data_VCL # _chem_comp.id VCL _chem_comp.name ;3-(1~{H}-imidazol-4-yl)propyl ~{N}'-[(4-chlorophenyl)methyl]carbamimidothioate ; _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H17 Cl N4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Clobenpropit _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-14 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 308.830 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VCL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8JXX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VCL C15 C1 C 0 1 Y N N N N N 136.645 146.196 110.216 -5.771 -0.475 -0.305 C15 VCL 1 VCL C16 C2 C 0 1 Y N N N N N 135.610 145.288 110.345 -6.981 -0.035 0.092 C16 VCL 2 VCL C18 C3 C 0 1 Y N N N N N 136.672 144.745 108.518 -6.878 -2.205 0.356 C18 VCL 3 VCL CL1 CL1 CL 0 0 N N N N N N 143.663 147.137 104.034 6.753 -1.860 -0.612 CL1 VCL 4 VCL C01 C4 C 0 1 Y N N N N N 141.689 145.351 107.044 4.450 1.066 0.831 C01 VCL 5 VCL C02 C5 C 0 1 Y N N N N N 142.008 145.869 105.785 5.545 0.340 0.402 C02 VCL 6 VCL C03 C6 C 0 1 Y N N N N N 143.239 146.479 105.610 5.378 -0.949 -0.071 C03 VCL 7 VCL C04 C7 C 0 1 Y N N N N N 144.143 146.578 106.654 4.115 -1.512 -0.114 C04 VCL 8 VCL C05 C8 C 0 1 Y N N N N N 143.795 146.049 107.903 3.020 -0.785 0.316 C05 VCL 9 VCL C06 C9 C 0 1 Y N N N N N 142.570 145.424 108.142 3.188 0.503 0.789 C06 VCL 10 VCL C07 C10 C 0 1 N N N N N N 142.204 144.841 109.529 1.995 1.292 1.263 C07 VCL 11 VCL N08 N1 N 0 1 N N N N N N 142.931 145.466 110.661 1.502 2.136 0.172 N08 VCL 12 VCL C09 C11 C 0 1 N N N N N N 142.609 146.617 111.145 0.314 1.931 -0.326 C09 VCL 13 VCL N10 N2 N 0 1 N N N N N N 143.290 147.192 112.205 -0.106 2.647 -1.423 N10 VCL 14 VCL S11 S1 S 0 1 N N N N N N 141.193 147.583 110.458 -0.754 0.737 0.408 S11 VCL 15 VCL C12 C12 C 0 1 N N N N N N 139.568 147.007 111.103 -2.252 1.011 -0.571 C12 VCL 16 VCL C13 C13 C 0 1 N N N N N N 138.407 147.891 110.674 -3.387 0.146 -0.020 C13 VCL 17 VCL C14 C14 C 0 1 N N N N N N 137.052 147.321 111.053 -4.653 0.378 -0.847 C14 VCL 18 VCL N17 N3 N 0 1 Y N N N N N 135.622 144.387 109.292 -7.683 -1.133 0.511 N17 VCL 19 VCL N19 N4 N 0 1 Y N N N N N 137.311 145.840 109.059 -5.734 -1.804 -0.127 N19 VCL 20 VCL H1 H1 H 0 1 N N N N N N 134.893 145.282 111.153 -7.329 0.987 0.081 H1 VCL 21 VCL H2 H2 H 0 1 N N N N N N 136.967 144.245 107.607 -7.135 -3.226 0.599 H2 VCL 22 VCL H3 H3 H 0 1 N N N N N N 140.729 144.876 107.181 4.580 2.071 1.205 H3 VCL 23 VCL H4 H4 H 0 1 N N N N N N 141.308 145.795 104.965 6.531 0.780 0.435 H4 VCL 24 VCL H5 H5 H 0 1 N N N N N N 145.101 147.055 106.508 3.984 -2.518 -0.483 H5 VCL 25 VCL H6 H6 H 0 1 N N N N N N 144.503 146.128 108.714 2.034 -1.224 0.283 H6 VCL 26 VCL H7 H7 H 0 1 N N N N N N 141.125 144.985 109.690 1.207 0.607 1.577 H7 VCL 27 VCL H8 H8 H 0 1 N N N N N N 142.434 143.765 109.523 2.286 1.920 2.105 H8 VCL 28 VCL H10 H10 H 0 1 N N N N N N 144.062 146.712 112.623 0.482 3.305 -1.826 H10 VCL 29 VCL H11 H11 H 0 1 N N N N N N 139.386 145.987 110.733 -2.536 2.062 -0.513 H11 VCL 30 VCL H12 H12 H 0 1 N N N N N N 139.612 146.996 112.202 -2.062 0.743 -1.610 H12 VCL 31 VCL H13 H13 H 0 1 N N N N N N 138.443 148.010 109.581 -3.103 -0.905 -0.077 H13 VCL 32 VCL H14 H14 H 0 1 N N N N N N 138.520 148.874 111.154 -3.578 0.414 1.019 H14 VCL 33 VCL H15 H15 H 0 1 N N N N N N 136.299 148.117 110.958 -4.463 0.109 -1.886 H15 VCL 34 VCL H16 H16 H 0 1 N N N N N N 137.096 146.981 112.098 -4.937 1.429 -0.790 H16 VCL 35 VCL H17 H17 H 0 1 N N N N N N 134.987 143.630 109.137 -8.591 -1.139 0.853 H17 VCL 36 VCL H9 H9 H 0 1 N N N N N N 143.010 148.087 112.553 -0.989 2.495 -1.793 H9 VCL 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VCL CL1 C03 SING N N 1 VCL C03 C02 DOUB Y N 2 VCL C03 C04 SING Y N 3 VCL C02 C01 SING Y N 4 VCL C04 C05 DOUB Y N 5 VCL C01 C06 DOUB Y N 6 VCL C05 C06 SING Y N 7 VCL C06 C07 SING N N 8 VCL C18 N19 DOUB Y N 9 VCL C18 N17 SING Y N 10 VCL N19 C15 SING Y N 11 VCL N17 C16 SING Y N 12 VCL C07 N08 SING N N 13 VCL C15 C16 DOUB Y N 14 VCL C15 C14 SING N N 15 VCL S11 C12 SING N N 16 VCL S11 C09 SING N N 17 VCL N08 C09 DOUB N N 18 VCL C13 C14 SING N N 19 VCL C13 C12 SING N N 20 VCL C09 N10 SING N N 21 VCL C16 H1 SING N N 22 VCL C18 H2 SING N N 23 VCL C01 H3 SING N N 24 VCL C02 H4 SING N N 25 VCL C04 H5 SING N N 26 VCL C05 H6 SING N N 27 VCL C07 H7 SING N N 28 VCL C07 H8 SING N N 29 VCL N10 H10 SING N N 30 VCL C12 H11 SING N N 31 VCL C12 H12 SING N N 32 VCL C13 H13 SING N N 33 VCL C13 H14 SING N N 34 VCL C14 H15 SING N N 35 VCL C14 H16 SING N N 36 VCL N17 H17 SING N N 37 VCL N10 H9 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VCL InChI InChI 1.06 "InChI=1S/C14H17ClN4S/c15-12-5-3-11(4-6-12)8-18-14(16)20-7-1-2-13-9-17-10-19-13/h3-6,9-10H,1-2,7-8H2,(H2,16,18)(H,17,19)" VCL InChIKey InChI 1.06 UCAIEVHKDLMIFL-UHFFFAOYSA-N VCL SMILES_CANONICAL CACTVS 3.385 "NC(SCCCc1c[nH]cn1)=NCc2ccc(Cl)cc2" VCL SMILES CACTVS 3.385 "NC(SCCCc1c[nH]cn1)=NCc2ccc(Cl)cc2" VCL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C/N=C(/N)\SCCCc2c[nH]cn2)Cl" VCL SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CN=C(N)SCCCc2c[nH]cn2)Cl" # _pdbx_chem_comp_identifier.comp_id VCL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier ;3-(1~{H}-imidazol-4-yl)propyl ~{N}'-[(4-chlorophenyl)methyl]carbamimidothioate ; # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VCL "Create component" 2023-07-14 PDBJ VCL "Initial release" 2024-03-20 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id VCL _pdbx_chem_comp_synonyms.name Clobenpropit _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #