data_VIZ
#
_chem_comp.id VIZ
_chem_comp.name "2-[(2~{Z})-2-[2-(naphthalen-2-ylmethylsulfonyl)ethanoylimino]-3-oxidanyl-1,3-thiazol-4-yl]ethanoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H16 N2 O6 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-07-27
_chem_comp.pdbx_modified_date 2023-12-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 420.459
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VIZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8K71
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VIZ C10 C1 C 0 1 N N N N N N 21.925 -25.388 6.171 3.441 0.408 0.094 C10 VIZ 1
VIZ C13 C2 C 0 1 N N N N N N 25.355 -24.865 4.882 -0.038 0.994 -0.983 C13 VIZ 2
VIZ C15 C3 C 0 1 N N N N N N 27.644 -26.551 3.906 -2.841 1.123 -1.252 C15 VIZ 3
VIZ C17 C4 C 0 1 Y N N N N N 29.030 -25.493 5.741 -4.831 1.693 0.160 C17 VIZ 4
VIZ C20 C5 C 0 1 Y N N N N N 30.183 -22.008 6.161 -7.969 -0.098 0.879 C20 VIZ 5
VIZ C21 C6 C 0 1 Y N N N N N 30.099 -20.788 5.510 -8.562 -1.276 0.541 C21 VIZ 6
VIZ C22 C7 C 0 1 Y N N N N N 29.406 -20.676 4.312 -7.933 -2.177 -0.316 C22 VIZ 7
VIZ C24 C8 C 0 1 Y N N N N N 28.883 -23.022 4.440 -6.062 -0.700 -0.513 C24 VIZ 8
VIZ C03 C9 C 0 1 N N N N N N 19.636 -25.859 7.228 5.662 0.094 0.658 C03 VIZ 9
VIZ C04 C10 C 0 1 N N N N N N 18.554 -26.357 8.179 7.142 0.240 0.415 C04 VIZ 10
VIZ C05 C11 C 0 1 N N N N N N 17.415 -25.347 8.290 7.617 -0.879 -0.476 C05 VIZ 11
VIZ C08 C12 C 0 1 N N N N N N 19.318 -25.060 5.966 5.191 -0.525 1.734 C08 VIZ 12
VIZ C12 C13 C 0 1 N N N N N N 23.844 -24.737 4.859 1.156 0.545 -0.181 C12 VIZ 13
VIZ C16 C14 C 0 1 Y N N N N N 28.348 -25.363 4.538 -4.202 0.792 -0.696 C16 VIZ 14
VIZ C18 C15 C 0 1 Y N N N N N 29.646 -24.380 6.288 -6.058 1.422 0.684 C18 VIZ 15
VIZ C19 C16 C 0 1 Y N N N N N 29.563 -23.142 5.623 -6.702 0.216 0.358 C19 VIZ 16
VIZ C23 C17 C 0 1 Y N N N N N 28.795 -21.792 3.769 -6.706 -1.906 -0.839 C23 VIZ 17
VIZ C25 C18 C 0 1 Y N N N N N 28.276 -24.145 3.884 -4.798 -0.383 -1.039 C25 VIZ 18
VIZ N02 N1 N 0 1 N N N N N N 21.268 -26.096 7.412 4.745 0.591 -0.214 N02 VIZ 19
VIZ N11 N2 N 0 1 N N N N N N 23.161 -25.363 5.977 2.382 0.806 -0.616 N11 VIZ 20
VIZ O01 O1 O 0 1 N N N N N N 21.939 -26.777 8.441 5.139 1.269 -1.393 O01 VIZ 21
VIZ O06 O2 O 0 1 N N N N N N 16.497 -25.325 7.426 6.834 -1.709 -0.873 O06 VIZ 22
VIZ O07 O3 O 0 1 N N N N N N 17.409 -24.532 9.247 8.910 -0.953 -0.828 O07 VIZ 23
VIZ O26 O4 O 0 1 N N N N N N 25.026 -27.194 3.538 -1.627 -0.927 -0.122 O26 VIZ 24
VIZ O27 O5 O 0 1 N N N N N N 25.777 -25.460 2.280 -1.646 1.200 1.097 O27 VIZ 25
VIZ O28 O6 O 0 1 N N N N N N 23.300 -24.152 3.979 0.996 -0.056 0.864 O28 VIZ 26
VIZ S09 S1 S 0 1 N N N N N N 20.700 -24.718 5.233 3.427 -0.449 1.588 S09 VIZ 27
VIZ S14 S2 S 0 1 N N N N N N 25.923 -26.041 3.616 -1.560 0.493 -0.132 S14 VIZ 28
VIZ H131 H1 H 0 0 N N N N N N 25.672 -25.221 5.873 -0.021 2.079 -1.085 H131 VIZ 29
VIZ H132 H2 H 0 0 N N N N N N 25.803 -23.880 4.686 -0.006 0.535 -1.971 H132 VIZ 30
VIZ H152 H3 H 0 0 N N N N N N 28.127 -26.816 2.954 -2.726 0.660 -2.232 H152 VIZ 31
VIZ H151 H4 H 0 0 N N N N N N 27.674 -27.416 4.585 -2.740 2.204 -1.347 H151 VIZ 32
VIZ H171 H5 H 0 0 N N N N N N 29.079 -26.448 6.242 -4.336 2.618 0.415 H171 VIZ 33
VIZ H201 H6 H 0 0 N N N N N N 30.730 -22.085 7.089 -8.469 0.590 1.544 H201 VIZ 34
VIZ H211 H7 H 0 0 N N N N N N 30.576 -19.918 5.937 -9.536 -1.515 0.943 H211 VIZ 35
VIZ H221 H8 H 0 0 N N N N N N 29.344 -19.723 3.807 -8.426 -3.104 -0.567 H221 VIZ 36
VIZ H041 H9 H 0 0 N N N N N N 18.995 -26.513 9.175 7.339 1.197 -0.067 H041 VIZ 37
VIZ H042 H10 H 0 0 N N N N N N 18.154 -27.310 7.802 7.672 0.197 1.367 H042 VIZ 38
VIZ H081 H11 H 0 0 N N N N N N 18.333 -24.775 5.627 5.763 -0.980 2.529 H081 VIZ 39
VIZ H181 H12 H 0 0 N N N N N N 30.187 -24.461 7.219 -6.534 2.130 1.347 H181 VIZ 40
VIZ H231 H13 H 0 0 N N N N N N 28.255 -21.718 2.837 -6.231 -2.614 -1.502 H231 VIZ 41
VIZ H251 H14 H 0 0 N N N N N N 27.750 -24.066 2.944 -4.298 -1.072 -1.704 H251 VIZ 42
VIZ H011 H15 H 0 0 N N N N N N 22.875 -26.750 8.281 4.399 1.577 -1.935 H011 VIZ 43
VIZ H1 H16 H 0 1 N N N N N N 16.649 -23.967 9.177 9.168 -1.688 -1.401 H1 VIZ 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VIZ N02 O01 SING N N 1
VIZ C03 N02 SING N N 2
VIZ C05 C04 SING N N 3
VIZ O06 C05 DOUB N N 4
VIZ O07 C05 SING N N 5
VIZ C04 C03 SING N N 6
VIZ C08 C03 DOUB N N 7
VIZ S09 C08 SING N N 8
VIZ C10 S09 SING N N 9
VIZ N11 C10 DOUB N N 10
VIZ C12 N11 SING N N 11
VIZ S14 C13 SING N N 12
VIZ C16 C15 SING N N 13
VIZ C17 C16 DOUB Y N 14
VIZ C18 C17 SING Y N 15
VIZ C19 C18 DOUB Y N 16
VIZ C21 C20 DOUB Y N 17
VIZ C22 C21 SING Y N 18
VIZ C23 C22 DOUB Y N 19
VIZ C20 C19 SING Y N 20
VIZ C24 C19 SING Y N 21
VIZ C25 C24 DOUB Y N 22
VIZ C15 S14 SING N N 23
VIZ O26 S14 DOUB N N 24
VIZ O27 S14 DOUB N N 25
VIZ C13 C12 SING N N 26
VIZ O28 C12 DOUB N N 27
VIZ N02 C10 SING N N 28
VIZ C16 C25 SING Y N 29
VIZ C23 C24 SING Y N 30
VIZ C13 H131 SING N N 31
VIZ C13 H132 SING N N 32
VIZ C15 H152 SING N N 33
VIZ C15 H151 SING N N 34
VIZ C17 H171 SING N N 35
VIZ C20 H201 SING N N 36
VIZ C21 H211 SING N N 37
VIZ C22 H221 SING N N 38
VIZ C04 H041 SING N N 39
VIZ C04 H042 SING N N 40
VIZ C08 H081 SING N N 41
VIZ C18 H181 SING N N 42
VIZ C23 H231 SING N N 43
VIZ C25 H251 SING N N 44
VIZ O01 H011 SING N N 45
VIZ O07 H1 SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VIZ InChI InChI 1.06 "InChI=1S/C18H16N2O6S2/c21-16(19-18-20(24)15(9-27-18)8-17(22)23)11-28(25,26)10-12-5-6-13-3-1-2-4-14(13)7-12/h1-7,9,24H,8,10-11H2,(H,22,23)/b19-18-"
VIZ InChIKey InChI 1.06 QNCNQHCDQMPPGD-HNENSFHCSA-N
VIZ SMILES_CANONICAL CACTVS 3.385 "ON1C(=CSC1=NC(=O)C[S](=O)(=O)Cc2ccc3ccccc3c2)CC(O)=O"
VIZ SMILES CACTVS 3.385 "ON1C(=CSC1=NC(=O)C[S](=O)(=O)Cc2ccc3ccccc3c2)CC(O)=O"
VIZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)CS(=O)(=O)CC(=O)/N=C\3/N(C(=CS3)CC(=O)O)O"
VIZ SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)CS(=O)(=O)CC(=O)N=C3N(C(=CS3)CC(=O)O)O"
#
_pdbx_chem_comp_identifier.comp_id VIZ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "2-[(2~{Z})-2-[2-(naphthalen-2-ylmethylsulfonyl)ethanoylimino]-3-oxidanyl-1,3-thiazol-4-yl]ethanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VIZ "Create component" 2023-07-27 PDBJ
VIZ "Initial release" 2023-12-13 RCSB
#