUB Y N 32 VBG C28 C29 SING Y N 33 VBG C2 C3 SING Y N 34 VBG C27 C32 SING Y N 35 VBG N1 C10 SING N N 36 VBG N1 C14 SING N N 37 VBG C22 C17 DOUB Y N 38 VBG C22 C21 SING Y N 39 VBG C17 C18 SING Y N 40 VBG C12 N2 SING N N 41 VBG C16 C15 SING N N 42 VBG C10 O DOUB N N 43 VBG C29 C30 DOUB Y N 44 VBG C14 C13 SING N N 45 VBG C32 C33 SING N N 46 VBG C32 C31 DOUB Y N 47 VBG N2 C15 SING N N 48 VBG N2 C13 SING N N 49 VBG C21 C20 DOUB Y N 50 VBG C15 O1 DOUB N N 51 VBG C33 N3 TRIP N N 52 VBG C18 C19 DOUB Y N 53 VBG C30 C31 SING Y N 54 VBG C20 C19 SING Y N 55 VBG C20 F SING N N 56 VBG C2 H1 SING N N 57 VBG C3 H2 SING N N 58 VBG C5 H3 SING N N 59 VBG C29 H4 SING N N 60 VBG C30 H5 SING N N 61 VBG C31 H6 SING N N 62 VBG C26 H7 SING N N 63 VBG C26 H8 SING N N 64 VBG C H9 SING N N 65 VBG C22 H10 SING N N 66 VBG C21 H11 SING N N 67 VBG C19 H12 SING N N 68 VBG C18 H13 SING N N 69 VBG C9 H14 SING N N 70 VBG C9 H15 SING N N 71 VBG C8 H16 SING N N 72 VBG C8 H17 SING N N 73 VBG C7 H18 SING N N 74 VBG C7 H19 SING N N 75 VBG C14 H20 SING N N 76 VBG C14 H21 SING N N 77 VBG C13 H22 SING N N 78 VBG C13 H23 SING N N 79 VBG C16 H24 SING N N 80 VBG C16 H25 SING N N 81 VBG C16 H26 SING N N 82 VBG C12 H27 SING N N 83 VBG C12 H28 SING N N 84 VBG C11 H29 SING N N 85 VBG C11 H30 SING N N 86 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VBG SMILES ACDLabs 12.01 "O=C(N5CCN(C(N4CCC(c2ccc(C(OCc1c(F)cccc1C#N)(C(F)(F)F)C(F)(F)F)cc2)(S(=O)(=O)c3ccc(cc3)F)C4)=O)CC5)C" VBG InChI InChI 1.03 "InChI=1S/C34H30F8N4O5S/c1-22(47)44-15-17-45(18-16-44)30(48)46-14-13-31(21-46,52(49,50)27-11-9-26(35)10-12-27)24-5-7-25(8-6-24)32(33(37,38)39,34(40,41)42)51-20-28-23(19-43)3-2-4-29(28)36/h2-12H,13-18,20-21H2,1H3/t31-/m0/s1" VBG InChIKey InChI 1.03 QJQIXZIPDHUXKU-HKBQPEDESA-N VBG SMILES_CANONICAL CACTVS 3.385 "CC(=O)N1CCN(CC1)C(=O)N2CC[C@](C2)(c3ccc(cc3)C(OCc4c(F)cccc4C#N)(C(F)(F)F)C(F)(F)F)[S](=O)(=O)c5ccc(F)cc5" VBG SMILES CACTVS 3.385 "CC(=O)N1CCN(CC1)C(=O)N2CC[C](C2)(c3ccc(cc3)C(OCc4c(F)cccc4C#N)(C(F)(F)F)C(F)(F)F)[S](=O)(=O)c5ccc(F)cc5" VBG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)C(=O)N2CC[C@](C2)(c3ccc(cc3)C(C(F)(F)F)(C(F)(F)F)OCc4c(cccc4F)C#N)S(=O)(=O)c5ccc(cc5)F" VBG SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)C(=O)N2CCC(C2)(c3ccc(cc3)C(C(F)(F)F)(C(F)(F)F)OCc4c(cccc4F)C#N)S(=O)(=O)c5ccc(cc5)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VBG "SYSTEMATIC NAME" ACDLabs 12.01 "2-({[2-(4-{(3R)-1-(4-acetylpiperazine-1-carbonyl)-3-[(4-fluorophenyl)sulfonyl]pyrrolidin-3-yl}phenyl)-1,1,1,3,3,3-hexafluoropropan-2-yl]oxy}methyl)-3-fluorobenzonitrile" VBG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[2-[4-[(3~{R})-1-(4-ethanoylpiperazin-1-yl)carbonyl-3-(4-fluorophenyl)sulfonyl-pyrrolidin-3-yl]phenyl]-1,1,1,3,3,3-hexakis(fluoranyl)propan-2-yl]oxymethyl]-3-fluoranyl-benzenecarbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VBG "Create component" 2020-07-22 RCSB VBG "Initial release" 2020-08-12 RCSB ##