data_VEJ # _chem_comp.id VEJ _chem_comp.name "N-(4-tert-butylphenyl)-N-[(1R)-2-[(3-methoxypropyl)amino]-2-oxo-1-(pyridin-3-yl)ethyl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H33 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-05 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 411.537 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VEJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RL1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VEJ N1 N1 N 0 1 N N N N N N 8.407 1.677 22.929 2.992 -0.144 0.345 N1 VEJ 1 VEJ C4 C1 C 0 1 N N N N N N 8.488 0.977 21.797 1.831 -0.787 0.113 C4 VEJ 2 VEJ C5 C2 C 0 1 N N N N N N 9.410 2.665 23.312 4.104 -0.276 -0.599 C5 VEJ 3 VEJ C6 C3 C 0 1 N N N N N N 10.777 2.039 23.555 5.292 0.554 -0.107 C6 VEJ 4 VEJ C7 C4 C 0 1 N N N N N N 11.875 3.031 23.855 6.454 0.416 -1.094 C7 VEJ 5 VEJ C8 C5 C 0 1 N N N N N N 13.305 4.635 22.906 8.707 1.131 -1.488 C8 VEJ 6 VEJ C10 C6 C 0 1 Y N N N N N 7.282 -0.103 18.959 -0.220 1.464 0.090 C10 VEJ 7 VEJ C13 C7 C 0 1 Y N N N N N 5.526 0.989 20.109 0.420 1.478 2.391 C13 VEJ 8 VEJ C15 C8 C 0 1 Y N N N N N 10.179 -1.760 21.741 -1.979 -0.792 -1.145 C15 VEJ 9 VEJ C17 C9 C 0 1 Y N N N N N 11.436 -2.031 23.791 -3.943 0.473 -0.620 C17 VEJ 10 VEJ C20 C10 C 0 1 N N N N N N 12.778 -2.063 24.535 -5.205 1.165 -1.065 C20 VEJ 11 VEJ C21 C11 C 0 1 N N N N N N 13.967 -2.279 23.589 -5.359 1.022 -2.580 C21 VEJ 12 VEJ C22 C12 C 0 1 N N N N N N 12.802 -3.187 25.584 -6.409 0.528 -0.368 C22 VEJ 13 VEJ O1 O1 O 0 1 N N N N N N 9.387 1.154 20.985 1.707 -1.475 -0.878 O1 VEJ 14 VEJ O2 O2 O 0 1 N N N N N N 12.013 4.039 22.876 7.563 1.191 -0.634 O2 VEJ 15 VEJ C3 C13 C 0 1 N N R N N N 7.370 -0.039 21.504 0.687 -0.652 1.085 C3 VEJ 16 VEJ C9 C14 C 0 1 Y N N N N N 6.692 0.238 20.170 0.286 0.797 1.190 C9 VEJ 17 VEJ C12 C15 C 0 1 Y N N N N N 5.020 1.387 18.886 0.038 2.809 2.441 C12 VEJ 18 VEJ C11 C16 C 0 1 Y N N N N N 5.705 1.014 17.743 -0.451 3.413 1.297 C11 VEJ 19 VEJ N2 N2 N 0 1 Y N N N N N 6.822 0.281 17.762 -0.569 2.734 0.174 N2 VEJ 20 VEJ N N3 N 0 1 N N N N N N 7.741 -1.457 21.783 -0.453 -1.441 0.610 N VEJ 21 VEJ C2 C17 C 0 1 N N N N N N 6.875 -2.466 21.457 -0.372 -2.785 0.572 C2 VEJ 22 VEJ O O3 O 0 1 N N N N N N 5.739 -2.237 21.079 0.670 -3.339 0.852 O VEJ 23 VEJ C1 C18 C 0 1 N N N N N N 7.309 -3.899 21.666 -1.577 -3.602 0.180 C1 VEJ 24 VEJ C C19 C 0 1 N N N N N N 8.302 -4.475 20.633 -1.262 -5.089 0.350 C VEJ 25 VEJ C14 C20 C 0 1 Y N N N N N 8.987 -1.710 22.458 -1.625 -0.798 0.197 C14 VEJ 26 VEJ C19 C21 C 0 1 Y N N N N N 9.023 -1.846 23.845 -2.436 -0.164 1.129 C19 VEJ 27 VEJ C18 C22 C 0 1 Y N N N N N 10.236 -2.013 24.497 -3.592 0.470 0.718 C18 VEJ 28 VEJ C23 C23 C 0 1 N N N N N N 12.987 -0.719 25.226 -5.130 2.649 -0.697 C23 VEJ 29 VEJ C16 C24 C 0 1 Y N N N N N 11.385 -1.915 22.403 -3.137 -0.157 -1.550 C16 VEJ 30 VEJ H1 H1 H 0 1 N N N N N N 7.630 1.519 23.538 3.091 0.409 1.136 H1 VEJ 31 VEJ H2 H2 H 0 1 N N N N N N 9.500 3.408 22.506 4.398 -1.323 -0.671 H2 VEJ 32 VEJ H3 H3 H 0 1 N N N N N N 9.080 3.164 24.235 3.792 0.083 -1.580 H3 VEJ 33 VEJ H4 H4 H 0 1 N N N N N N 10.693 1.351 24.409 4.999 1.601 -0.035 H4 VEJ 34 VEJ H5 H5 H 0 1 N N N N N N 11.061 1.474 22.655 5.604 0.195 0.874 H5 VEJ 35 VEJ H6 H6 H 0 1 N N N N N N 12.827 2.484 23.927 6.747 -0.631 -1.166 H6 VEJ 36 VEJ H7 H7 H 0 1 N N N N N N 11.655 3.512 24.820 6.142 0.775 -2.075 H7 VEJ 37 VEJ H8 H8 H 0 1 N N N N N N 13.369 5.412 22.130 9.505 1.745 -1.071 H8 VEJ 38 VEJ H9 H9 H 0 1 N N N N N N 13.477 5.088 23.894 9.047 0.098 -1.569 H9 VEJ 39 VEJ H10 H10 H 0 1 N N N N N N 14.068 3.865 22.718 8.442 1.504 -2.478 H10 VEJ 40 VEJ H11 H11 H 0 1 N N N N N N 8.169 -0.718 18.985 -0.327 0.942 -0.849 H11 VEJ 41 VEJ H12 H12 H 0 1 N N N N N N 5.013 1.263 21.019 0.812 0.982 3.266 H12 VEJ 42 VEJ H13 H13 H 0 1 N N N N N N 10.163 -1.678 20.664 -1.348 -1.280 -1.873 H13 VEJ 43 VEJ H14 H14 H 0 1 N N N N N N 14.901 -2.294 24.170 -5.412 -0.035 -2.842 H14 VEJ 44 VEJ H15 H15 H 0 1 N N N N N N 13.847 -3.238 23.063 -6.272 1.523 -2.902 H15 VEJ 45 VEJ H16 H16 H 0 1 N N N N N N 14.005 -1.460 22.855 -4.501 1.476 -3.077 H16 VEJ 46 VEJ H17 H17 H 0 1 N N N N N N 11.959 -3.059 26.279 -6.300 0.630 0.712 H17 VEJ 47 VEJ H18 H18 H 0 1 N N N N N N 12.717 -4.161 25.080 -7.322 1.029 -0.690 H18 VEJ 48 VEJ H19 H19 H 0 1 N N N N N N 13.748 -3.146 26.144 -6.463 -0.529 -0.629 H19 VEJ 49 VEJ H20 H20 H 0 1 N N N N N N 6.597 0.194 22.251 0.998 -1.015 2.064 H20 VEJ 50 VEJ H21 H21 H 0 1 N N N N N N 4.115 1.973 18.824 0.128 3.370 3.359 H21 VEJ 51 VEJ H22 H22 H 0 1 N N N N N N 5.317 1.332 16.787 -0.747 4.451 1.327 H22 VEJ 52 VEJ H23 H23 H 0 1 N N N N N N 6.406 -4.528 21.649 -2.420 -3.333 0.817 H23 VEJ 53 VEJ H24 H24 H 0 1 N N N N N N 7.782 -3.964 22.657 -1.829 -3.400 -0.861 H24 VEJ 54 VEJ H25 H25 H 0 1 N N N N N N 8.539 -5.517 20.893 -0.419 -5.357 -0.287 H25 VEJ 55 VEJ H26 H26 H 0 1 N N N N N N 7.850 -4.441 19.631 -1.010 -5.291 1.391 H26 VEJ 56 VEJ H27 H27 H 0 1 N N N N N N 9.225 -3.877 20.639 -2.133 -5.680 0.067 H27 VEJ 57 VEJ H28 H28 H 0 1 N N N N N N 8.105 -1.821 24.413 -2.164 -0.167 2.174 H28 VEJ 58 VEJ H29 H29 H 0 1 N N N N N N 10.250 -2.131 25.570 -4.224 0.963 1.442 H29 VEJ 59 VEJ H30 H30 H 0 1 N N N N N N 12.152 -0.527 25.916 -4.273 3.103 -1.194 H30 VEJ 60 VEJ H31 H31 H 0 1 N N N N N N 13.931 -0.740 25.790 -6.043 3.149 -1.019 H31 VEJ 61 VEJ H32 H32 H 0 1 N N N N N N 13.029 0.079 24.470 -5.021 2.751 0.382 H32 VEJ 62 VEJ H33 H33 H 0 1 N N N N N N 12.302 -1.947 21.834 -3.413 -0.152 -2.594 H33 VEJ 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VEJ C11 N2 DOUB Y N 1 VEJ C11 C12 SING Y N 2 VEJ N2 C10 SING Y N 3 VEJ C12 C13 DOUB Y N 4 VEJ C10 C9 DOUB Y N 5 VEJ C13 C9 SING Y N 6 VEJ C9 C3 SING N N 7 VEJ C C1 SING N N 8 VEJ O1 C4 DOUB N N 9 VEJ O C2 DOUB N N 10 VEJ C2 C1 SING N N 11 VEJ C2 N SING N N 12 VEJ C3 N SING N N 13 VEJ C3 C4 SING N N 14 VEJ C15 C16 DOUB Y N 15 VEJ C15 C14 SING Y N 16 VEJ N C14 SING N N 17 VEJ C4 N1 SING N N 18 VEJ C16 C17 SING Y N 19 VEJ C14 C19 DOUB Y N 20 VEJ O2 C8 SING N N 21 VEJ O2 C7 SING N N 22 VEJ N1 C5 SING N N 23 VEJ C5 C6 SING N N 24 VEJ C6 C7 SING N N 25 VEJ C21 C20 SING N N 26 VEJ C17 C18 DOUB Y N 27 VEJ C17 C20 SING N N 28 VEJ C19 C18 SING Y N 29 VEJ C20 C23 SING N N 30 VEJ C20 C22 SING N N 31 VEJ N1 H1 SING N N 32 VEJ C5 H2 SING N N 33 VEJ C5 H3 SING N N 34 VEJ C6 H4 SING N N 35 VEJ C6 H5 SING N N 36 VEJ C7 H6 SING N N 37 VEJ C7 H7 SING N N 38 VEJ C8 H8 SING N N 39 VEJ C8 H9 SING N N 40 VEJ C8 H10 SING N N 41 VEJ C10 H11 SING N N 42 VEJ C13 H12 SING N N 43 VEJ C15 H13 SING N N 44 VEJ C21 H14 SING N N 45 VEJ C21 H15 SING N N 46 VEJ C21 H16 SING N N 47 VEJ C22 H17 SING N N 48 VEJ C22 H18 SING N N 49 VEJ C22 H19 SING N N 50 VEJ C3 H20 SING N N 51 VEJ C12 H21 SING N N 52 VEJ C11 H22 SING N N 53 VEJ C1 H23 SING N N 54 VEJ C1 H24 SING N N 55 VEJ C H25 SING N N 56 VEJ C H26 SING N N 57 VEJ C H27 SING N N 58 VEJ C19 H28 SING N N 59 VEJ C18 H29 SING N N 60 VEJ C23 H30 SING N N 61 VEJ C23 H31 SING N N 62 VEJ C23 H32 SING N N 63 VEJ C16 H33 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VEJ SMILES ACDLabs 12.01 "N(CCCOC)C(=O)C(N(c1ccc(cc1)C(C)(C)C)C(CC)=O)c2cnccc2" VEJ InChI InChI 1.03 "InChI=1S/C24H33N3O3/c1-6-21(28)27(20-12-10-19(11-13-20)24(2,3)4)22(18-9-7-14-25-17-18)23(29)26-15-8-16-30-5/h7,9-14,17,22H,6,8,15-16H2,1-5H3,(H,26,29)/t22-/m1/s1" VEJ InChIKey InChI 1.03 BWBBQIUIWNQPIO-JOCHJYFZSA-N VEJ SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N([C@@H](C(=O)NCCCOC)c1cccnc1)c2ccc(cc2)C(C)(C)C" VEJ SMILES CACTVS 3.385 "CCC(=O)N([CH](C(=O)NCCCOC)c1cccnc1)c2ccc(cc2)C(C)(C)C" VEJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(c1ccc(cc1)C(C)(C)C)[C@H](c2cccnc2)C(=O)NCCCOC" VEJ SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(c1ccc(cc1)C(C)(C)C)C(c2cccnc2)C(=O)NCCCOC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VEJ "SYSTEMATIC NAME" ACDLabs 12.01 "N-(4-tert-butylphenyl)-N-[(1R)-2-[(3-methoxypropyl)amino]-2-oxo-1-(pyridin-3-yl)ethyl]propanamide" VEJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(4-~{tert}-butylphenyl)-~{N}-[(1~{R})-2-(3-methoxypropylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VEJ "Create component" 2020-08-05 RCSB VEJ "Initial release" 2020-12-02 RCSB VEJ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id VEJ _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #