data_VI0 # _chem_comp.id VI0 _chem_comp.name "(10S)-10-phenyl-10,11-dihydro-5H-pyrimido[4,5-c][2]benzazepin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H16 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-09 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 288.346 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VI0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FY6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VI0 C01 C1 C 0 1 N N S 4.489 6.758 18.946 -0.865 0.516 1.325 C01 VI0 1 VI0 C02 C2 C 0 1 Y N N 4.424 6.728 20.453 -1.882 -0.261 0.529 C02 VI0 2 VI0 C05 C3 C 0 1 Y N N 3.735 5.642 20.951 -1.749 -1.535 0.054 C05 VI0 3 VI0 C06 C4 C 0 1 Y N N 5.064 7.618 21.320 -3.063 0.444 0.271 C06 VI0 4 VI0 C07 C5 C 0 1 Y N N 5.759 8.679 17.847 -0.538 2.943 0.807 C07 VI0 5 VI0 C10 C6 C 0 1 N N N 3.034 4.705 20.020 -0.607 -2.472 0.305 C10 VI0 6 VI0 C11 C7 C 0 1 Y N N 3.683 5.454 22.303 -2.774 -2.076 -0.734 C11 VI0 7 VI0 C13 C8 C 0 1 Y N N 6.967 9.119 17.285 -0.041 3.958 0.012 C13 VI0 8 VI0 C15 C9 C 0 1 Y N N 1.926 5.389 19.236 0.750 -1.875 0.102 C15 VI0 9 VI0 C17 C10 C 0 1 Y N N 4.298 6.328 23.209 -3.925 -1.374 -0.998 C17 VI0 10 VI0 C18 C11 C 0 1 Y N N 8.059 8.242 17.206 0.666 3.654 -1.136 C18 VI0 11 VI0 C19 C12 C 0 1 Y N N 0.645 4.948 19.291 1.617 -2.339 -0.862 C19 VI0 12 VI0 C20 C13 C 0 1 Y N N -0.068 6.575 17.823 3.207 -0.865 -0.078 C20 VI0 13 VI0 C03 C14 C 0 1 Y N N 5.686 7.353 18.340 -0.324 1.623 0.458 C03 VI0 14 VI0 N04 N1 N 0 1 N N N 3.345 7.105 18.218 0.244 -0.273 1.808 N04 VI0 15 VI0 C08 C15 C 0 1 Y N N 6.780 6.509 18.253 0.389 1.318 -0.687 C08 VI0 16 VI0 C09 C16 C 0 1 Y N N 2.139 6.501 18.397 1.137 -0.836 0.929 C09 VI0 17 VI0 C12 C17 C 0 1 Y N N 4.984 7.402 22.689 -4.077 -0.101 -0.479 C12 VI0 18 VI0 C14 C18 C 0 1 Y N N 7.959 6.960 17.702 0.876 2.334 -1.489 C14 VI0 19 VI0 N16 N2 N 0 1 Y N N 1.167 7.136 17.713 2.384 -0.376 0.838 N16 VI0 20 VI0 N21 N3 N 0 1 Y N N -0.371 5.534 18.601 2.833 -1.810 -0.928 N21 VI0 21 VI0 N22 N4 N 0 1 N N N -1.059 7.098 17.076 4.498 -0.371 -0.151 N22 VI0 22 VI0 H1 H1 H 0 1 N N N 4.614 5.692 18.706 -1.367 0.964 2.182 H1 VI0 23 VI0 H23 H2 H 0 1 N N N 5.613 8.462 20.930 -3.180 1.441 0.671 H23 VI0 24 VI0 H24 H3 H 0 1 N N N 4.904 9.337 17.902 -1.091 3.181 1.704 H24 VI0 25 VI0 H27 H4 H 0 1 N N N 3.769 4.297 19.310 -0.676 -2.830 1.332 H27 VI0 26 VI0 H26 H5 H 0 1 N N N 2.596 3.885 20.608 -0.710 -3.328 -0.362 H26 VI0 27 VI0 H28 H6 H 0 1 N N N 3.147 4.599 22.688 -2.656 -3.068 -1.143 H28 VI0 28 VI0 H30 H7 H 0 1 N N N 7.056 10.130 16.914 -0.206 4.990 0.287 H30 VI0 29 VI0 H32 H8 H 0 1 N N N 4.236 6.165 24.275 -4.703 -1.812 -1.606 H32 VI0 30 VI0 H33 H9 H 0 1 N N N 8.983 8.573 16.754 1.054 4.447 -1.758 H33 VI0 31 VI0 H34 H10 H 0 1 N N N 0.421 4.092 19.911 1.314 -3.115 -1.549 H34 VI0 32 VI0 H2 H11 H 0 1 N N N 3.194 8.078 18.391 0.360 -0.407 2.761 H2 VI0 33 VI0 H25 H12 H 0 1 N N N 6.709 5.495 18.618 0.557 0.287 -0.960 H25 VI0 34 VI0 H29 H13 H 0 1 N N N 5.471 8.093 23.361 -4.983 0.458 -0.661 H29 VI0 35 VI0 H31 H14 H 0 1 N N N 8.814 6.302 17.658 1.433 2.096 -2.383 H31 VI0 36 VI0 H35 H15 H 0 1 N N N -0.702 7.857 16.532 5.113 -0.718 -0.816 H35 VI0 37 VI0 H36 H16 H 0 1 N N N -1.424 6.394 16.467 4.788 0.321 0.463 H36 VI0 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VI0 C01 C02 SING N N 1 VI0 C01 C03 SING N N 2 VI0 C01 N04 SING N N 3 VI0 C02 C05 DOUB Y N 4 VI0 C02 C06 SING Y N 5 VI0 C03 C07 DOUB Y N 6 VI0 C03 C08 SING Y N 7 VI0 N04 C09 SING N N 8 VI0 C05 C10 SING N N 9 VI0 C05 C11 SING Y N 10 VI0 C06 C12 DOUB Y N 11 VI0 C07 C13 SING Y N 12 VI0 C08 C14 DOUB Y N 13 VI0 C09 C15 DOUB Y N 14 VI0 C09 N16 SING Y N 15 VI0 C10 C15 SING N N 16 VI0 C11 C17 DOUB Y N 17 VI0 C12 C17 SING Y N 18 VI0 C13 C18 DOUB Y N 19 VI0 C14 C18 SING Y N 20 VI0 C15 C19 SING Y N 21 VI0 N16 C20 DOUB Y N 22 VI0 C19 N21 DOUB Y N 23 VI0 C20 N21 SING Y N 24 VI0 C20 N22 SING N N 25 VI0 C01 H1 SING N N 26 VI0 C06 H23 SING N N 27 VI0 C07 H24 SING N N 28 VI0 C10 H27 SING N N 29 VI0 C10 H26 SING N N 30 VI0 C11 H28 SING N N 31 VI0 C13 H30 SING N N 32 VI0 C17 H32 SING N N 33 VI0 C18 H33 SING N N 34 VI0 C19 H34 SING N N 35 VI0 N04 H2 SING N N 36 VI0 C08 H25 SING N N 37 VI0 C12 H29 SING N N 38 VI0 C14 H31 SING N N 39 VI0 N22 H35 SING N N 40 VI0 N22 H36 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VI0 SMILES ACDLabs 12.01 "Nc1nc2NC(c3ccccc3Cc2cn1)c1ccccc1" VI0 InChI InChI 1.06 "InChI=1S/C18H16N4/c19-18-20-11-14-10-13-8-4-5-9-15(13)16(21-17(14)22-18)12-6-2-1-3-7-12/h1-9,11,16H,10H2,(H3,19,20,21,22)/t16-/m0/s1" VI0 InChIKey InChI 1.06 CBDFYHHMMDZBDU-INIZCTEOSA-N VI0 SMILES_CANONICAL CACTVS 3.385 "Nc1ncc2Cc3ccccc3[C@@H](Nc2n1)c4ccccc4" VI0 SMILES CACTVS 3.385 "Nc1ncc2Cc3ccccc3[CH](Nc2n1)c4ccccc4" VI0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H]2c3ccccc3Cc4cnc(nc4N2)N" VI0 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2c3ccccc3Cc4cnc(nc4N2)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VI0 "SYSTEMATIC NAME" ACDLabs 12.01 "(10S)-10-phenyl-10,11-dihydro-5H-pyrimido[4,5-c][2]benzazepin-2-amine" VI0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6~{S})-6-phenyl-6,11-dihydro-5~{H}-pyrimido[4,5-c][2]benzazepin-3-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VI0 "Create component" 2023-05-09 RCSB VI0 "Initial release" 2023-06-14 RCSB #