data_VH0 # _chem_comp.id VH0 _chem_comp.name "(2S,4S)-4-[4-(aminomethyl)-1,2,3-triazol-1-yl]pyrrolidine-2-carboxylic acid" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H13 N5 O2" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-04-23 _chem_comp.pdbx_modified_date 2019-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 211.221 _chem_comp.one_letter_code P _chem_comp.three_letter_code VH0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4BCC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VH0 N11 N11 N 0 1 N N N 40.437 37.019 85.073 1.942 0.434 -1.437 N11 VH0 1 VH0 C23 C23 C 0 1 N N N 40.103 36.520 86.420 0.805 1.378 -1.408 C23 VH0 2 VH0 C10 C10 C 0 1 N N S 39.610 36.381 84.044 2.536 0.473 -0.076 C10 VH0 3 VH0 C8 C8 C 0 1 N N N 39.103 37.522 83.177 3.318 -0.786 0.200 C8 VH0 4 VH0 O9 O9 O 0 1 N N N 39.201 38.710 83.514 3.127 -1.774 -0.470 O9 VH0 5 VH0 C25 C25 C 0 1 N N N 38.561 35.624 84.829 1.296 0.560 0.849 C25 VH0 6 VH0 C24 C24 C 0 1 N N S 38.641 36.185 86.234 0.337 1.477 0.056 C24 VH0 7 VH0 N26 N26 N 0 1 Y N N 37.803 37.409 86.197 -1.042 1.001 0.183 N26 VH0 8 VH0 N27 N27 N 0 1 Y N N 38.240 38.582 86.826 -1.924 1.454 1.003 N27 VH0 9 VH0 N28 N28 N 0 1 Y N N 37.199 39.513 86.623 -3.033 0.819 0.858 N28 VH0 10 VH0 C30 C30 C 0 1 Y N N 36.596 37.581 85.666 -1.610 0.013 -0.547 C30 VH0 11 VH0 C29 C29 C 0 1 Y N N 36.224 38.888 85.920 -2.884 -0.099 -0.103 C29 VH0 12 VH0 C31 C31 C 0 1 N N N 34.923 39.467 85.425 -3.929 -1.066 -0.598 C31 VH0 13 VH0 N32 N32 N 0 1 N N N 34.119 40.122 86.447 -3.943 -2.255 0.264 N32 VH0 14 VH0 H231 H231 H 0 0 N N N 40.694 35.630 86.681 1.126 2.358 -1.762 H231 VH0 15 VH0 H232 H232 H 0 0 N N N 40.248 37.294 87.188 -0.006 1.003 -2.032 H232 VH0 16 VH0 H10 H10 H 0 1 N N N 40.207 35.683 83.439 3.170 1.352 0.042 H10 VH0 17 VH0 H24 H24 H 0 1 N N N 38.289 35.461 86.983 0.417 2.505 0.410 H24 VH0 18 VH0 H251 H251 H 0 0 N N N 37.562 35.793 84.402 0.854 -0.425 0.996 H251 VH0 19 VH0 H252 H252 H 0 0 N N N 38.782 34.546 84.830 1.560 1.013 1.805 H252 VH0 20 VH0 H30 H30 H 0 1 N N N 36.016 36.840 85.136 -1.140 -0.571 -1.325 H30 VH0 21 VH0 H311 H311 H 0 0 N N N 35.153 40.207 84.644 -4.908 -0.587 -0.572 H311 VH0 22 VH0 H312 H312 H 0 0 N N N 34.327 38.650 84.992 -3.696 -1.361 -1.620 H312 VH0 23 VH0 H32 H32 H 0 1 N N N 33.279 40.475 86.035 -4.637 -2.919 -0.047 H32 VH0 24 VH0 H2 H2 H 0 1 N Y N 40.285 38.007 85.046 1.633 -0.498 -1.670 H2 VH0 25 VH0 H3 H3 H 0 1 N Y N 33.888 39.463 87.162 -3.030 -2.681 0.309 H3 VH0 26 VH0 OXT OXT O 0 1 N Y N 38.592 37.190 81.984 4.225 -0.809 1.188 OXT VH0 27 VH0 HXT HXT H 0 1 N Y N 38.351 37.978 81.512 4.702 -1.639 1.327 HXT VH0 28 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VH0 N11 C23 SING N N 1 VH0 N11 C10 SING N N 2 VH0 C23 C24 SING N N 3 VH0 C10 C8 SING N N 4 VH0 C10 C25 SING N N 5 VH0 C8 O9 DOUB N N 6 VH0 C25 C24 SING N N 7 VH0 C24 N26 SING N N 8 VH0 N26 N27 SING Y N 9 VH0 N26 C30 SING Y N 10 VH0 N27 N28 DOUB Y N 11 VH0 N28 C29 SING Y N 12 VH0 C30 C29 DOUB Y N 13 VH0 C29 C31 SING N N 14 VH0 C31 N32 SING N N 15 VH0 C23 H231 SING N N 16 VH0 C23 H232 SING N N 17 VH0 C10 H10 SING N N 18 VH0 C24 H24 SING N N 19 VH0 C25 H251 SING N N 20 VH0 C25 H252 SING N N 21 VH0 C30 H30 SING N N 22 VH0 C31 H311 SING N N 23 VH0 C31 H312 SING N N 24 VH0 N32 H32 SING N N 25 VH0 N11 H2 SING N N 26 VH0 N32 H3 SING N N 27 VH0 C8 OXT SING N N 28 VH0 OXT HXT SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VH0 SMILES ACDLabs 12.01 "O=C(O)C2NCC(n1nnc(c1)CN)C2" VH0 InChI InChI 1.03 "InChI=1S/C8H13N5O2/c9-2-5-4-13(12-11-5)6-1-7(8(14)15)10-3-6/h4,6-7,10H,1-3,9H2,(H,14,15)/t6-,7-/m0/s1" VH0 InChIKey InChI 1.03 JFEVBUPMGGCXQM-BQBZGAKWSA-N VH0 SMILES_CANONICAL CACTVS 3.385 "NCc1cn(nn1)[C@@H]2CN[C@@H](C2)C(O)=O" VH0 SMILES CACTVS 3.385 "NCc1cn(nn1)[CH]2CN[CH](C2)C(O)=O" VH0 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1c(nnn1[C@H]2C[C@H](NC2)C(=O)O)CN" VH0 SMILES "OpenEye OEToolkits" 1.9.2 "c1c(nnn1C2CC(NC2)C(=O)O)CN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VH0 "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-4-[4-(aminomethyl)-1H-1,2,3-triazol-1-yl]-L-proline" VH0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S,4S)-4-[4-(aminomethyl)-1,2,3-triazol-1-yl]pyrrolidine-2-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VH0 "Create component" 2013-04-23 EBI VH0 "Initial release" 2013-05-01 RCSB VH0 "Modify descriptor" 2014-09-05 RCSB VH0 "Modify one letter code" 2019-10-07 PDBE ##