data_VBH # _chem_comp.id VBH _chem_comp.name "N-(2,2-diphenylethyl)-1,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]-6-oxidanylidene-pyridine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N-(2,2-diphenylethyl)-1,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)-6-oxo-1,6-dihydropyridine-3-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-04 _chem_comp.pdbx_modified_date 2021-07-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 417.500 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VBH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OER _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VBH N1 N1 N 0 1 N N N 39.767 19.671 8.357 0.060 -0.700 0.022 N1 VBH 1 VBH C4 C1 C 0 1 N N N 40.612 19.084 10.646 2.372 -0.152 -0.561 C4 VBH 2 VBH C5 C2 C 0 1 Y N N 40.197 18.367 11.927 3.809 -0.531 -0.312 C5 VBH 3 VBH C6 C3 C 0 1 Y N N 40.608 18.861 13.156 4.271 -0.675 0.983 C6 VBH 4 VBH C7 C4 C 0 1 Y N N 40.280 18.201 14.330 5.590 -1.023 1.211 C7 VBH 5 VBH C8 C5 C 0 1 Y N N 39.534 17.042 14.289 6.445 -1.227 0.144 C8 VBH 6 VBH C10 C6 C 0 1 Y N N 39.441 17.201 11.901 4.663 -0.742 -1.379 C10 VBH 7 VBH C13 C7 C 0 1 Y N N 43.829 17.192 9.872 2.404 3.171 1.230 C13 VBH 8 VBH C15 C8 C 0 1 Y N N 44.281 19.526 9.721 1.438 3.487 -0.938 C15 VBH 9 VBH C17 C9 C 0 1 N N N 40.175 19.352 7.113 -0.590 0.299 0.651 C17 VBH 10 VBH C20 C10 C 0 1 N N N 42.691 16.572 6.538 -3.776 1.720 -0.703 C20 VBH 11 VBH C21 C11 C 0 1 N N N 44.162 16.322 6.453 -4.255 2.799 -1.641 C21 VBH 12 VBH C22 C12 C 0 1 N N N 41.802 15.476 6.228 -4.704 0.889 -0.048 C22 VBH 13 VBH C24 C13 C 0 1 N N N 39.947 17.001 6.587 -2.970 -0.277 1.014 C24 VBH 14 VBH O2 O1 O 0 1 N N N 42.184 14.342 5.956 -5.898 1.046 -0.237 O2 VBH 15 VBH C19 C14 C 0 1 N N N 42.183 17.765 6.858 -2.446 1.540 -0.488 C19 VBH 16 VBH N2 N2 N 0 1 N N N 40.429 15.759 6.266 -4.282 -0.079 0.786 N2 VBH 17 VBH C23 C15 C 0 1 N N N 39.511 14.670 5.928 -5.267 -0.932 1.457 C23 VBH 18 VBH C18 C16 C 0 1 N N N 40.792 18.027 6.881 -2.026 0.519 0.398 C18 VBH 19 VBH O1 O2 O 0 1 N N N 40.028 20.109 6.159 0.007 1.019 1.428 O1 VBH 20 VBH C2 C17 C 0 1 N N N 39.191 20.985 8.569 -0.632 -1.500 -0.992 C2 VBH 21 VBH C1 C18 C 0 1 N N N 37.786 21.114 8.010 -1.175 -2.754 -0.357 C1 VBH 22 VBH O O3 O 0 1 N N N 37.185 20.121 7.607 -1.002 -2.959 0.826 O VBH 23 VBH N N3 N 0 1 N N N 37.254 22.330 7.989 -1.854 -3.648 -1.103 N VBH 24 VBH C C19 C 0 1 N N N 35.846 22.565 7.724 -2.382 -4.866 -0.486 C VBH 25 VBH C3 C20 C 0 1 N N N 39.664 18.739 9.488 1.461 -0.981 0.347 C3 VBH 26 VBH C11 C21 C 0 1 Y N N 42.063 18.778 10.291 2.180 1.312 -0.263 C11 VBH 27 VBH C16 C22 C 0 1 Y N N 42.965 19.804 10.051 1.614 2.143 -1.212 C16 VBH 28 VBH C14 C23 C 0 1 Y N N 44.713 18.222 9.629 1.834 4.001 0.282 C14 VBH 29 VBH C12 C24 C 0 1 Y N N 42.512 17.466 10.201 2.579 1.828 0.956 C12 VBH 30 VBH C9 C25 C 0 1 Y N N 39.114 16.545 13.075 5.982 -1.084 -1.150 C9 VBH 31 VBH H1 H1 H 0 1 N N N 40.533 20.166 10.828 2.120 -0.347 -1.604 H1 VBH 32 VBH H2 H2 H 0 1 N N N 41.190 19.770 13.199 3.603 -0.514 1.816 H2 VBH 33 VBH H3 H3 H 0 1 N N N 40.610 18.596 15.280 5.951 -1.134 2.222 H3 VBH 34 VBH H4 H4 H 0 1 N N N 39.280 16.527 15.204 7.475 -1.498 0.323 H4 VBH 35 VBH H5 H5 H 0 1 N N N 39.105 16.803 10.955 4.300 -0.634 -2.390 H5 VBH 36 VBH H6 H6 H 0 1 N N N 44.165 16.168 9.805 2.716 3.574 2.182 H6 VBH 37 VBH H7 H7 H 0 1 N N N 44.971 20.336 9.535 0.996 4.135 -1.680 H7 VBH 38 VBH H8 H8 H 0 1 N N N 44.706 17.241 6.715 -4.334 2.395 -2.650 H8 VBH 39 VBH H9 H9 H 0 1 N N N 44.439 15.520 7.153 -5.231 3.157 -1.315 H9 VBH 40 VBH H10 H10 H 0 1 N N N 44.424 16.020 5.428 -3.545 3.626 -1.636 H10 VBH 41 VBH H11 H11 H 0 1 N N N 38.880 17.168 6.607 -2.655 -1.057 1.691 H11 VBH 42 VBH H12 H12 H 0 1 N N N 42.863 18.565 7.110 -1.720 2.166 -0.987 H12 VBH 43 VBH H13 H13 H 0 1 N N N 38.474 15.029 5.998 -6.271 -0.632 1.158 H13 VBH 44 VBH H14 H14 H 0 1 N N N 39.712 14.327 4.902 -5.099 -1.972 1.176 H14 VBH 45 VBH H15 H15 H 0 1 N N N 39.658 13.836 6.629 -5.163 -0.826 2.537 H15 VBH 46 VBH H16 H16 H 0 1 N N N 39.833 21.732 8.080 -1.453 -0.921 -1.413 H16 VBH 47 VBH H17 H17 H 0 1 N N N 39.157 21.183 9.651 0.068 -1.767 -1.783 H17 VBH 48 VBH H18 H18 H 0 1 N N N 37.847 23.116 8.163 -1.993 -3.483 -2.049 H18 VBH 49 VBH H19 H19 H 0 1 N N N 35.641 23.645 7.759 -2.897 -5.462 -1.240 H19 VBH 50 VBH H20 H20 H 0 1 N N N 35.591 22.175 6.728 -1.561 -5.446 -0.064 H20 VBH 51 VBH H21 H21 H 0 1 N N N 35.239 22.052 8.485 -3.082 -4.599 0.306 H21 VBH 52 VBH H22 H22 H 0 1 N N N 38.631 18.759 9.865 1.651 -0.721 1.388 H22 VBH 53 VBH H23 H23 H 0 1 N N N 39.904 17.727 9.130 1.663 -2.041 0.194 H23 VBH 54 VBH H24 H24 H 0 1 N N N 42.638 20.831 10.122 1.310 1.742 -2.168 H24 VBH 55 VBH H25 H25 H 0 1 N N N 45.739 18.007 9.368 1.696 5.050 0.496 H25 VBH 56 VBH H26 H26 H 0 1 N N N 41.827 16.652 10.389 3.029 1.181 1.695 H26 VBH 57 VBH H27 H27 H 0 1 N N N 38.527 15.639 13.039 6.650 -1.248 -1.984 H27 VBH 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VBH C23 N2 SING N N 1 VBH O2 C22 DOUB N N 2 VBH O1 C17 DOUB N N 3 VBH C22 N2 SING N N 4 VBH C22 C20 SING N N 5 VBH N2 C24 SING N N 6 VBH C21 C20 SING N N 7 VBH C20 C19 DOUB N N 8 VBH C24 C18 DOUB N N 9 VBH C19 C18 SING N N 10 VBH C18 C17 SING N N 11 VBH C17 N1 SING N N 12 VBH O C1 DOUB N N 13 VBH C N SING N N 14 VBH N C1 SING N N 15 VBH C1 C2 SING N N 16 VBH N1 C2 SING N N 17 VBH N1 C3 SING N N 18 VBH C3 C4 SING N N 19 VBH C14 C15 DOUB Y N 20 VBH C14 C13 SING Y N 21 VBH C15 C16 SING Y N 22 VBH C13 C12 DOUB Y N 23 VBH C16 C11 DOUB Y N 24 VBH C12 C11 SING Y N 25 VBH C11 C4 SING N N 26 VBH C4 C5 SING N N 27 VBH C10 C5 DOUB Y N 28 VBH C10 C9 SING Y N 29 VBH C5 C6 SING Y N 30 VBH C9 C8 DOUB Y N 31 VBH C6 C7 DOUB Y N 32 VBH C8 C7 SING Y N 33 VBH C4 H1 SING N N 34 VBH C6 H2 SING N N 35 VBH C7 H3 SING N N 36 VBH C8 H4 SING N N 37 VBH C10 H5 SING N N 38 VBH C13 H6 SING N N 39 VBH C15 H7 SING N N 40 VBH C21 H8 SING N N 41 VBH C21 H9 SING N N 42 VBH C21 H10 SING N N 43 VBH C24 H11 SING N N 44 VBH C19 H12 SING N N 45 VBH C23 H13 SING N N 46 VBH C23 H14 SING N N 47 VBH C23 H15 SING N N 48 VBH C2 H16 SING N N 49 VBH C2 H17 SING N N 50 VBH N H18 SING N N 51 VBH C H19 SING N N 52 VBH C H20 SING N N 53 VBH C H21 SING N N 54 VBH C3 H22 SING N N 55 VBH C3 H23 SING N N 56 VBH C16 H24 SING N N 57 VBH C14 H25 SING N N 58 VBH C12 H26 SING N N 59 VBH C9 H27 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VBH InChI InChI 1.03 "InChI=1S/C25H27N3O3/c1-18-14-21(15-27(3)24(18)30)25(31)28(17-23(29)26-2)16-22(19-10-6-4-7-11-19)20-12-8-5-9-13-20/h4-15,22H,16-17H2,1-3H3,(H,26,29)" VBH InChIKey InChI 1.03 YSBWPORVNMMWTB-UHFFFAOYSA-N VBH SMILES_CANONICAL CACTVS 3.385 "CNC(=O)CN(CC(c1ccccc1)c2ccccc2)C(=O)C3=CN(C)C(=O)C(=C3)C" VBH SMILES CACTVS 3.385 "CNC(=O)CN(CC(c1ccccc1)c2ccccc2)C(=O)C3=CN(C)C(=O)C(=C3)C" VBH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=CN(C1=O)C)C(=O)N(CC(c2ccccc2)c3ccccc3)CC(=O)NC" VBH SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=CN(C1=O)C)C(=O)N(CC(c2ccccc2)c3ccccc3)CC(=O)NC" # _pdbx_chem_comp_identifier.comp_id VBH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(2,2-diphenylethyl)-1,5-dimethyl-~{N}-[2-(methylamino)-2-oxidanylidene-ethyl]-6-oxidanylidene-pyridine-3-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id VBH _pdbx_chem_comp_synonyms.name "N-(2,2-diphenylethyl)-1,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)-6-oxo-1,6-dihydropyridine-3-carboxamide" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VBH "Create component" 2021-05-04 PDBE VBH "Initial release" 2021-07-21 RCSB ##