data_VHV # _chem_comp.id VHV _chem_comp.name "N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H40 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-13 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 504.619 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VHV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JQ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VHV C1 C1 C 0 1 Y N N N N N -16.424 10.746 -2.513 9.557 -1.096 1.945 C1 VHV 1 VHV C11 C2 C 0 1 N N S N N N -15.078 4.782 -0.452 1.747 0.611 -1.206 C11 VHV 2 VHV C12 C3 C 0 1 N N N N N N -15.235 3.508 0.317 0.547 0.697 -0.299 C12 VHV 3 VHV C14 C4 C 0 1 N N S N N N -15.665 1.153 0.329 -1.835 1.067 0.062 C14 VHV 4 VHV C15 C5 C 0 1 N N N N N N -14.297 0.600 0.579 -3.062 0.881 -0.792 C15 VHV 5 VHV C17 C6 C 0 1 N N S N N N -12.664 -0.217 2.153 -5.351 0.103 -1.098 C17 VHV 6 VHV C19 C7 C 0 1 N N N N N N -12.004 0.536 3.296 -6.223 -0.958 -0.425 C19 VHV 7 VHV C2 C8 C 0 1 Y N N N N N -17.287 9.926 -3.244 9.106 -1.856 0.882 C2 VHV 8 VHV C20 C9 C 0 1 N N S N N N -11.750 1.969 2.857 -5.446 -2.273 -0.330 C20 VHV 9 VHV C21 C10 C 0 1 N N N N N N -10.548 2.099 1.934 -6.318 -3.372 0.319 C21 VHV 10 VHV C22 C11 C 0 1 N N N N N N -9.903 3.412 2.377 -5.908 -3.262 1.805 C22 VHV 11 VHV C24 C12 C 0 1 N N N N N N -11.405 2.822 4.023 -4.271 -2.126 0.612 C24 VHV 12 VHV C3 C13 C 0 1 Y N N N N N -18.060 8.967 -2.585 8.127 -1.358 0.042 C3 VHV 13 VHV C30 C14 C 0 1 N N N N N N -13.679 5.336 -0.316 1.465 -0.388 -2.331 C30 VHV 14 VHV C31 C15 C 0 1 N N N N N N -13.634 6.693 -1.015 2.684 -0.475 -3.252 C31 VHV 15 VHV C32 C16 C 0 1 N N N N N N -12.644 4.350 -0.843 1.181 -1.766 -1.729 C32 VHV 16 VHV C34 C17 C 0 1 N N N N N N -16.466 0.164 -0.509 -1.939 2.389 0.825 C34 VHV 17 VHV C35 C18 C 0 1 N N N N N N -17.904 0.625 -0.725 -3.150 2.343 1.760 C35 VHV 18 VHV C36 C19 C 0 1 N N N N N N -18.673 0.718 0.591 -2.918 1.290 2.845 C36 VHV 19 VHV C37 C20 C 0 1 N N N N N N -18.626 -0.270 -1.742 -3.342 3.714 2.413 C37 VHV 20 VHV C4 C21 C 0 1 Y N N N N N -17.976 8.824 -1.197 7.598 -0.101 0.267 C4 VHV 21 VHV C5 C22 C 0 1 Y N N N N N -17.108 9.639 -0.486 8.048 0.659 1.331 C5 VHV 22 VHV C6 C23 C 0 1 Y N N N N N -16.330 10.591 -1.134 9.028 0.161 2.169 C6 VHV 23 VHV C7 C24 C 0 1 N N N N N N -18.794 7.804 -0.431 6.531 0.443 -0.649 C7 VHV 24 VHV C8 C25 C 0 1 N N N N N N -12.824 -1.701 2.455 -6.170 1.379 -1.306 C8 VHV 25 VHV C9 C26 C 0 1 N N N N N N -17.125 6.023 -0.392 4.154 0.478 -0.851 C9 VHV 26 VHV N10 N1 N 0 1 N N N N N N -15.940 5.771 0.127 2.910 0.165 -0.436 N10 VHV 27 VHV N13 N2 N 0 1 N N N N N N -15.567 2.419 -0.369 -0.645 1.089 -0.792 N13 VHV 28 VHV N16 N3 N 0 1 N N N N N N -13.979 0.320 1.842 -4.196 0.397 -0.247 N16 VHV 29 VHV N23 N4 N 0 1 N N N N N N -10.416 3.656 3.715 -4.555 -2.693 1.797 N23 VHV 30 VHV O26 O1 O 0 1 N N N N N N -11.985 2.728 5.091 -3.225 -1.576 0.338 O26 VHV 31 VHV O29 O2 O 0 1 N N N N N N -17.516 5.539 -1.441 4.310 1.132 -1.863 O29 VHV 32 VHV O33 O3 O 0 1 N N N N N N -15.083 3.496 1.532 0.653 0.414 0.876 O33 VHV 33 VHV O38 O4 O 0 1 N N N N N N -13.533 0.428 -0.359 -3.031 1.167 -1.970 O38 VHV 34 VHV O8 O5 O 0 1 N N N N N N -17.994 6.920 0.338 5.223 0.068 -0.143 O8 VHV 35 VHV O9 O6 O 0 1 N N N N N N -11.647 -2.175 3.113 -6.719 1.801 -0.056 O9 VHV 36 VHV H1 H1 H 0 1 N N N N N N -15.833 11.497 -3.016 10.319 -1.487 2.603 H1 VHV 37 VHV H2 H2 H 0 1 N N N N N N -15.317 4.618 -1.513 1.949 1.593 -1.635 H2 VHV 38 VHV H3 H3 H 0 1 N N N N N N -16.177 1.297 1.292 -1.757 0.243 0.771 H3 VHV 39 VHV H4 H4 H 0 1 N N N N N N -12.021 -0.119 1.266 -5.006 -0.268 -2.063 H4 VHV 40 VHV H5 H5 H 0 1 N N N N N N -12.667 0.530 4.174 -6.495 -0.624 0.576 H5 VHV 41 VHV H6 H6 H 0 1 N N N N N N -11.050 0.054 3.554 -7.127 -1.113 -1.014 H6 VHV 42 VHV H7 H7 H 0 1 N N N N N N -17.356 10.033 -4.316 9.519 -2.838 0.706 H7 VHV 43 VHV H8 H8 H 0 1 N N N N N N -12.645 2.364 2.353 -5.106 -2.586 -1.318 H8 VHV 44 VHV H9 H9 H 0 1 N N N N N N -10.863 2.151 0.881 -7.378 -3.156 0.190 H9 VHV 45 VHV H10 H10 H 0 1 N N N N N N -9.855 1.255 2.068 -6.070 -4.354 -0.082 H10 VHV 46 VHV H11 H11 H 0 1 N N N N N N -8.807 3.317 2.395 -6.592 -2.602 2.337 H11 VHV 47 VHV H12 H12 H 0 1 N N N N N N -10.189 4.230 1.699 -5.899 -4.249 2.267 H12 VHV 48 VHV H13 H13 H 0 1 N N N N N N -18.726 8.333 -3.151 7.775 -1.951 -0.789 H13 VHV 49 VHV H14 H14 H 0 1 N N N N N N -13.478 5.499 0.753 0.600 -0.056 -2.904 H14 VHV 50 VHV H15 H15 H 0 1 N N N N N N -14.404 7.352 -0.587 2.483 -1.187 -4.053 H15 VHV 51 VHV H16 H16 H 0 1 N N N N N N -12.642 7.147 -0.872 2.887 0.506 -3.680 H16 VHV 52 VHV H17 H17 H 0 1 N N N N N N -13.823 6.558 -2.090 3.549 -0.807 -2.679 H17 VHV 53 VHV H18 H18 H 0 1 N N N N N N -12.732 3.399 -0.298 0.313 -1.703 -1.073 H18 VHV 54 VHV H19 H19 H 0 1 N N N N N N -12.817 4.176 -1.915 0.980 -2.477 -2.530 H19 VHV 55 VHV H20 H20 H 0 1 N N N N N N -11.635 4.764 -0.697 2.046 -2.098 -1.156 H20 VHV 56 VHV H21 H21 H 0 1 N N N N N N -16.479 -0.808 0.006 -1.033 2.543 1.411 H21 VHV 57 VHV H22 H22 H 0 1 N N N N N N -15.978 0.053 -1.489 -2.058 3.209 0.117 H22 VHV 58 VHV H23 H23 H 0 1 N N N N N N -17.863 1.638 -1.153 -4.041 2.085 1.188 H23 VHV 59 VHV H24 H24 H 0 1 N N N N N N -18.125 1.366 1.291 -3.791 1.238 3.494 H24 VHV 60 VHV H25 H25 H 0 1 N N N N N N -19.671 1.142 0.403 -2.754 0.318 2.378 H25 VHV 61 VHV H26 H26 H 0 1 N N N N N N -18.777 -0.287 1.026 -2.042 1.562 3.434 H26 VHV 62 VHV H27 H27 H 0 1 N N N N N N -19.658 0.086 -1.877 -3.508 4.464 1.640 H27 VHV 63 VHV H28 H28 H 0 1 N N N N N N -18.096 -0.231 -2.705 -4.205 3.681 3.078 H28 VHV 64 VHV H29 H29 H 0 1 N N N N N N -18.641 -1.306 -1.373 -2.451 3.972 2.985 H29 VHV 65 VHV H30 H30 H 0 1 N N N N N N -17.036 9.532 0.586 7.635 1.641 1.506 H30 VHV 66 VHV H31 H31 H 0 1 N N N N N N -15.652 11.211 -0.566 9.377 0.753 3.002 H31 VHV 67 VHV H32 H32 H 0 1 N N N N N N -19.477 8.338 0.246 6.607 1.529 -0.691 H32 VHV 68 VHV H33 H33 H 0 1 N N N N N N -19.379 7.212 -1.150 6.666 0.030 -1.649 H33 VHV 69 VHV H34 H34 H 0 1 N N N N N N -13.697 -1.852 3.107 -5.525 2.164 -1.703 H34 VHV 70 VHV H35 H35 H 0 1 N N N N N N -12.969 -2.254 1.515 -6.978 1.182 -2.009 H35 VHV 71 VHV H36 H36 H 0 1 N N N N N N -15.638 6.276 0.935 2.786 -0.357 0.372 H36 VHV 72 VHV H37 H37 H 0 1 N N N N N N -15.746 2.473 -1.351 -0.714 1.387 -1.713 H37 VHV 73 VHV H38 H38 H 0 1 N N N N N N -14.642 0.479 2.573 -4.247 0.244 0.710 H38 VHV 74 VHV H39 H39 H 0 1 N N N N N N -10.068 4.364 4.329 -3.944 -2.723 2.550 H39 VHV 75 VHV H40 H40 H 0 1 N N N N N N -11.741 -3.101 3.304 -7.251 2.607 -0.112 H40 VHV 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VHV C2 C3 DOUB Y N 1 VHV C2 C1 SING Y N 2 VHV C3 C4 SING Y N 3 VHV C1 C6 DOUB Y N 4 VHV C37 C35 SING N N 5 VHV O29 C9 DOUB N N 6 VHV C4 C5 DOUB Y N 7 VHV C4 C7 SING N N 8 VHV C6 C5 SING Y N 9 VHV C31 C30 SING N N 10 VHV C32 C30 SING N N 11 VHV C35 C34 SING N N 12 VHV C35 C36 SING N N 13 VHV C34 C14 SING N N 14 VHV C11 C30 SING N N 15 VHV C11 N10 SING N N 16 VHV C11 C12 SING N N 17 VHV C7 O8 SING N N 18 VHV C9 N10 SING N N 19 VHV C9 O8 SING N N 20 VHV N13 C12 SING N N 21 VHV N13 C14 SING N N 22 VHV O38 C15 DOUB N N 23 VHV C12 O33 DOUB N N 24 VHV C14 C15 SING N N 25 VHV C15 N16 SING N N 26 VHV N16 C17 SING N N 27 VHV C21 C22 SING N N 28 VHV C21 C20 SING N N 29 VHV C17 C8 SING N N 30 VHV C17 C19 SING N N 31 VHV C22 N23 SING N N 32 VHV C8 O9 SING N N 33 VHV C20 C19 SING N N 34 VHV C20 C24 SING N N 35 VHV N23 C24 SING N N 36 VHV C24 O26 DOUB N N 37 VHV C1 H1 SING N N 38 VHV C11 H2 SING N N 39 VHV C14 H3 SING N N 40 VHV C17 H4 SING N N 41 VHV C19 H5 SING N N 42 VHV C19 H6 SING N N 43 VHV C2 H7 SING N N 44 VHV C20 H8 SING N N 45 VHV C21 H9 SING N N 46 VHV C21 H10 SING N N 47 VHV C22 H11 SING N N 48 VHV C22 H12 SING N N 49 VHV C3 H13 SING N N 50 VHV C30 H14 SING N N 51 VHV C31 H15 SING N N 52 VHV C31 H16 SING N N 53 VHV C31 H17 SING N N 54 VHV C32 H18 SING N N 55 VHV C32 H19 SING N N 56 VHV C32 H20 SING N N 57 VHV C34 H21 SING N N 58 VHV C34 H22 SING N N 59 VHV C35 H23 SING N N 60 VHV C36 H24 SING N N 61 VHV C36 H25 SING N N 62 VHV C36 H26 SING N N 63 VHV C37 H27 SING N N 64 VHV C37 H28 SING N N 65 VHV C37 H29 SING N N 66 VHV C5 H30 SING N N 67 VHV C6 H31 SING N N 68 VHV C7 H32 SING N N 69 VHV C7 H33 SING N N 70 VHV C8 H34 SING N N 71 VHV C8 H35 SING N N 72 VHV N10 H36 SING N N 73 VHV N13 H37 SING N N 74 VHV N16 H38 SING N N 75 VHV N23 H39 SING N N 76 VHV O9 H40 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VHV SMILES ACDLabs 12.01 "c1ccc(cc1)COC(NC(C(C)C)C(=O)NC(C(NC(CO)CC2C(=O)NCC2)=O)CC(C)C)=O" VHV InChI InChI 1.03 "InChI=1S/C26H40N4O6/c1-16(2)12-21(24(33)28-20(14-31)13-19-10-11-27-23(19)32)29-25(34)22(17(3)4)30-26(35)36-15-18-8-6-5-7-9-18/h5-9,16-17,19-22,31H,10-15H2,1-4H3,(H,27,32)(H,28,33)(H,29,34)(H,30,35)/t19-,20-,21-,22-/m0/s1" VHV InChIKey InChI 1.03 GLZAWCKOCLSXEU-CMOCDZPBSA-N VHV SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)[C@@H](NC(=O)OCc1ccccc1)C(C)C)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O" VHV SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)[CH](NC(=O)OCc1ccccc1)C(C)C)C(=O)N[CH](CO)C[CH]2CCNC2=O" VHV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)CO)NC(=O)[C@H](C(C)C)NC(=O)OCc2ccccc2" VHV SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)CO)NC(=O)C(C(C)C)NC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VHV "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide" VHV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VHV "Create component" 2020-08-13 RCSB VHV "Initial release" 2020-12-23 RCSB VHV "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id VHV _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C8 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #