data_VCQ # _chem_comp.id VCQ _chem_comp.name "(2~{S})-2-cyclopentyl-2-oxidanyl-2-phenyl-ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H16 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-05 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 220.264 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VCQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OF8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VCQ C1 C1 C 0 1 N N N 3.607 -47.181 -7.492 -0.305 -1.938 -0.062 C1 VCQ 1 VCQ C10 C2 C 0 1 Y N N 2.087 -44.499 -4.604 3.172 0.960 0.984 C10 VCQ 2 VCQ C11 C3 C 0 1 Y N N 1.049 -44.813 -3.760 3.668 1.053 -0.303 C11 VCQ 3 VCQ C12 C4 C 0 1 Y N N 0.451 -46.039 -3.846 2.892 0.646 -1.373 C12 VCQ 4 VCQ C13 C5 C 0 1 Y N N 0.902 -46.966 -4.768 1.622 0.147 -1.155 C13 VCQ 5 VCQ C2 C6 C 0 1 N N S 2.467 -47.730 -6.605 -0.257 -0.495 0.369 C2 VCQ 6 VCQ C3 C7 C 0 1 N N N 1.459 -48.273 -7.573 -1.273 0.313 -0.441 C3 VCQ 7 VCQ C4 C8 C 0 1 N N N -0.003 -48.585 -7.195 -1.232 1.799 -0.029 C4 VCQ 8 VCQ C5 C9 C 0 1 N N N -0.561 -49.351 -8.400 -2.686 2.303 -0.058 C5 VCQ 9 VCQ C6 C10 C 0 1 N N N 0.554 -50.297 -8.744 -3.559 1.106 -0.487 C6 VCQ 10 VCQ C7 C11 C 0 1 N N N 1.810 -49.708 -8.082 -2.716 -0.136 -0.102 C7 VCQ 11 VCQ C8 C12 C 0 1 Y N N 1.937 -46.669 -5.638 1.126 0.055 0.132 C8 VCQ 12 VCQ C9 C13 C 0 1 Y N N 2.537 -45.427 -5.526 1.903 0.456 1.202 C9 VCQ 13 VCQ O1 O1 O 0 1 N N N 3.343 -46.257 -8.282 -0.479 -2.808 0.758 O1 VCQ 14 VCQ O2 O2 O 0 1 N N N 4.731 -47.701 -7.374 -0.158 -2.257 -1.358 O2 VCQ 15 VCQ O3 O3 O 0 1 N N N 2.971 -48.795 -5.838 -0.574 -0.402 1.759 O3 VCQ 16 VCQ H12 H1 H 0 1 N N N 2.552 -43.526 -4.547 3.778 1.278 1.820 H12 VCQ 17 VCQ H13 H2 H 0 1 N N N 0.707 -44.093 -3.031 4.661 1.442 -0.472 H13 VCQ 18 VCQ H14 H3 H 0 1 N N N -0.374 -46.284 -3.194 3.280 0.719 -2.378 H14 VCQ 19 VCQ H15 H4 H 0 1 N N N 0.438 -47.940 -4.810 1.016 -0.170 -1.991 H15 VCQ 20 VCQ H1 H5 H 0 1 N N N 1.440 -47.611 -8.451 -1.079 0.208 -1.508 H1 VCQ 21 VCQ H2 H6 H 0 1 N N N -0.568 -47.656 -7.031 -0.823 1.897 0.977 H2 VCQ 22 VCQ H3 H7 H 0 1 N N N -0.045 -49.205 -6.288 -0.626 2.366 -0.735 H3 VCQ 23 VCQ H5 H8 H 0 1 N N N -0.774 -48.670 -9.237 -2.982 2.645 0.933 H5 VCQ 24 VCQ H4 H9 H 0 1 N N N -1.476 -49.899 -8.131 -2.785 3.115 -0.778 H4 VCQ 25 VCQ H6 H10 H 0 1 N N N 0.344 -51.300 -8.345 -4.503 1.109 0.057 H6 VCQ 26 VCQ H7 H11 H 0 1 N N N 0.686 -50.356 -9.834 -3.736 1.129 -1.562 H7 VCQ 27 VCQ H9 H12 H 0 1 N N N 2.117 -50.340 -7.235 -3.003 -0.998 -0.703 H9 VCQ 28 VCQ H8 H13 H 0 1 N N N 2.628 -49.654 -8.815 -2.813 -0.354 0.961 H8 VCQ 29 VCQ H11 H14 H 0 1 N N N 3.369 -45.178 -6.168 1.520 0.375 2.208 H11 VCQ 30 VCQ H16 H15 H 0 1 N N N 5.338 -47.284 -7.974 -0.196 -3.196 -1.586 H16 VCQ 31 VCQ H10 H16 H 0 1 N N N 3.612 -48.465 -5.219 -0.562 0.500 2.106 H10 VCQ 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VCQ C6 C5 SING N N 1 VCQ C6 C7 SING N N 2 VCQ C5 C4 SING N N 3 VCQ O1 C1 DOUB N N 4 VCQ C7 C3 SING N N 5 VCQ C3 C4 SING N N 6 VCQ C3 C2 SING N N 7 VCQ C1 O2 SING N N 8 VCQ C1 C2 SING N N 9 VCQ C2 O3 SING N N 10 VCQ C2 C8 SING N N 11 VCQ C8 C9 DOUB Y N 12 VCQ C8 C13 SING Y N 13 VCQ C9 C10 SING Y N 14 VCQ C13 C12 DOUB Y N 15 VCQ C10 C11 DOUB Y N 16 VCQ C12 C11 SING Y N 17 VCQ C10 H12 SING N N 18 VCQ C11 H13 SING N N 19 VCQ C12 H14 SING N N 20 VCQ C13 H15 SING N N 21 VCQ C3 H1 SING N N 22 VCQ C4 H2 SING N N 23 VCQ C4 H3 SING N N 24 VCQ C5 H5 SING N N 25 VCQ C5 H4 SING N N 26 VCQ C6 H6 SING N N 27 VCQ C6 H7 SING N N 28 VCQ C7 H9 SING N N 29 VCQ C7 H8 SING N N 30 VCQ C9 H11 SING N N 31 VCQ O2 H16 SING N N 32 VCQ O3 H10 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VCQ InChI InChI 1.03 "InChI=1S/C13H16O3/c14-12(15)13(16,11-8-4-5-9-11)10-6-2-1-3-7-10/h1-3,6-7,11,16H,4-5,8-9H2,(H,14,15)/t13-/m1/s1" VCQ InChIKey InChI 1.03 WFLUEQCOAQCQLP-CYBMUJFWSA-N VCQ SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@](O)(C1CCCC1)c2ccccc2" VCQ SMILES CACTVS 3.385 "OC(=O)[C](O)(C1CCCC1)c2ccccc2" VCQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@@](C2CCCC2)(C(=O)O)O" VCQ SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(C2CCCC2)(C(=O)O)O" # _pdbx_chem_comp_identifier.comp_id VCQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-cyclopentyl-2-oxidanyl-2-phenyl-ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VCQ "Create component" 2021-05-05 PDBE VCQ "Initial release" 2022-11-02 RCSB #