data_VGW # _chem_comp.id VGW _chem_comp.name "2-chloranyl-4-[[4-[2-(5-cyclopropylpyrimidin-2-yl)propan-2-ylamino]-1-methyl-2-oxidanylidene-quinolin-6-yl]amino]pyridine-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H24 Cl N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-18 _chem_comp.pdbx_modified_date 2021-12-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 485.968 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VGW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OKD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VGW C1 C1 C 0 1 Y N N -25.542 9.793 16.649 -2.747 -1.505 -0.438 C1 VGW 1 VGW C2 C2 C 0 1 Y N N -24.997 10.954 17.182 -1.375 -1.371 -0.309 C2 VGW 2 VGW C3 C3 C 0 1 Y N N -23.980 10.883 18.131 -0.585 -2.510 -0.147 C3 VGW 3 VGW C4 C4 C 0 1 Y N N -23.510 9.633 18.546 -1.183 -3.782 -0.117 C4 VGW 4 VGW N1 N1 N 0 1 N N N -23.912 13.237 18.283 1.504 -1.181 -0.031 N1 VGW 5 VGW C5 C5 C 0 1 Y N N -24.071 8.477 18.018 -2.562 -3.897 -0.248 C5 VGW 6 VGW C6 C6 C 0 1 N N N -21.854 10.679 20.037 0.943 -4.802 0.170 C6 VGW 7 VGW C7 C7 C 0 1 N N N -22.349 11.972 19.607 1.596 -3.563 0.147 C7 VGW 8 VGW C8 C8 C 0 1 N N N -23.373 12.086 18.712 0.875 -2.408 -0.007 C8 VGW 9 VGW C9 C9 C 0 1 N N N -23.297 14.554 18.519 2.963 -1.103 0.077 C9 VGW 10 VGW C10 C10 C 0 1 Y N N -21.835 14.585 18.064 3.395 0.339 0.004 C10 VGW 11 VGW C11 C11 C 0 1 Y N N -20.241 13.996 16.591 2.822 2.554 -0.200 C11 VGW 12 VGW C12 C12 C 0 1 Y N N -19.256 14.586 17.364 4.163 2.897 -0.126 C12 VGW 13 VGW C13 C13 C 0 1 Y N N -19.719 15.191 18.521 5.096 1.883 0.022 C13 VGW 14 VGW C14 C14 C 0 1 N N N -17.787 14.541 16.997 4.595 4.339 -0.199 C14 VGW 15 VGW N2 N2 N 0 1 Y N N -21.537 13.977 16.912 2.480 1.277 -0.132 N2 VGW 16 VGW C15 C15 C 0 1 N N N -17.066 15.759 16.494 5.534 4.737 -1.340 C15 VGW 17 VGW C16 C16 C 0 1 N N N -17.331 14.639 15.569 6.064 4.651 0.094 C16 VGW 18 VGW C17 C17 C 0 1 N N N -23.462 14.896 20.000 3.408 -1.702 1.413 C17 VGW 19 VGW C18 C18 C 0 1 N N N -24.034 15.591 17.673 3.602 -1.886 -1.072 C18 VGW 20 VGW C19 C19 C 0 1 N N N -21.993 8.241 19.887 -1.018 -6.228 0.074 C19 VGW 21 VGW C20 C20 C 0 1 Y N N -26.300 9.548 14.341 -3.279 0.780 0.124 C20 VGW 22 VGW C21 C21 C 0 1 Y N N -25.087 8.996 13.938 -2.322 0.779 1.139 C21 VGW 23 VGW C22 C22 C 0 1 Y N N -24.903 8.694 12.604 -2.086 1.940 1.843 C22 VGW 24 VGW N3 N3 N 0 1 Y N N -20.999 15.208 18.901 4.679 0.628 0.082 N3 VGW 25 VGW CL CL1 CL 0 0 N N N -28.147 9.681 10.802 -4.502 4.601 0.334 CL VGW 26 VGW C23 C23 C 0 1 Y N N -26.967 9.424 12.041 -3.663 3.110 0.628 C23 VGW 27 VGW N5 N4 N 0 1 Y N N -25.823 8.897 11.655 -2.748 3.051 1.575 N5 VGW 28 VGW C24 C24 C 0 1 Y N N -27.277 9.778 13.348 -3.964 1.983 -0.141 C24 VGW 29 VGW C25 C25 C 0 1 N N N -28.522 10.393 13.702 -4.957 2.046 -1.170 C25 VGW 30 VGW N6 N5 N 0 1 N N N -29.523 10.887 13.941 -5.745 2.095 -1.987 N6 VGW 31 VGW N4 N6 N 0 1 N N N -26.517 9.898 15.660 -3.545 -0.367 -0.607 N4 VGW 32 VGW O O1 O 0 1 N N N -20.948 10.527 20.847 1.604 -5.818 0.309 O VGW 33 VGW N N7 N 0 1 N N N -22.470 9.555 19.474 -0.391 -4.904 0.043 N VGW 34 VGW C C26 C 0 1 Y N N -25.080 8.557 17.077 -3.335 -2.767 -0.408 C VGW 35 VGW H1 H1 H 0 1 N N N -25.364 11.917 16.859 -0.920 -0.393 -0.333 H1 VGW 36 VGW H2 H2 H 0 1 N N N -24.823 13.282 18.692 0.980 -0.370 -0.119 H2 VGW 37 VGW H3 H3 H 0 1 N N N -23.717 7.510 18.345 -3.028 -4.871 -0.226 H3 VGW 38 VGW H4 H4 H 0 1 N N N -21.896 12.868 20.005 2.670 -3.517 0.252 H4 VGW 39 VGW H5 H5 H 0 1 N N N -19.942 13.520 15.669 2.067 3.318 -0.310 H5 VGW 40 VGW H6 H6 H 0 1 N N N -18.997 15.681 19.158 6.149 2.113 0.083 H6 VGW 41 VGW H7 H7 H 0 1 N N N -17.180 13.876 17.629 3.852 5.069 0.120 H7 VGW 42 VGW H8 H8 H 0 1 N N N -16.038 15.964 16.827 5.839 3.957 -2.037 H8 VGW 43 VGW H9 H9 H 0 1 N N N -17.609 16.708 16.376 5.408 5.730 -1.771 H9 VGW 44 VGW H10 H10 H 0 1 N N N -18.071 14.756 14.764 6.287 5.588 0.605 H10 VGW 45 VGW H11 H11 H 0 1 N N N -16.500 14.012 15.215 6.718 3.814 0.339 H11 VGW 46 VGW H12 H12 H 0 1 N N N -22.932 14.150 20.610 2.967 -2.691 1.532 H12 VGW 47 VGW H13 H13 H 0 1 N N N -23.042 15.894 20.195 4.495 -1.784 1.429 H13 VGW 48 VGW H14 H14 H 0 1 N N N -24.531 14.890 20.261 3.080 -1.056 2.227 H14 VGW 49 VGW H15 H15 H 0 1 N N N -25.096 15.611 17.960 3.404 -1.375 -2.014 H15 VGW 50 VGW H16 H16 H 0 1 N N N -23.590 16.583 17.841 4.678 -1.951 -0.912 H16 VGW 51 VGW H17 H17 H 0 1 N N N -23.947 15.325 16.609 3.178 -2.890 -1.107 H17 VGW 52 VGW H18 H18 H 0 1 N N N -21.178 8.359 20.616 -1.071 -6.629 -0.938 H18 VGW 53 VGW H19 H19 H 0 1 N N N -22.819 7.679 20.348 -0.424 -6.896 0.699 H19 VGW 54 VGW H20 H20 H 0 1 N N N -21.622 7.693 19.008 -2.024 -6.144 0.485 H20 VGW 55 VGW H21 H21 H 0 1 N N N -24.304 8.807 14.657 -1.772 -0.122 1.370 H21 VGW 56 VGW H22 H22 H 0 1 N N N -23.956 8.267 12.308 -1.345 1.941 2.629 H22 VGW 57 VGW H23 H23 H 0 1 N N N -27.419 10.244 15.917 -4.284 -0.382 -1.234 H23 VGW 58 VGW H24 H24 H 0 1 N N N -25.511 7.653 16.673 -4.406 -2.861 -0.509 H24 VGW 59 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VGW CL C23 SING N N 1 VGW N5 C23 DOUB Y N 2 VGW N5 C22 SING Y N 3 VGW C23 C24 SING Y N 4 VGW C22 C21 DOUB Y N 5 VGW C24 C25 SING N N 6 VGW C24 C20 DOUB Y N 7 VGW C25 N6 TRIP N N 8 VGW C21 C20 SING Y N 9 VGW C20 N4 SING N N 10 VGW C16 C15 SING N N 11 VGW C16 C14 SING N N 12 VGW N4 C1 SING N N 13 VGW C15 C14 SING N N 14 VGW C11 N2 DOUB Y N 15 VGW C11 C12 SING Y N 16 VGW C1 C DOUB Y N 17 VGW C1 C2 SING Y N 18 VGW N2 C10 SING Y N 19 VGW C14 C12 SING N N 20 VGW C C5 SING Y N 21 VGW C2 C3 DOUB Y N 22 VGW C12 C13 DOUB Y N 23 VGW C18 C9 SING N N 24 VGW C5 C4 DOUB Y N 25 VGW C10 C9 SING N N 26 VGW C10 N3 DOUB Y N 27 VGW C3 C4 SING Y N 28 VGW C3 C8 SING N N 29 VGW N1 C9 SING N N 30 VGW N1 C8 SING N N 31 VGW C9 C17 SING N N 32 VGW C13 N3 SING Y N 33 VGW C4 N SING N N 34 VGW C8 C7 DOUB N N 35 VGW N C19 SING N N 36 VGW N C6 SING N N 37 VGW C7 C6 SING N N 38 VGW C6 O DOUB N N 39 VGW C2 H1 SING N N 40 VGW N1 H2 SING N N 41 VGW C5 H3 SING N N 42 VGW C7 H4 SING N N 43 VGW C11 H5 SING N N 44 VGW C13 H6 SING N N 45 VGW C14 H7 SING N N 46 VGW C15 H8 SING N N 47 VGW C15 H9 SING N N 48 VGW C16 H10 SING N N 49 VGW C16 H11 SING N N 50 VGW C17 H12 SING N N 51 VGW C17 H13 SING N N 52 VGW C17 H14 SING N N 53 VGW C18 H15 SING N N 54 VGW C18 H16 SING N N 55 VGW C18 H17 SING N N 56 VGW C19 H18 SING N N 57 VGW C19 H19 SING N N 58 VGW C19 H20 SING N N 59 VGW C21 H21 SING N N 60 VGW C22 H22 SING N N 61 VGW N4 H23 SING N N 62 VGW C H24 SING N N 63 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VGW InChI InChI 1.03 "InChI=1S/C26H24ClN7O/c1-26(2,25-30-13-16(14-31-25)15-4-5-15)33-21-11-23(35)34(3)22-7-6-17(10-18(21)22)32-20-8-9-29-24(27)19(20)12-28/h6-11,13-15,33H,4-5H2,1-3H3,(H,29,32)" VGW InChIKey InChI 1.03 NSEPTCJLWMVQFB-UHFFFAOYSA-N VGW SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)C=C(NC(C)(C)c2ncc(cn2)C3CC3)c4cc(Nc5ccnc(Cl)c5C#N)ccc14" VGW SMILES CACTVS 3.385 "CN1C(=O)C=C(NC(C)(C)c2ncc(cn2)C3CC3)c4cc(Nc5ccnc(Cl)c5C#N)ccc14" VGW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(c1ncc(cn1)C2CC2)NC3=CC(=O)N(c4c3cc(cc4)Nc5ccnc(c5C#N)Cl)C" VGW SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(c1ncc(cn1)C2CC2)NC3=CC(=O)N(c4c3cc(cc4)Nc5ccnc(c5C#N)Cl)C" # _pdbx_chem_comp_identifier.comp_id VGW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-chloranyl-4-[[4-[2-(5-cyclopropylpyrimidin-2-yl)propan-2-ylamino]-1-methyl-2-oxidanylidene-quinolin-6-yl]amino]pyridine-3-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VGW "Create component" 2021-05-18 PDBE VGW "Initial release" 2021-12-08 RCSB ##