data_VGJ # _chem_comp.id VGJ _chem_comp.name "(3R,7S,11S)-3,7,11,15-tetramethylhexadecanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H40 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-06-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 312.530 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VGJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WM4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VGJ O1 O1 O 0 1 N N N -1.373 8.762 -15.801 9.719 -0.432 -0.308 O1 VGJ 1 VGJ C15 C15 C 0 1 N N N -1.929 8.912 -14.665 8.504 0.004 0.059 C15 VGJ 2 VGJ O2 O2 O 0 1 N N N -1.406 9.684 -13.818 8.400 0.978 0.767 O2 VGJ 3 VGJ C14 C14 C 0 1 N N N -3.217 8.137 -14.278 7.269 -0.720 -0.413 C14 VGJ 4 VGJ C13 C13 C 0 1 N N R -4.528 8.940 -13.968 6.026 -0.024 0.144 C13 VGJ 5 VGJ C16 C16 C 0 1 N N N -4.302 10.125 -13.017 6.011 -0.148 1.669 C16 VGJ 6 VGJ C12 C12 C 0 1 N N N -5.745 8.071 -13.509 4.771 -0.682 -0.434 C12 VGJ 7 VGJ C11 C11 C 0 1 N N N -6.375 8.396 -12.115 3.533 0.092 0.024 C11 VGJ 8 VGJ C10 C10 C 0 1 N N N -7.864 8.052 -11.854 2.278 -0.566 -0.554 C10 VGJ 9 VGJ C9 C9 C 0 1 N N S -8.121 6.845 -10.921 1.040 0.207 -0.097 C9 VGJ 10 VGJ C17 C17 C 0 1 N N N -7.995 7.182 -9.431 1.069 1.616 -0.693 C17 VGJ 11 VGJ C8 C8 C 0 1 N N N -9.476 6.187 -11.239 -0.220 -0.521 -0.570 C8 VGJ 12 VGJ C7 C7 C 0 1 N N N -9.818 4.844 -10.554 -1.457 0.183 -0.008 C7 VGJ 13 VGJ C6 C6 C 0 1 N N N -10.717 3.930 -11.431 -2.717 -0.545 -0.481 C6 VGJ 14 VGJ C5 C5 C 0 1 N N S -11.970 3.278 -10.811 -3.954 0.158 0.081 C5 VGJ 15 VGJ C18 C18 C 0 1 N N N -12.688 4.198 -9.849 -4.053 1.566 -0.511 C18 VGJ 16 VGJ C4 C4 C 0 1 N N N -13.071 2.942 -11.825 -5.206 -0.640 -0.288 C4 VGJ 17 VGJ C3 C3 C 0 1 N N N -12.728 2.410 -13.216 -6.429 -0.006 0.378 C3 VGJ 18 VGJ C2 C2 C 0 1 N N N -13.937 1.667 -13.785 -7.681 -0.804 0.009 C2 VGJ 19 VGJ C1 C1 C 0 1 N N N -13.780 1.303 -15.242 -8.904 -0.170 0.674 C1 VGJ 20 VGJ C19 C19 C 0 1 N N N -14.059 2.496 -16.146 -9.131 1.229 0.098 C19 VGJ 21 VGJ C20 C20 C 0 1 N N N -14.597 0.068 -15.624 -10.136 -1.038 0.408 C20 VGJ 22 VGJ H1 H1 H 0 1 N N N -0.588 9.295 -15.843 10.481 0.065 0.019 H1 VGJ 23 VGJ H141 H141 H 0 0 N N N -3.450 7.479 -15.128 7.235 -0.709 -1.502 H141 VGJ 24 VGJ H142 H142 H 0 0 N N N -2.964 7.657 -13.321 7.296 -1.751 -0.061 H142 VGJ 25 VGJ H13 H13 H 0 1 N N N -4.810 9.347 -14.950 6.044 1.030 -0.134 H13 VGJ 26 VGJ H161 H161 H 0 0 N N N -4.248 9.759 -11.981 5.993 -1.202 1.947 H161 VGJ 27 VGJ H162 H162 H 0 0 N N N -3.360 10.629 -13.277 6.905 0.320 2.080 H162 VGJ 28 VGJ H163 H163 H 0 0 N N N -5.137 10.835 -13.112 5.125 0.348 2.066 H163 VGJ 29 VGJ H121 H121 H 0 0 N N N -6.538 8.209 -14.259 4.824 -0.672 -1.522 H121 VGJ 30 VGJ H122 H122 H 0 0 N N N -5.348 7.050 -13.413 4.707 -1.712 -0.083 H122 VGJ 31 VGJ H111 H111 H 0 0 N N N -5.793 7.829 -11.374 3.480 0.082 1.112 H111 VGJ 32 VGJ H112 H112 H 0 0 N N N -6.342 9.494 -12.058 3.598 1.122 -0.327 H112 VGJ 33 VGJ H101 H101 H 0 0 N N N -8.329 8.933 -11.388 2.331 -0.556 -1.643 H101 VGJ 34 VGJ H102 H102 H 0 0 N N N -8.287 7.775 -12.831 2.214 -1.596 -0.203 H102 VGJ 35 VGJ H9 H9 H 0 1 N N N -7.320 6.119 -11.127 1.034 0.273 0.992 H9 VGJ 36 VGJ H171 H171 H 0 0 N N N -7.965 6.251 -8.845 0.187 2.167 -0.367 H171 VGJ 37 VGJ H172 H172 H 0 0 N N N -7.070 7.752 -9.261 1.967 2.135 -0.356 H172 VGJ 38 VGJ H173 H173 H 0 0 N N N -8.860 7.784 -9.117 1.075 1.550 -1.781 H173 VGJ 39 VGJ H81C H81C H 0 0 N N N -10.253 6.903 -10.933 -0.259 -0.509 -1.659 H81C VGJ 40 VGJ H82C H82C H 0 0 N N N -9.421 5.945 -12.311 -0.197 -1.552 -0.218 H82C VGJ 41 VGJ H71C H71C H 0 0 N N N -8.878 4.311 -10.349 -1.418 0.171 1.081 H71C VGJ 42 VGJ H72C H72C H 0 0 N N N -10.375 5.073 -9.634 -1.479 1.214 -0.359 H72C VGJ 43 VGJ H61C H61C H 0 0 N N N -11.074 4.556 -12.262 -2.755 -0.534 -1.570 H61C VGJ 44 VGJ H62C H62C H 0 0 N N N -10.068 3.076 -11.676 -2.694 -1.577 -0.129 H62C VGJ 45 VGJ H5 H5 H 0 1 N N N -11.549 2.379 -10.338 -3.872 0.225 1.166 H5 VGJ 46 VGJ H181 H181 H 0 0 N N N -12.862 3.672 -8.899 -4.934 2.067 -0.111 H181 VGJ 47 VGJ H182 H182 H 0 0 N N N -12.071 5.090 -9.666 -3.161 2.134 -0.248 H182 VGJ 48 VGJ H183 H183 H 0 0 N N N -13.653 4.501 -10.282 -4.135 1.499 -1.596 H183 VGJ 49 VGJ H41C H41C H 0 0 N N N -13.686 2.163 -11.351 -5.336 -0.632 -1.370 H41C VGJ 50 VGJ H42C H42C H 0 0 N N N -13.520 3.923 -12.038 -5.096 -1.668 0.057 H42C VGJ 51 VGJ H31C H31C H 0 0 N N N -12.468 3.250 -13.877 -6.299 -0.014 1.460 H31C VGJ 52 VGJ H32C H32C H 0 0 N N N -11.872 1.722 -13.147 -6.538 1.022 0.033 H32C VGJ 53 VGJ H21C H21C H 0 0 N N N -14.072 0.739 -13.211 -7.811 -0.796 -1.074 H21C VGJ 54 VGJ H22C H22C H 0 0 N N N -14.804 2.340 -13.706 -7.571 -1.832 0.354 H22C VGJ 55 VGJ HA HA H 0 1 N N N -12.727 1.025 -15.398 -8.736 -0.098 1.749 HA VGJ 56 VGJ H191 H191 H 0 0 N N N -14.126 3.410 -15.538 -9.299 1.156 -0.977 H191 VGJ 57 VGJ H192 H192 H 0 0 N N N -13.243 2.601 -16.876 -10.003 1.680 0.572 H192 VGJ 58 VGJ H193 H193 H 0 0 N N N -15.009 2.339 -16.677 -8.254 1.846 0.287 H193 VGJ 59 VGJ H201 H201 H 0 0 N N N -14.793 0.078 -16.706 -9.974 -2.034 0.819 H201 VGJ 60 VGJ H202 H202 H 0 0 N N N -14.034 -0.840 -15.362 -11.008 -0.586 0.883 H202 VGJ 61 VGJ H203 H203 H 0 0 N N N -15.552 0.077 -15.078 -10.304 -1.110 -0.666 H203 VGJ 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VGJ O1 C15 SING N N 1 VGJ C15 O2 DOUB N N 2 VGJ C15 C14 SING N N 3 VGJ C14 C13 SING N N 4 VGJ C13 C16 SING N N 5 VGJ C13 C12 SING N N 6 VGJ C12 C11 SING N N 7 VGJ C11 C10 SING N N 8 VGJ C10 C9 SING N N 9 VGJ C9 C17 SING N N 10 VGJ C9 C8 SING N N 11 VGJ C8 C7 SING N N 12 VGJ C7 C6 SING N N 13 VGJ C6 C5 SING N N 14 VGJ C5 C18 SING N N 15 VGJ C5 C4 SING N N 16 VGJ C4 C3 SING N N 17 VGJ C3 C2 SING N N 18 VGJ C2 C1 SING N N 19 VGJ C1 C19 SING N N 20 VGJ C1 C20 SING N N 21 VGJ O1 H1 SING N N 22 VGJ C14 H141 SING N N 23 VGJ C14 H142 SING N N 24 VGJ C13 H13 SING N N 25 VGJ C16 H161 SING N N 26 VGJ C16 H162 SING N N 27 VGJ C16 H163 SING N N 28 VGJ C12 H121 SING N N 29 VGJ C12 H122 SING N N 30 VGJ C11 H111 SING N N 31 VGJ C11 H112 SING N N 32 VGJ C10 H101 SING N N 33 VGJ C10 H102 SING N N 34 VGJ C9 H9 SING N N 35 VGJ C17 H171 SING N N 36 VGJ C17 H172 SING N N 37 VGJ C17 H173 SING N N 38 VGJ C8 H81C SING N N 39 VGJ C8 H82C SING N N 40 VGJ C7 H71C SING N N 41 VGJ C7 H72C SING N N 42 VGJ C6 H61C SING N N 43 VGJ C6 H62C SING N N 44 VGJ C5 H5 SING N N 45 VGJ C18 H181 SING N N 46 VGJ C18 H182 SING N N 47 VGJ C18 H183 SING N N 48 VGJ C4 H41C SING N N 49 VGJ C4 H42C SING N N 50 VGJ C3 H31C SING N N 51 VGJ C3 H32C SING N N 52 VGJ C2 H21C SING N N 53 VGJ C2 H22C SING N N 54 VGJ C1 HA SING N N 55 VGJ C19 H191 SING N N 56 VGJ C19 H192 SING N N 57 VGJ C19 H193 SING N N 58 VGJ C20 H201 SING N N 59 VGJ C20 H202 SING N N 60 VGJ C20 H203 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VGJ SMILES ACDLabs 10.04 "O=C(O)CC(CCCC(C)CCCC(C)CCCC(C)C)C" VGJ SMILES_CANONICAL CACTVS 3.352 "CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@@H](C)CC(O)=O" VGJ SMILES CACTVS 3.352 "CC(C)CCC[CH](C)CCC[CH](C)CCC[CH](C)CC(O)=O" VGJ SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@@H](C)CC(=O)O" VGJ SMILES "OpenEye OEToolkits" 1.6.1 "CC(C)CCCC(C)CCCC(C)CCCC(C)CC(=O)O" VGJ InChI InChI 1.03 "InChI=1S/C20H40O2/c1-16(2)9-6-10-17(3)11-7-12-18(4)13-8-14-19(5)15-20(21)22/h16-19H,6-15H2,1-5H3,(H,21,22)/t17-,18-,19+/m0/s1" VGJ InChIKey InChI 1.03 RLCKHJSFHOZMDR-GBESFXJTSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VGJ "SYSTEMATIC NAME" ACDLabs 10.04 "(3R,7S,11S)-3,7,11,15-tetramethylhexadecanoic acid" VGJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(3R,7S,11S)-3,7,11,15-tetramethylhexadecanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VGJ "Create component" 2009-06-30 EBI VGJ "Modify descriptor" 2011-06-04 RCSB #