data_VCO # _chem_comp.id VCO _chem_comp.name "ethyl (2Z)-(azepan-2-ylidene)(cyano)acetate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-29 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 208.257 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VCO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FKV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VCO N1 N1 N 0 1 N N N 42.450 24.628 23.240 0.325 3.465 -0.725 N1 VCO 1 VCO C7 C1 C 0 1 N N N 37.961 27.367 25.080 -3.858 -0.746 -0.384 C7 VCO 2 VCO C8 C2 C 0 1 N N N 38.531 28.407 26.010 -2.792 -1.803 -0.672 C8 VCO 3 VCO C9 C3 C 0 1 N N N 39.716 29.186 25.503 -1.862 -1.895 0.544 C9 VCO 4 VCO O1 O1 O 0 1 N N N 43.330 27.342 26.944 2.061 0.609 1.584 O1 VCO 5 VCO C1 C4 C 0 1 N N N 45.327 25.410 26.716 3.544 -0.975 0.102 C1 VCO 6 VCO C5 C5 C 0 1 N N N 40.169 27.166 23.883 -2.084 0.996 -0.255 C5 VCO 7 VCO C6 C6 C 0 1 N N N 38.977 26.436 24.443 -3.259 0.359 0.492 C6 VCO 8 VCO C4 C7 C 0 1 N N N 41.179 27.324 24.912 -0.804 0.280 0.066 C4 VCO 9 VCO C3 C8 C 0 1 N N N 42.233 26.482 24.994 0.363 1.016 0.047 C3 VCO 10 VCO C2 C9 C 0 1 N N N 43.310 26.528 26.025 1.625 0.400 0.468 C2 VCO 11 VCO C10 C10 C 0 1 N N N 42.340 25.463 24.012 0.342 2.382 -0.383 C10 VCO 12 VCO O O2 O 0 1 N N N 44.213 25.573 25.860 2.302 -0.398 -0.382 O VCO 13 VCO C C11 C 0 1 N N N 46.028 24.211 26.090 4.165 -1.844 -0.993 C VCO 14 VCO N N2 N 0 1 N N N 40.994 28.428 25.819 -0.714 -1.014 0.367 N VCO 15 VCO H1 H1 H 0 1 N N N 37.427 27.890 24.273 -4.207 -0.316 -1.323 H1 VCO 16 VCO H2 H2 H 0 1 N N N 37.250 26.753 25.652 -4.696 -1.208 0.138 H2 VCO 17 VCO H3 H3 H 0 1 N N N 37.731 29.127 26.237 -3.268 -2.768 -0.844 H3 VCO 18 VCO H4 H4 H 0 1 N N N 38.838 27.896 26.935 -2.218 -1.515 -1.552 H4 VCO 19 VCO H5 H5 H 0 1 N N N 39.744 30.171 25.992 -2.409 -1.600 1.440 H5 VCO 20 VCO H6 H6 H 0 1 N N N 39.629 29.319 24.415 -1.516 -2.922 0.657 H6 VCO 21 VCO H7 H7 H 0 1 N N N 45.972 26.301 26.707 4.236 -0.175 0.368 H7 VCO 22 VCO H8 H8 H 0 1 N N N 45.011 25.196 27.748 3.342 -1.587 0.981 H8 VCO 23 VCO H9 H9 H 0 1 N N N 40.589 26.590 23.045 -2.268 0.941 -1.328 H9 VCO 24 VCO H10 H10 H 0 1 N N N 39.855 28.158 23.525 -1.995 2.042 0.041 H10 VCO 25 VCO H11 H11 H 0 1 N N N 38.486 25.887 23.626 -4.016 1.115 0.695 H11 VCO 26 VCO H12 H12 H 0 1 N N N 39.327 25.724 25.205 -2.906 -0.070 1.430 H12 VCO 27 VCO H13 H13 H 0 1 N N N 46.932 23.970 26.669 3.473 -2.643 -1.259 H13 VCO 28 VCO H14 H14 H 0 1 N N N 45.349 23.346 26.094 4.366 -1.231 -1.872 H14 VCO 29 VCO H15 H15 H 0 1 N N N 46.310 24.451 25.054 5.097 -2.276 -0.630 H15 VCO 30 VCO H16 H16 H 0 1 N N N 40.943 28.078 26.754 0.172 -1.395 0.477 H16 VCO 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VCO N1 C10 TRIP N N 1 VCO C5 C6 SING N N 2 VCO C5 C4 SING N N 3 VCO C10 C3 SING N N 4 VCO C6 C7 SING N N 5 VCO C4 C3 DOUB N Z 6 VCO C4 N SING N N 7 VCO C3 C2 SING N N 8 VCO C7 C8 SING N N 9 VCO C9 N SING N N 10 VCO C9 C8 SING N N 11 VCO O C2 SING N N 12 VCO O C1 SING N N 13 VCO C2 O1 DOUB N N 14 VCO C C1 SING N N 15 VCO C7 H1 SING N N 16 VCO C7 H2 SING N N 17 VCO C8 H3 SING N N 18 VCO C8 H4 SING N N 19 VCO C9 H5 SING N N 20 VCO C9 H6 SING N N 21 VCO C1 H7 SING N N 22 VCO C1 H8 SING N N 23 VCO C5 H9 SING N N 24 VCO C5 H10 SING N N 25 VCO C6 H11 SING N N 26 VCO C6 H12 SING N N 27 VCO C H13 SING N N 28 VCO C H14 SING N N 29 VCO C H15 SING N N 30 VCO N H16 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VCO SMILES ACDLabs 12.01 "O=C(OCC)C(\C#N)=C1\CCCCCN1" VCO InChI InChI 1.06 "InChI=1S/C11H16N2O2/c1-2-15-11(14)9(8-12)10-6-4-3-5-7-13-10/h13H,2-7H2,1H3/b10-9-" VCO InChIKey InChI 1.06 OIIXRHZKCPKQIV-KTKRTIGZSA-N VCO SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)/C(C#N)=C1/CCCCCN1" VCO SMILES CACTVS 3.385 "CCOC(=O)C(C#N)=C1CCCCCN1" VCO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)/C(=C\1/CCCCCN1)/C#N" VCO SMILES "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C(=C1CCCCCN1)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VCO "SYSTEMATIC NAME" ACDLabs 12.01 "ethyl (2Z)-(azepan-2-ylidene)(cyano)acetate" VCO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "ethyl (2~{Z})-2-(azepan-2-ylidene)-2-cyano-ethanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VCO "Create component" 2022-08-29 RCSB VCO "Initial release" 2022-11-02 RCSB #