data_VFZ # _chem_comp.id VFZ _chem_comp.name "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(6-oxidanylidene-1~{H}-pyridin-3-yl)methyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 Cl N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-18 _chem_comp.pdbx_modified_date 2021-10-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.859 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VFZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OKB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VFZ CL CL1 CL 0 0 N N N -37.415 50.163 29.603 4.640 2.725 1.231 CL VFZ 1 VFZ C16 C1 C 0 1 Y N N -35.699 50.384 29.577 4.570 1.577 -0.069 C16 VFZ 2 VFZ C15 C2 C 0 1 Y N N -34.921 49.485 30.278 5.685 1.351 -0.853 C15 VFZ 3 VFZ C14 C3 C 0 1 Y N N -33.565 49.718 30.406 5.629 0.436 -1.889 C14 VFZ 4 VFZ C13 C4 C 0 1 Y N N -33.004 50.828 29.833 4.459 -0.253 -2.146 C13 VFZ 5 VFZ C12 C5 C 0 1 Y N N -33.781 51.708 29.097 3.340 -0.032 -1.367 C12 VFZ 6 VFZ C11 C6 C 0 1 Y N N -35.151 51.492 28.951 3.392 0.881 -0.321 C11 VFZ 7 VFZ S S1 S 0 1 N N N -36.214 52.561 28.021 1.967 1.166 0.675 S VFZ 8 VFZ C10 C7 C 0 1 N N N -35.133 53.937 27.674 0.732 0.056 -0.053 C10 VFZ 9 VFZ C9 C8 C 0 1 N N N -34.235 53.403 26.574 -0.567 0.185 0.701 C9 VFZ 10 VFZ O1 O1 O 0 1 N N N -34.516 52.350 26.029 -0.650 0.951 1.638 O1 VFZ 11 VFZ N3 N1 N 0 1 N N N -33.210 54.174 26.155 -1.635 -0.550 0.335 N3 VFZ 12 VFZ C2 C9 C 0 1 N N N -32.833 55.405 26.823 -1.535 -1.475 -0.797 C2 VFZ 13 VFZ C1 C10 C 0 1 Y N N -33.591 56.538 26.222 -1.090 -2.828 -0.302 C1 VFZ 14 VFZ N2 N2 N 0 1 Y N N -33.134 57.352 25.347 -1.866 -3.796 0.088 N2 VFZ 15 VFZ N1 N3 N 0 1 Y N N -34.233 57.754 24.567 -1.150 -4.804 0.443 N1 VFZ 16 VFZ O2 O2 O 0 1 Y N N -34.950 56.423 26.180 0.183 -3.256 -0.190 O2 VFZ 17 VFZ C C11 C 0 1 Y N N -35.267 57.172 25.093 0.118 -4.511 0.290 C VFZ 18 VFZ N N4 N 0 1 N N N -36.529 57.152 24.673 1.190 -5.339 0.567 N VFZ 19 VFZ C3 C12 C 0 1 N N N -32.610 53.943 24.857 -2.897 -0.425 1.068 C3 VFZ 20 VFZ C4 C13 C 0 1 N N N -31.131 53.674 24.881 -3.740 0.654 0.437 C4 VFZ 21 VFZ C8 C14 C 0 1 N N N -30.293 54.016 23.751 -3.547 1.995 0.797 C8 VFZ 22 VFZ C7 C15 C 0 1 N N N -28.941 53.839 23.796 -4.318 2.958 0.216 C7 VFZ 23 VFZ C6 C16 C 0 1 N N N -28.311 53.299 24.975 -5.289 2.585 -0.730 C6 VFZ 24 VFZ O O3 O 0 1 N N N -27.077 53.167 25.149 -5.985 3.437 -1.257 O VFZ 25 VFZ N4 N5 N 0 1 N N N -29.167 52.966 25.995 -5.450 1.288 -1.054 N4 VFZ 26 VFZ C5 C17 C 0 1 N N N -30.519 53.149 25.957 -4.679 0.329 -0.481 C5 VFZ 27 VFZ H1 H1 H 0 1 N N N -35.368 48.608 30.722 6.601 1.888 -0.655 H1 VFZ 28 VFZ H2 H2 H 0 1 N N N -32.948 49.025 30.958 6.503 0.261 -2.500 H2 VFZ 29 VFZ H3 H3 H 0 1 N N N -31.948 51.019 29.956 4.419 -0.965 -2.957 H3 VFZ 30 VFZ H4 H4 H 0 1 N N N -33.322 52.568 28.633 2.426 -0.571 -1.568 H4 VFZ 31 VFZ H5 H5 H 0 1 N N N -34.547 54.212 28.563 0.573 0.324 -1.098 H5 VFZ 32 VFZ H6 H6 H 0 1 N N N -35.705 54.810 27.327 1.086 -0.973 0.008 H6 VFZ 33 VFZ H7 H7 H 0 1 N N N -33.070 55.330 27.894 -2.508 -1.566 -1.279 H7 VFZ 34 VFZ H8 H8 H 0 1 N N N -31.754 55.576 26.698 -0.808 -1.094 -1.514 H8 VFZ 35 VFZ H9 H9 H 0 1 N N N -36.608 57.682 23.829 1.037 -6.234 0.908 H9 VFZ 36 VFZ H10 H10 H 0 1 N N N -36.808 56.207 24.500 2.096 -5.025 0.419 H10 VFZ 37 VFZ H11 H11 H 0 1 N N N -32.785 54.834 24.236 -3.434 -1.373 1.033 H11 VFZ 38 VFZ H12 H12 H 0 1 N N N -33.108 53.075 24.400 -2.690 -0.163 2.106 H12 VFZ 39 VFZ H13 H13 H 0 1 N N N -30.746 54.418 22.857 -2.796 2.262 1.525 H13 VFZ 40 VFZ H14 H14 H 0 1 N N N -28.337 54.106 22.941 -4.184 3.997 0.480 H14 VFZ 41 VFZ H16 H16 H 0 1 N N N -31.113 52.865 26.813 -4.821 -0.706 -0.757 H16 VFZ 42 VFZ H15 H15 H 0 1 N N N -28.774 52.562 26.821 -6.122 1.037 -1.707 H15 VFZ 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VFZ C8 C7 DOUB N N 1 VFZ C8 C4 SING N N 2 VFZ C7 C6 SING N N 3 VFZ N1 C DOUB Y N 4 VFZ N1 N2 SING Y N 5 VFZ N C SING N N 6 VFZ C3 C4 SING N N 7 VFZ C3 N3 SING N N 8 VFZ C4 C5 DOUB N N 9 VFZ C6 O DOUB N N 10 VFZ C6 N4 SING N N 11 VFZ C O2 SING Y N 12 VFZ N2 C1 DOUB Y N 13 VFZ C5 N4 SING N N 14 VFZ O1 C9 DOUB N N 15 VFZ N3 C9 SING N N 16 VFZ N3 C2 SING N N 17 VFZ O2 C1 SING Y N 18 VFZ C1 C2 SING N N 19 VFZ C9 C10 SING N N 20 VFZ C10 S SING N N 21 VFZ S C11 SING N N 22 VFZ C11 C12 DOUB Y N 23 VFZ C11 C16 SING Y N 24 VFZ C12 C13 SING Y N 25 VFZ C16 CL SING N N 26 VFZ C16 C15 DOUB Y N 27 VFZ C13 C14 DOUB Y N 28 VFZ C15 C14 SING Y N 29 VFZ C15 H1 SING N N 30 VFZ C14 H2 SING N N 31 VFZ C13 H3 SING N N 32 VFZ C12 H4 SING N N 33 VFZ C10 H5 SING N N 34 VFZ C10 H6 SING N N 35 VFZ C2 H7 SING N N 36 VFZ C2 H8 SING N N 37 VFZ N H9 SING N N 38 VFZ N H10 SING N N 39 VFZ C3 H11 SING N N 40 VFZ C3 H12 SING N N 41 VFZ C8 H13 SING N N 42 VFZ C7 H14 SING N N 43 VFZ C5 H16 SING N N 44 VFZ N4 H15 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VFZ InChI InChI 1.03 "InChI=1S/C17H16ClN5O3S/c18-12-3-1-2-4-13(12)27-10-16(25)23(9-15-21-22-17(19)26-15)8-11-5-6-14(24)20-7-11/h1-7H,8-10H2,(H2,19,22)(H,20,24)" VFZ InChIKey InChI 1.03 YRQRMFRLHMFRAP-UHFFFAOYSA-N VFZ SMILES_CANONICAL CACTVS 3.385 "Nc1oc(CN(CC2=CNC(=O)C=C2)C(=O)CSc3ccccc3Cl)nn1" VFZ SMILES CACTVS 3.385 "Nc1oc(CN(CC2=CNC(=O)C=C2)C(=O)CSc3ccccc3Cl)nn1" VFZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)SCC(=O)N(Cc2nnc(o2)N)CC3=CNC(=O)C=C3)Cl" VFZ SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)SCC(=O)N(Cc2nnc(o2)N)CC3=CNC(=O)C=C3)Cl" # _pdbx_chem_comp_identifier.comp_id VFZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(6-oxidanylidene-1~{H}-pyridin-3-yl)methyl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VFZ "Create component" 2021-05-18 PDBE VFZ "Initial release" 2021-10-06 RCSB ##