data_VFN # _chem_comp.id VFN _chem_comp.name "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H16 Cl N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-18 _chem_comp.pdbx_modified_date 2021-10-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 413.881 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VFN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OK1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VFN C15 C1 C 0 1 N N N -31.629 7.759 37.793 -6.370 -2.833 0.992 C15 VFN 1 VFN C23 C2 C 0 1 Y N N -37.198 8.423 33.303 4.559 -0.259 2.222 C23 VFN 2 VFN C24 C3 C 0 1 Y N N -38.165 7.600 32.700 5.645 -1.077 1.969 C24 VFN 3 VFN C11 C4 C 0 1 Y N N -30.481 9.150 36.158 -4.547 -2.287 -0.554 C11 VFN 4 VFN C13 C5 C 0 1 Y N N -32.805 8.521 35.802 -5.385 -0.589 0.944 C13 VFN 5 VFN C10 C6 C 0 1 Y N N -30.472 9.870 34.962 -3.647 -1.378 -1.069 C10 VFN 6 VFN C14 C7 C 0 1 Y N N -32.787 9.213 34.590 -4.483 0.311 0.417 C14 VFN 7 VFN C22 C8 C 0 1 Y N N -36.518 9.377 32.536 3.444 -0.317 1.410 C22 VFN 8 VFN C25 C9 C 0 1 Y N N -38.464 7.745 31.338 5.622 -1.951 0.898 C25 VFN 9 VFN C12 C10 C 0 1 Y N N -31.641 8.490 36.573 -5.428 -1.897 0.457 C12 VFN 10 VFN C9 C11 C 0 1 Y N N -31.630 9.896 34.178 -3.614 -0.083 -0.585 C9 VFN 11 VFN C21 C12 C 0 1 Y N N -36.800 9.535 31.169 3.416 -1.194 0.333 C21 VFN 12 VFN C26 C13 C 0 1 Y N N -37.784 8.711 30.593 4.512 -2.011 0.077 C26 VFN 13 VFN C5 C14 C 0 1 Y N N -33.732 12.273 34.716 -0.588 3.027 0.342 C5 VFN 14 VFN C2 C15 C 0 1 Y N N -35.191 11.529 36.051 0.830 4.572 -0.155 C2 VFN 15 VFN C17 C16 C 0 1 N N N -33.688 10.818 31.695 -0.401 0.008 -0.757 C17 VFN 16 VFN C8 C17 C 0 1 N N N -31.602 10.700 32.926 -2.631 0.906 -1.157 C8 VFN 17 VFN C6 C18 C 0 1 N N N -33.161 12.615 33.393 -1.204 1.722 0.777 C6 VFN 18 VFN C19 C19 C 0 1 N N N -34.901 11.623 31.281 0.881 -0.046 0.032 C19 VFN 19 VFN N16 N1 N 0 1 N N N -31.613 7.162 38.788 -7.117 -3.576 1.416 N16 VFN 20 VFN N4 N2 N 0 1 Y N N -33.195 12.348 35.917 -1.230 4.096 -0.026 N4 VFN 21 VFN N3 N3 N 0 1 Y N N -34.154 11.864 36.797 -0.389 5.023 -0.324 N3 VFN 22 VFN N1 N4 N 0 1 N N N -36.404 10.993 36.385 2.001 5.274 -0.373 N1 VFN 23 VFN N7 N5 N 0 1 N N N -32.852 11.393 32.660 -1.384 0.854 -0.389 N7 VFN 24 VFN O18 O1 O 0 1 N N N -33.460 9.724 31.196 -0.550 -0.711 -1.723 O18 VFN 25 VFN O28 O2 O 0 1 Y N N -34.995 11.765 34.720 0.730 3.299 0.270 O28 VFN 26 VFN S20 S1 S 0 1 N N N -35.977 10.721 30.112 1.995 -1.272 -0.707 S20 VFN 27 VFN CL1 CL1 CL 0 0 N N N -38.141 8.920 28.924 4.483 -3.109 -1.267 CL1 VFN 28 VFN H1 H1 H 0 1 N N N -36.980 8.320 34.356 4.581 0.422 3.060 H1 VFN 29 VFN H2 H2 H 0 1 N N N -38.679 6.854 33.288 6.514 -1.032 2.609 H2 VFN 30 VFN H3 H3 H 0 1 N N N -29.589 9.103 36.765 -4.575 -3.298 -0.935 H3 VFN 31 VFN H4 H4 H 0 1 N N N -33.701 8.020 36.137 -6.063 -0.280 1.726 H4 VFN 32 VFN H5 H5 H 0 1 N N N -29.585 10.399 34.647 -2.965 -1.679 -1.851 H5 VFN 33 VFN H6 H6 H 0 1 N N N -33.668 9.224 33.965 -4.449 1.323 0.793 H6 VFN 34 VFN H7 H7 H 0 1 N N N -35.768 9.999 33.001 2.594 0.318 1.611 H7 VFN 35 VFN H8 H8 H 0 1 N N N -39.210 7.118 30.871 6.472 -2.587 0.702 H8 VFN 36 VFN H9 H9 H 0 1 N N N -31.390 10.026 32.083 -2.428 0.656 -2.198 H9 VFN 37 VFN H10 H10 H 0 1 N N N -30.799 11.447 33.009 -3.051 1.911 -1.099 H10 VFN 38 VFN H11 H11 H 0 1 N N N -32.240 13.200 33.532 -0.549 1.233 1.497 H11 VFN 39 VFN H12 H12 H 0 1 N N N -33.890 13.209 32.823 -2.173 1.914 1.239 H12 VFN 40 VFN H13 H13 H 0 1 N N N -34.560 12.552 30.801 1.359 0.934 0.017 H13 VFN 41 VFN H14 H14 H 0 1 N N N -35.485 11.868 32.180 0.663 -0.327 1.062 H14 VFN 42 VFN H15 H15 H 0 1 N N N -36.952 10.865 35.558 1.965 6.193 -0.683 H15 VFN 43 VFN H16 H16 H 0 1 N N N -36.266 10.110 36.833 2.858 4.848 -0.218 H16 VFN 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VFN CL1 C26 SING N N 1 VFN S20 C21 SING N N 2 VFN S20 C19 SING N N 3 VFN C26 C21 DOUB Y N 4 VFN C26 C25 SING Y N 5 VFN C21 C22 SING Y N 6 VFN O18 C17 DOUB N N 7 VFN C19 C17 SING N N 8 VFN C25 C24 DOUB Y N 9 VFN C17 N7 SING N N 10 VFN C22 C23 DOUB Y N 11 VFN N7 C8 SING N N 12 VFN N7 C6 SING N N 13 VFN C24 C23 SING Y N 14 VFN C8 C9 SING N N 15 VFN C6 C5 SING N N 16 VFN C9 C14 DOUB Y N 17 VFN C9 C10 SING Y N 18 VFN C14 C13 SING Y N 19 VFN C5 O28 SING Y N 20 VFN C5 N4 DOUB Y N 21 VFN O28 C2 SING Y N 22 VFN C10 C11 DOUB Y N 23 VFN C13 C12 DOUB Y N 24 VFN N4 N3 SING Y N 25 VFN C2 N1 SING N N 26 VFN C2 N3 DOUB Y N 27 VFN C11 C12 SING Y N 28 VFN C12 C15 SING N N 29 VFN C15 N16 TRIP N N 30 VFN C23 H1 SING N N 31 VFN C24 H2 SING N N 32 VFN C11 H3 SING N N 33 VFN C13 H4 SING N N 34 VFN C10 H5 SING N N 35 VFN C14 H6 SING N N 36 VFN C22 H7 SING N N 37 VFN C25 H8 SING N N 38 VFN C8 H9 SING N N 39 VFN C8 H10 SING N N 40 VFN C6 H11 SING N N 41 VFN C6 H12 SING N N 42 VFN C19 H13 SING N N 43 VFN C19 H14 SING N N 44 VFN N1 H15 SING N N 45 VFN N1 H16 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VFN InChI InChI 1.03 "InChI=1S/C19H16ClN5O2S/c20-15-3-1-2-4-16(15)28-12-18(26)25(11-17-23-24-19(22)27-17)10-14-7-5-13(9-21)6-8-14/h1-8H,10-12H2,(H2,22,24)" VFN InChIKey InChI 1.03 DDHNQWBEECYOFY-UHFFFAOYSA-N VFN SMILES_CANONICAL CACTVS 3.385 "Nc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1" VFN SMILES CACTVS 3.385 "Nc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1" VFN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)N)Cl" VFN SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)N)Cl" # _pdbx_chem_comp_identifier.comp_id VFN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VFN "Create component" 2021-05-18 PDBE VFN "Initial release" 2021-10-13 RCSB ##