data_VGY # _chem_comp.id VGY _chem_comp.name "2-[5-(3-chloro-4-{[(1R)-1-(2-fluorophenyl)ethyl]amino}quinolin-6-yl)pyrimidin-2-yl]propan-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H22 Cl F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-12 _chem_comp.pdbx_modified_date 2020-12-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 436.909 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VGY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JRA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VGY N14 N1 N 0 1 Y N N -18.830 -2.220 -25.422 -5.391 0.531 -0.159 N14 VGY 1 VGY C13 C1 C 0 1 Y N N -18.013 -1.687 -26.344 -4.342 1.335 -0.157 C13 VGY 2 VGY C18 C2 C 0 1 N N N -19.097 -3.786 -23.453 -6.476 -1.646 -0.021 C18 VGY 3 VGY C17 C3 C 0 1 Y N N -16.234 -3.072 -25.678 -2.964 -0.602 0.157 C17 VGY 4 VGY C15 C4 C 0 1 Y N N -18.276 -3.196 -24.612 -5.248 -0.771 -0.012 C15 VGY 5 VGY C19 C5 C 0 1 N N N -19.277 -5.298 -23.535 -7.135 -1.584 -1.401 C19 VGY 6 VGY C20 C6 C 0 1 N N N -18.483 -3.390 -22.115 -6.075 -3.089 0.289 C20 VGY 7 VGY C23 C7 C 0 1 N N R -11.605 -1.948 -25.834 2.855 -0.560 -0.571 C23 VGY 8 VGY C24 C8 C 0 1 Y N N -11.003 -3.039 -26.707 3.537 -1.814 -0.088 C24 VGY 9 VGY C11 C9 C 0 1 Y N N -12.176 -0.292 -27.749 1.823 1.349 0.342 C11 VGY 10 VGY C12 C10 C 0 1 Y N N -16.684 -2.060 -26.527 -3.068 0.783 0.004 C12 VGY 11 VGY C27 C11 C 0 1 Y N N -9.908 -5.096 -28.258 4.782 -4.122 0.793 C27 VGY 12 VGY CL1 CL1 CL 0 0 N N N -9.782 0.813 -28.386 4.515 1.621 0.530 CL1 VGY 13 VGY C2 C12 C 0 1 Y N N -15.785 -1.385 -27.498 -1.860 1.644 0.013 C2 VGY 14 VGY C3 C13 C 0 1 Y N N -16.196 -1.102 -28.806 -1.992 3.032 -0.143 C3 VGY 15 VGY C4 C14 C 0 1 Y N N -15.334 -0.569 -29.727 -0.901 3.842 -0.140 C4 VGY 16 VGY C5 C15 C 0 1 Y N N -14.489 -1.087 -27.142 -0.609 1.073 0.174 C5 VGY 17 VGY C6 C16 C 0 1 Y N N -13.545 -0.595 -28.070 0.525 1.893 0.180 C6 VGY 18 VGY C7 C17 C 0 1 Y N N -13.985 -0.306 -29.388 0.384 3.293 0.021 C7 VGY 19 VGY N8 N2 N 0 1 Y N N -13.173 0.262 -30.336 1.468 4.077 0.025 N8 VGY 20 VGY C9 C18 C 0 1 Y N N -11.937 0.571 -29.994 2.676 3.585 0.173 C9 VGY 21 VGY C10 C19 C 0 1 Y N N -11.405 0.324 -28.739 2.898 2.224 0.339 C10 VGY 22 VGY N16 N3 N 0 1 Y N N -16.978 -3.649 -24.722 -4.065 -1.332 0.143 N16 VGY 23 VGY O21 O1 O 0 1 N N N -20.412 -3.191 -23.500 -7.397 -1.184 0.968 O21 VGY 24 VGY N22 N4 N 0 1 N N N -11.605 -0.616 -26.455 2.012 -0.016 0.501 N22 VGY 25 VGY C25 C20 C 0 1 Y N N -10.057 -2.772 -27.694 2.970 -2.561 0.927 C25 VGY 26 VGY C26 C21 C 0 1 Y N N -9.524 -3.790 -28.471 3.593 -3.715 1.367 C26 VGY 27 VGY C28 C22 C 0 1 Y N N -10.831 -5.396 -27.270 5.354 -3.372 -0.218 C28 VGY 28 VGY C29 C23 C 0 1 Y N N -11.354 -4.364 -26.528 4.729 -2.220 -0.664 C29 VGY 29 VGY C30 C24 C 0 1 N N N -10.909 -1.863 -24.480 1.986 -0.888 -1.787 C30 VGY 30 VGY F31 F1 F 0 1 N N N -12.205 -4.666 -25.512 5.281 -1.493 -1.660 F31 VGY 31 VGY H36 H1 H 0 1 N N N -18.413 -0.917 -26.987 -4.466 2.401 -0.279 H36 VGY 32 VGY H37 H2 H 0 1 N N N -15.217 -3.414 -25.799 -1.998 -1.068 0.285 H37 VGY 33 VGY H38 H3 H 0 1 N N N -19.871 -5.644 -22.676 -8.023 -2.217 -1.407 H38 VGY 34 VGY H39 H4 H 0 1 N N N -19.798 -5.555 -24.469 -7.420 -0.556 -1.621 H39 VGY 35 VGY H40 H5 H 0 1 N N N -18.291 -5.786 -23.519 -6.432 -1.936 -2.155 H40 VGY 36 VGY H42 H6 H 0 1 N N N -19.080 -3.818 -21.296 -5.605 -3.133 1.271 H42 VGY 37 VGY H43 H7 H 0 1 N N N -17.453 -3.772 -22.057 -6.963 -3.722 0.282 H43 VGY 38 VGY H41 H8 H 0 1 N N N -18.473 -2.294 -22.027 -5.372 -3.442 -0.466 H41 VGY 39 VGY H46 H9 H 0 1 N N N -12.651 -2.228 -25.642 3.607 0.178 -0.851 H46 VGY 40 VGY H49 H10 H 0 1 N N N -9.489 -5.887 -28.862 5.270 -5.020 1.140 H49 VGY 41 VGY H32 H11 H 0 1 N N N -17.216 -1.309 -29.095 -2.974 3.463 -0.268 H32 VGY 42 VGY H33 H12 H 0 1 N N N -15.687 -0.347 -30.723 -1.020 4.908 -0.261 H33 VGY 43 VGY H34 H13 H 0 1 N N N -14.183 -1.235 -26.117 -0.510 0.005 0.294 H34 VGY 44 VGY H35 H14 H 0 1 N N N -11.305 1.042 -30.733 3.521 4.258 0.169 H35 VGY 45 VGY H44 H15 H 0 1 N N N -20.943 -3.538 -22.793 -8.212 -1.702 1.018 H44 VGY 46 VGY H45 H16 H 0 1 N N N -10.642 -0.353 -26.517 2.402 -0.224 1.408 H45 VGY 47 VGY H47 H17 H 0 1 N N N -9.733 -1.755 -27.857 2.041 -2.244 1.376 H47 VGY 48 VGY H48 H18 H 0 1 N N N -8.807 -3.558 -29.244 3.149 -4.298 2.160 H48 VGY 49 VGY H50 H19 H 0 1 N N N -11.133 -6.417 -27.087 6.289 -3.685 -0.660 H50 VGY 50 VGY H52 H20 H 0 1 N N N -11.371 -1.066 -23.879 1.234 -1.626 -1.507 H52 VGY 51 VGY H51 H21 H 0 1 N N N -11.011 -2.824 -23.954 1.493 0.018 -2.137 H51 VGY 52 VGY H53 H22 H 0 1 N N N -9.843 -1.639 -24.630 2.612 -1.292 -2.583 H53 VGY 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VGY N8 C9 DOUB Y N 1 VGY N8 C7 SING Y N 2 VGY C9 C10 SING Y N 3 VGY C4 C7 DOUB Y N 4 VGY C4 C3 SING Y N 5 VGY C7 C6 SING Y N 6 VGY C3 C2 DOUB Y N 7 VGY C10 CL1 SING N N 8 VGY C10 C11 DOUB Y N 9 VGY C26 C27 DOUB Y N 10 VGY C26 C25 SING Y N 11 VGY C27 C28 SING Y N 12 VGY C6 C11 SING Y N 13 VGY C6 C5 DOUB Y N 14 VGY C11 N22 SING N N 15 VGY C25 C24 DOUB Y N 16 VGY C2 C5 SING Y N 17 VGY C2 C12 SING N N 18 VGY C28 C29 DOUB Y N 19 VGY C24 C29 SING Y N 20 VGY C24 C23 SING N N 21 VGY C29 F31 SING N N 22 VGY C12 C13 DOUB Y N 23 VGY C12 C17 SING Y N 24 VGY N22 C23 SING N N 25 VGY C13 N14 SING Y N 26 VGY C23 C30 SING N N 27 VGY C17 N16 DOUB Y N 28 VGY N14 C15 DOUB Y N 29 VGY N16 C15 SING Y N 30 VGY C15 C18 SING N N 31 VGY C19 C18 SING N N 32 VGY O21 C18 SING N N 33 VGY C18 C20 SING N N 34 VGY C13 H36 SING N N 35 VGY C17 H37 SING N N 36 VGY C19 H38 SING N N 37 VGY C19 H39 SING N N 38 VGY C19 H40 SING N N 39 VGY C20 H42 SING N N 40 VGY C20 H43 SING N N 41 VGY C20 H41 SING N N 42 VGY C23 H46 SING N N 43 VGY C27 H49 SING N N 44 VGY C3 H32 SING N N 45 VGY C4 H33 SING N N 46 VGY C5 H34 SING N N 47 VGY C9 H35 SING N N 48 VGY O21 H44 SING N N 49 VGY N22 H45 SING N N 50 VGY C25 H47 SING N N 51 VGY C26 H48 SING N N 52 VGY C28 H50 SING N N 53 VGY C30 H52 SING N N 54 VGY C30 H51 SING N N 55 VGY C30 H53 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VGY SMILES ACDLabs 12.01 "n1c(C(C)(C)O)ncc(c1)c3cc4c(NC(C)c2c(cccc2)F)c(Cl)cnc4cc3" VGY InChI InChI 1.03 "InChI=1S/C24H22ClFN4O/c1-14(17-6-4-5-7-20(17)26)30-22-18-10-15(8-9-21(18)27-13-19(22)25)16-11-28-23(29-12-16)24(2,3)31/h4-14,31H,1-3H3,(H,27,30)/t14-/m1/s1" VGY InChIKey InChI 1.03 TZXWJHVVESOPPE-CQSZACIVSA-N VGY SMILES_CANONICAL CACTVS 3.385 "C[C@@H](Nc1c(Cl)cnc2ccc(cc12)c3cnc(nc3)C(C)(C)O)c4ccccc4F" VGY SMILES CACTVS 3.385 "C[CH](Nc1c(Cl)cnc2ccc(cc12)c3cnc(nc3)C(C)(C)O)c4ccccc4F" VGY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1ccccc1F)Nc2c3cc(ccc3ncc2Cl)c4cnc(nc4)C(C)(C)O" VGY SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1F)Nc2c3cc(ccc3ncc2Cl)c4cnc(nc4)C(C)(C)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VGY "SYSTEMATIC NAME" ACDLabs 12.01 "2-[5-(3-chloro-4-{[(1R)-1-(2-fluorophenyl)ethyl]amino}quinolin-6-yl)pyrimidin-2-yl]propan-2-ol" VGY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[5-[3-chloranyl-4-[[(1~{R})-1-(2-fluorophenyl)ethyl]amino]quinolin-6-yl]pyrimidin-2-yl]propan-2-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VGY "Create component" 2020-08-12 RCSB VGY "Initial release" 2020-12-09 RCSB ##