data_VI9 # _chem_comp.id VI9 _chem_comp.name "2-({(3P)-4-cyclopropyl-5-methyl-3-[3-(trifluoromethyl)-1,2,4-oxadiazol-5-yl]thiophen-2-yl}carbamoyl)cyclopent-1-ene-1-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H16 F3 N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-09 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 427.398 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VI9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FY8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VI9 C01 C1 C 0 1 Y N N -0.153 13.977 -36.918 2.385 3.010 0.196 C01 VI9 1 VI9 C02 C2 C 0 1 Y N N 0.682 14.853 -37.770 2.710 1.726 0.249 C02 VI9 2 VI9 C04 C3 C 0 1 N N N 0.376 12.923 -35.925 3.360 4.146 0.369 C04 VI9 3 VI9 C06 C4 C 0 1 Y N N -1.683 15.331 -38.347 0.410 1.474 -0.152 C06 VI9 4 VI9 C07 C5 C 0 1 Y N N -0.310 15.719 -38.652 1.601 0.824 0.054 C07 VI9 5 VI9 C11 C6 C 0 1 Y N N -0.159 17.827 -41.637 1.350 -2.726 -0.002 C11 VI9 6 VI9 C15 C7 C 0 1 N N N 3.031 15.523 -36.875 5.237 1.904 -0.320 C15 VI9 7 VI9 C16 C8 C 0 1 N N N -0.578 18.153 -43.025 0.666 -4.064 -0.119 C16 VI9 8 VI9 C17 C9 C 0 1 N N N -4.149 15.759 -38.488 -1.919 1.596 -0.557 C17 VI9 9 VI9 C19 C10 C 0 1 N N N -5.265 16.601 -39.053 -3.218 0.936 -0.785 C19 VI9 10 VI9 C20 C11 C 0 1 N N N -5.098 17.523 -40.164 -3.865 0.751 -2.138 C20 VI9 11 VI9 C21 C12 C 0 1 N N N -6.490 18.255 -40.239 -5.343 0.421 -1.831 C21 VI9 12 VI9 C22 C13 C 0 1 N N N -7.433 17.506 -39.204 -5.247 -0.181 -0.411 C22 VI9 13 VI9 C23 C14 C 0 1 N N N -6.541 16.609 -38.495 -3.988 0.410 0.179 C23 VI9 14 VI9 C24 C15 C 0 1 N N N -6.950 15.738 -37.312 -3.654 0.412 1.615 C24 VI9 15 VI9 C03 C16 C 0 1 N N N 2.194 14.813 -37.894 4.118 1.249 0.493 C03 VI9 16 VI9 S05 S1 S 0 1 Y N N -1.685 14.259 -37.221 0.668 3.211 -0.110 S05 VI9 17 VI9 N08 N1 N 0 1 N N N -2.796 16.018 -38.922 -0.810 0.854 -0.366 N08 VI9 18 VI9 C09 C17 C 0 1 Y N N -0.021 16.775 -39.744 1.733 -0.639 0.072 C09 VI9 19 VI9 N10 N2 N 0 1 Y N N -0.612 16.747 -40.952 0.762 -1.525 -0.100 N10 VI9 20 VI9 N12 N3 N 0 1 Y N N 0.690 18.537 -40.855 2.617 -2.529 0.219 N12 VI9 21 VI9 O13 O1 O 0 1 Y N N 0.743 17.891 -39.646 2.862 -1.342 0.261 O13 VI9 22 VI9 C14 C18 C 0 1 N N N 3.003 16.019 -38.301 4.805 0.470 -0.632 C14 VI9 23 VI9 O18 O2 O 0 1 N N N -4.366 14.869 -37.671 -1.848 2.809 -0.541 O18 VI9 24 VI9 O25 O3 O 0 1 N N N -7.496 14.617 -37.537 -2.575 0.827 1.987 O25 VI9 25 VI9 O26 O4 O 0 1 N N N -6.688 16.072 -36.094 -4.546 -0.047 2.515 O26 VI9 26 VI9 F27 F1 F 0 1 N N N -0.230 19.411 -43.302 1.510 -5.064 0.375 F27 VI9 27 VI9 F28 F2 F 0 1 N N N 0.041 17.322 -43.858 -0.521 -4.047 0.621 F28 VI9 28 VI9 F29 F3 F 0 1 N N N -1.904 17.987 -43.105 0.374 -4.322 -1.463 F29 VI9 29 VI9 H33 H1 H 0 1 N N N -0.472 12.398 -35.460 3.839 4.362 -0.586 H33 VI9 30 VI9 H32 H2 H 0 1 N N N 1.006 12.198 -36.461 2.828 5.031 0.718 H32 VI9 31 VI9 H31 H3 H 0 1 N N N 0.971 13.420 -35.145 4.118 3.866 1.100 H31 VI9 32 VI9 H38 H4 H 0 1 N N N 2.548 16.110 -36.080 4.954 2.681 -1.031 H38 VI9 33 VI9 H37 H5 H 0 1 N N N 3.938 15.043 -36.478 6.200 2.045 0.170 H37 VI9 34 VI9 H40 H6 H 0 1 N N N -4.287 18.238 -39.964 -3.794 1.669 -2.720 H40 VI9 35 VI9 H39 H7 H 0 1 N N N -4.887 16.981 -41.098 -3.396 -0.075 -2.673 H39 VI9 36 VI9 H42 H8 H 0 1 N N N -6.381 19.314 -39.960 -5.952 1.326 -1.830 H42 VI9 37 VI9 H41 H9 H 0 1 N N N -6.905 18.184 -41.255 -5.735 -0.310 -2.539 H41 VI9 38 VI9 H44 H10 H 0 1 N N N -7.898 18.222 -38.511 -6.117 0.104 0.181 H44 VI9 39 VI9 H43 H11 H 0 1 N N N -8.218 16.942 -39.729 -5.163 -1.266 -0.465 H43 VI9 40 VI9 H30 H12 H 0 1 N N N 2.599 13.850 -38.237 4.345 0.958 1.518 H30 VI9 41 VI9 H34 H13 H 0 1 N N N -2.635 16.694 -39.641 -0.867 -0.115 -0.379 H34 VI9 42 VI9 H35 H14 H 0 1 N N N 3.887 15.898 -38.944 4.238 0.302 -1.547 H35 VI9 43 VI9 H36 H15 H 0 1 N N N 2.498 16.965 -38.546 5.484 -0.333 -0.345 H36 VI9 44 VI9 H1 H16 H 0 1 N N N -6.964 15.377 -35.508 -4.282 -0.026 3.445 H1 VI9 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VI9 C01 C02 DOUB Y N 1 VI9 C02 C03 SING N N 2 VI9 C01 C04 SING N N 3 VI9 C01 S05 SING Y N 4 VI9 S05 C06 SING Y N 5 VI9 C02 C07 SING Y N 6 VI9 C06 C07 DOUB Y N 7 VI9 C06 N08 SING N N 8 VI9 C07 C09 SING N N 9 VI9 C09 N10 DOUB Y N 10 VI9 N10 C11 SING Y N 11 VI9 C11 N12 DOUB Y N 12 VI9 C09 O13 SING Y N 13 VI9 N12 O13 SING Y N 14 VI9 C03 C14 SING N N 15 VI9 C03 C15 SING N N 16 VI9 C14 C15 SING N N 17 VI9 C11 C16 SING N N 18 VI9 N08 C17 SING N N 19 VI9 C17 O18 DOUB N N 20 VI9 C17 C19 SING N N 21 VI9 C19 C20 SING N N 22 VI9 C20 C21 SING N N 23 VI9 C21 C22 SING N N 24 VI9 C19 C23 DOUB N N 25 VI9 C22 C23 SING N N 26 VI9 C23 C24 SING N N 27 VI9 C24 O25 DOUB N N 28 VI9 C24 O26 SING N N 29 VI9 C16 F27 SING N N 30 VI9 C16 F28 SING N N 31 VI9 C16 F29 SING N N 32 VI9 C04 H33 SING N N 33 VI9 C04 H32 SING N N 34 VI9 C04 H31 SING N N 35 VI9 C15 H38 SING N N 36 VI9 C15 H37 SING N N 37 VI9 C20 H40 SING N N 38 VI9 C20 H39 SING N N 39 VI9 C21 H42 SING N N 40 VI9 C21 H41 SING N N 41 VI9 C22 H44 SING N N 42 VI9 C22 H43 SING N N 43 VI9 C03 H30 SING N N 44 VI9 N08 H34 SING N N 45 VI9 C14 H35 SING N N 46 VI9 C14 H36 SING N N 47 VI9 O26 H1 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VI9 SMILES ACDLabs 12.01 "O=C(Nc1sc(C)c(c1c1nc(no1)C(F)(F)F)C1CC1)C=1CCCC=1C(=O)O" VI9 InChI InChI 1.06 "InChI=1S/C18H16F3N3O4S/c1-7-11(8-5-6-8)12(14-23-17(24-28-14)18(19,20)21)15(29-7)22-13(25)9-3-2-4-10(9)16(26)27/h8H,2-6H2,1H3,(H,22,25)(H,26,27)" VI9 InChIKey InChI 1.06 JKQLCIPECSRXPD-UHFFFAOYSA-N VI9 SMILES_CANONICAL CACTVS 3.385 "Cc1sc(NC(=O)C2=C(CCC2)C(O)=O)c(c3onc(n3)C(F)(F)F)c1C4CC4" VI9 SMILES CACTVS 3.385 "Cc1sc(NC(=O)C2=C(CCC2)C(O)=O)c(c3onc(n3)C(F)(F)F)c1C4CC4" VI9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(s1)NC(=O)C2=C(CCC2)C(=O)O)c3nc(no3)C(F)(F)F)C4CC4" VI9 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(c(s1)NC(=O)C2=C(CCC2)C(=O)O)c3nc(no3)C(F)(F)F)C4CC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VI9 "SYSTEMATIC NAME" ACDLabs 12.01 "2-({(3P)-4-cyclopropyl-5-methyl-3-[3-(trifluoromethyl)-1,2,4-oxadiazol-5-yl]thiophen-2-yl}carbamoyl)cyclopent-1-ene-1-carboxylic acid" VI9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[4-cyclopropyl-5-methyl-3-[3-(trifluoromethyl)-1,2,4-oxadiazol-5-yl]thiophen-2-yl]carbamoyl]cyclopentene-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VI9 "Create component" 2023-05-09 RCSB VI9 "Initial release" 2023-06-14 RCSB #