data_VHL # _chem_comp.id VHL _chem_comp.name "Tricarbonyl di(imidazole) rhenium(I)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H6 N4 O3 Re" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "di(imidazol-1-yl)-tris(oxidaniumylidynemethyl)rhenium(1+)" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2023-09-12 _chem_comp.pdbx_modified_date 2024-04-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 404.376 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VHL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8QCU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VHL C1 C1 C -1 1 N N N N N N 1.364 23.098 36.484 ? ? ? C1 VHL 1 VHL C2 C2 C -1 1 N N N N N N -1.228 23.592 36.534 ? ? ? C2 VHL 2 VHL C3 C3 C -1 1 N N N N N N -0.164 22.289 34.449 ? ? ? C3 VHL 3 VHL C6 C4 C 0 1 Y N N N N N 3.057 23.865 33.783 ? ? ? C6 VHL 4 VHL C5 C5 C 0 1 Y N N N N N 3.736 24.513 32.853 ? ? ? C5 VHL 5 VHL C4 C6 C 0 1 Y N N N N N 1.810 25.471 33.090 ? ? ? C4 VHL 6 VHL C7 C7 C 0 1 Y N N N N N 0.163 27.077 35.591 ? ? ? C7 VHL 7 VHL C9 C8 C 0 1 Y N N N N N 1.295 26.241 37.197 ? ? ? C9 VHL 8 VHL C8 C9 C 0 1 Y N N N N N 1.299 27.579 37.347 ? ? ? C8 VHL 9 VHL N1 N1 N 0 1 Y N N N N N 1.814 24.466 33.944 ? ? ? N1 VHL 10 VHL N2 N2 N 0 1 Y N N N N N 2.944 25.532 32.407 ? ? ? N2 VHL 11 VHL N3 N3 N 0 1 Y N N N N N 0.563 25.928 36.070 ? ? ? N3 VHL 12 VHL N4 N4 N 0 1 Y N N N N N 0.599 28.082 36.349 ? ? ? N4 VHL 13 VHL O1 O1 O 1 1 N N N N N N 2.098 22.575 37.225 ? ? ? O1 VHL 14 VHL O2 O2 O 1 1 N N N N N N -2.060 23.381 37.281 ? ? ? O2 VHL 15 VHL O3 O3 O 1 1 N N N N N N -0.383 21.295 33.960 ? ? ? O3 VHL 16 VHL RE RE RE 1 0 N N N N N N 0.182 23.952 35.291 ? ? ? RE VHL 17 VHL H61 H1 H 0 1 N N N N N N 3.412 23.005 34.331 ? ? ? H61 VHL 18 VHL H51 H2 H 0 1 N N N N N N 4.733 24.280 32.509 ? ? ? H51 VHL 19 VHL H41 H3 H 0 1 N N N N N N 0.986 26.158 32.963 ? ? ? H41 VHL 20 VHL H71 H4 H 0 1 N N N N N N -0.439 27.195 34.702 ? ? ? H71 VHL 21 VHL H91 H5 H 0 1 N N N N N N 1.783 25.532 37.849 ? ? ? H91 VHL 22 VHL H81 H6 H 0 1 N N N N N N 1.784 28.135 38.136 ? ? ? H81 VHL 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VHL RE N1 SING N N 1 VHL RE N3 SING N N 2 VHL C1 O1 TRIP N N 3 VHL C2 O2 TRIP N N 4 VHL C3 O3 TRIP N N 5 VHL N1 C4 SING Y N 6 VHL N1 C6 SING Y N 7 VHL C4 N2 DOUB Y N 8 VHL N2 C5 SING Y N 9 VHL C5 C6 DOUB Y N 10 VHL N3 C7 SING Y N 11 VHL N3 C9 SING Y N 12 VHL C7 N4 DOUB Y N 13 VHL N4 C8 SING Y N 14 VHL C8 C9 DOUB Y N 15 VHL C6 H61 SING N N 16 VHL C5 H51 SING N N 17 VHL C4 H41 SING N N 18 VHL C7 H71 SING N N 19 VHL C9 H91 SING N N 20 VHL C8 H81 SING N N 21 VHL RE C1 SING N N 22 VHL RE C2 SING N N 23 VHL RE C3 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VHL InChI InChI 1.06 InChI=1S/2C3H3N2.3CO.Re/c2*1-2-5-3-4-1;3*1-2;/h2*1-3H;;;;/q2*-1;;;;+3 VHL InChIKey InChI 1.06 MWUHNOZKPZGOSW-UHFFFAOYSA-N VHL SMILES_CANONICAL CACTVS 3.385 "[C-]#[O+].[C-]#[O+].[C-]#[O+].[Re+](n1ccnc1)n2ccnc2" VHL SMILES CACTVS 3.385 "[C-]#[O+].[C-]#[O+].[C-]#[O+].[Re+](n1ccnc1)n2ccnc2" VHL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cn(cn1)[Re+]([C-]#[O+])([C-]#[O+])([C-]#[O+])n2ccnc2" VHL SMILES "OpenEye OEToolkits" 2.0.7 "c1cn(cn1)[Re+]([C-]#[O+])([C-]#[O+])([C-]#[O+])n2ccnc2" # _pdbx_chem_comp_identifier.comp_id VHL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "di(imidazol-1-yl)-tris(oxidaniumylidynemethyl)rhenium(1+)" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id VHL _pdbx_chem_comp_synonyms.name "di(imidazol-1-yl)-tris(oxidaniumylidynemethyl)rhenium(1+)" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VHL "Create component" 2023-09-12 PDBE VHL "Modify charge" 2023-11-15 PDBE VHL "Modify name" 2023-11-15 PDBE VHL "Initial release" 2024-05-01 RCSB #