data_VDS # _chem_comp.id VDS _chem_comp.name beta-D-allofuranose _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-30 _chem_comp.pdbx_modified_date 2021-05-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VDS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6X7T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VDS C4 C1 C 0 1 N N S 22.893 0.480 69.142 0.678 -1.078 0.232 C4 VDS 1 VDS C5 C2 C 0 1 N N R 23.783 -0.331 70.010 1.849 -0.137 0.607 C5 VDS 2 VDS C6 C3 C 0 1 N N R 23.029 -0.500 71.237 1.626 1.058 -0.355 C6 VDS 3 VDS C1 C4 C 0 1 N N N 20.215 -0.435 67.512 -2.687 0.720 -0.387 C1 VDS 4 VDS C2 C5 C 0 1 N N R 20.933 -0.969 68.740 -1.677 -0.202 0.300 C2 VDS 5 VDS C3 C6 C 0 1 N N R 21.483 0.070 69.637 -0.346 -0.152 -0.453 C3 VDS 6 VDS O1 O1 O 0 1 N N N 21.691 -0.480 70.996 0.189 1.182 -0.411 O1 VDS 7 VDS O2 O2 O 0 1 N N N 23.505 -1.051 72.287 2.213 2.248 0.176 O2 VDS 8 VDS O3 O3 O 0 1 N N N 25.060 0.259 70.308 3.108 -0.765 0.356 O3 VDS 9 VDS O4 O4 O 0 1 N N N 23.028 1.871 69.487 1.121 -2.090 -0.674 O4 VDS 10 VDS O5 O5 O 0 1 N N N 21.621 -2.113 68.696 -2.176 -1.541 0.296 O5 VDS 11 VDS O6 O6 O 0 1 N N N 19.444 0.686 67.699 -3.891 0.763 0.380 O6 VDS 12 VDS H5 H1 H 0 1 N N N 23.031 0.273 68.071 0.247 -1.529 1.125 H5 VDS 13 VDS H6 H2 H 0 1 N N N 23.935 -1.314 69.540 1.775 0.181 1.647 H6 VDS 14 VDS H7 H3 H 0 1 N N N 23.115 0.543 71.577 2.033 0.838 -1.342 H7 VDS 15 VDS H1 H4 H 0 1 N N N 19.560 -1.233 67.133 -2.269 1.723 -0.464 H1 VDS 16 VDS H2 H5 H 0 1 N N N 20.977 -0.196 66.756 -2.905 0.340 -1.385 H2 VDS 17 VDS H3 H6 H 0 1 N N N 20.061 -1.280 69.334 -1.526 0.126 1.328 H3 VDS 18 VDS H4 H7 H 0 1 N N N 20.825 0.951 69.667 -0.493 -0.462 -1.487 H4 VDS 19 VDS H8 H8 H 0 1 N N N 22.844 -1.057 72.969 2.103 3.026 -0.387 H8 VDS 20 VDS H9 H9 H 0 1 N N N 25.558 -0.327 70.865 3.872 -0.215 0.576 H9 VDS 21 VDS H10 H10 H 0 1 N N N 23.880 2.186 69.208 1.767 -2.702 -0.296 H10 VDS 22 VDS H11 H11 H 0 1 N N N 22.000 -2.288 69.549 -2.334 -1.900 -0.588 H11 VDS 23 VDS H12 H12 H 0 1 N N N 19.042 0.935 66.875 -4.578 1.330 0.003 H12 VDS 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VDS C1 O6 SING N N 1 VDS C1 C2 SING N N 2 VDS O5 C2 SING N N 3 VDS C2 C3 SING N N 4 VDS C4 O4 SING N N 5 VDS C4 C3 SING N N 6 VDS C4 C5 SING N N 7 VDS C3 O1 SING N N 8 VDS C5 O3 SING N N 9 VDS C5 C6 SING N N 10 VDS O1 C6 SING N N 11 VDS C6 O2 SING N N 12 VDS C4 H5 SING N N 13 VDS C5 H6 SING N N 14 VDS C6 H7 SING N N 15 VDS C1 H1 SING N N 16 VDS C1 H2 SING N N 17 VDS C2 H3 SING N N 18 VDS C3 H4 SING N N 19 VDS O2 H8 SING N N 20 VDS O3 H9 SING N N 21 VDS O4 H10 SING N N 22 VDS O5 H11 SING N N 23 VDS O6 H12 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VDS SMILES ACDLabs 12.01 "C1(O)C(C(CO)O)OC(C1O)O" VDS InChI InChI 1.03 "InChI=1S/C6H12O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2-11H,1H2/t2-,3+,4-,5-,6-/m1/s1" VDS InChIKey InChI 1.03 AVVWPBAENSWJCB-AIECOIEWSA-N VDS SMILES_CANONICAL CACTVS 3.385 "OC[C@@H](O)[C@H]1O[C@@H](O)[C@H](O)[C@@H]1O" VDS SMILES CACTVS 3.385 "OC[CH](O)[CH]1O[CH](O)[CH](O)[CH]1O" VDS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]([C@@H]1[C@H]([C@H]([C@@H](O1)O)O)O)O)O" VDS SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C1C(C(C(O1)O)O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VDS "SYSTEMATIC NAME" ACDLabs 12.01 beta-D-allofuranose VDS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{S},5~{R})-5-[(1~{R})-1,2-bis(oxidanyl)ethyl]oxolane-2,3,4-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VDS "Create component" 2020-07-30 RCSB VDS "Initial release" 2021-06-02 RCSB ##