data_VJK # _chem_comp.id VJK _chem_comp.name "(2R)-2-methyl-2-[[2-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]-N-[2,2,2-tris(fluoranyl)ethyl]butanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 F3 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Decernotinib; Adelatinib; VX-509" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-20 _chem_comp.pdbx_modified_date 2020-05-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 392.378 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VJK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4YTI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VJK C1 C1 C 0 1 N N N 13.989 14.299 5.170 -1.877 2.951 0.833 C1 VJK 1 VJK C2 C2 C 0 1 N N R 15.383 14.891 5.437 -2.215 1.801 -0.118 C2 VJK 2 VJK C3 C3 C 0 1 N N N 15.412 15.639 6.757 -2.237 2.319 -1.558 C3 VJK 3 VJK C4 C4 C 0 1 N N N 15.781 15.888 4.329 -3.569 1.239 0.234 C4 VJK 4 VJK C5 C5 C 0 1 N N N 16.813 14.917 2.273 -5.189 -0.581 0.259 C5 VJK 5 VJK C6 C6 C 0 1 N N N 15.796 14.909 1.174 -5.275 -2.035 -0.209 C6 VJK 6 VJK C7 C7 C 0 1 Y N N 16.574 12.518 4.919 0.136 1.051 -0.184 C7 VJK 7 VJK C8 C8 C 0 1 Y N N 17.831 11.908 5.151 0.522 2.322 -0.618 C8 VJK 8 VJK C9 C9 C 0 1 Y N N 18.002 10.595 4.741 1.867 2.579 -0.796 C9 VJK 9 VJK C10 C10 C 0 1 Y N N 15.768 10.611 3.977 2.354 0.418 -0.151 C10 VJK 10 VJK C11 C11 C 0 1 Y N N 14.658 9.923 3.307 3.370 -0.624 0.110 C11 VJK 11 VJK C12 C12 C 0 1 Y N N 14.738 8.607 2.925 3.141 -1.898 0.522 C12 VJK 12 VJK C13 C13 C 0 1 Y N N 12.768 9.329 2.120 5.374 -1.733 0.326 C13 VJK 13 VJK F2 F1 F 0 1 N N N 16.271 14.430 0.112 -6.531 -2.556 0.118 F2 VJK 14 VJK F F2 F 0 1 N N N 15.360 16.057 0.878 -5.093 -2.090 -1.595 F VJK 15 VJK F1 F3 F 0 1 N N N 14.779 14.239 1.452 -4.279 -2.788 0.423 F1 VJK 16 VJK N N1 N 0 1 N N N 16.835 15.488 3.621 -3.873 -0.035 -0.083 N VJK 17 VJK O O1 O 0 1 N N N 15.125 16.911 4.101 -4.384 1.934 0.803 O VJK 18 VJK C C14 C 0 1 N N N 13.096 15.056 4.189 -1.729 2.408 2.256 C VJK 19 VJK N1 N2 N 0 1 N N N 16.359 13.791 5.475 -1.203 0.749 0.007 N1 VJK 20 VJK N3 N3 N 0 1 Y N N 15.551 11.889 4.317 1.071 0.133 0.036 N3 VJK 21 VJK N2 N4 N 0 1 Y N N 17.050 9.860 4.168 2.748 1.621 -0.552 N2 VJK 22 VJK C14 C15 C 0 1 Y N N 13.335 10.399 2.828 4.828 -0.488 -0.031 C14 VJK 23 VJK C15 C16 C 0 1 Y N N 12.667 11.620 2.745 5.676 0.551 -0.413 C15 VJK 24 VJK C16 C17 C 0 1 Y N N 11.519 11.730 1.960 7.038 0.309 -0.424 C16 VJK 25 VJK C17 C18 C 0 1 Y N N 11.060 10.624 1.285 7.508 -0.943 -0.060 C17 VJK 26 VJK N5 N5 N 0 1 Y N N 11.647 9.406 1.350 6.689 -1.910 0.296 N5 VJK 27 VJK N4 N6 N 0 1 Y N N 13.600 8.244 2.217 4.324 -2.559 0.654 N4 VJK 28 VJK H1 H1 H 0 1 N N N 13.459 14.249 6.132 -0.941 3.416 0.522 H1 VJK 29 VJK H2 H2 H 0 1 N N N 14.129 13.282 4.776 -2.677 3.691 0.807 H2 VJK 30 VJK H3 H3 H 0 1 N N N 15.132 14.956 7.572 -1.222 2.568 -1.870 H3 VJK 31 VJK H4 H4 H 0 1 N N N 16.425 16.028 6.936 -2.641 1.549 -2.215 H4 VJK 32 VJK H5 H5 H 0 1 N N N 14.700 16.476 6.720 -2.863 3.210 -1.614 H5 VJK 33 VJK H6 H6 H 0 1 N N N 16.999 13.847 2.451 -5.964 0.006 -0.233 H6 VJK 34 VJK H7 H7 H 0 1 N N N 17.695 15.368 1.795 -5.330 -0.537 1.339 H7 VJK 35 VJK H8 H8 H 0 1 N N N 18.632 12.449 5.633 -0.216 3.087 -0.810 H8 VJK 36 VJK H9 H9 H 0 1 N N N 18.969 10.139 4.896 2.198 3.551 -1.130 H9 VJK 37 VJK H10 H10 H 0 1 N N N 15.566 7.949 3.143 2.166 -2.322 0.716 H10 VJK 38 VJK H11 H11 H 0 1 N N N 17.731 15.587 4.053 -3.221 -0.590 -0.539 H11 VJK 39 VJK H12 H12 H 0 1 N N N 12.134 14.531 4.088 -1.488 3.227 2.934 H12 VJK 40 VJK H13 H13 H 0 1 N N N 12.920 16.075 4.565 -2.664 1.943 2.567 H13 VJK 41 VJK H14 H14 H 0 1 N N N 13.591 15.107 3.208 -0.929 1.668 2.282 H14 VJK 42 VJK H15 H15 H 0 1 N N N 16.385 13.585 6.453 -1.469 -0.158 0.224 H15 VJK 43 VJK H16 H16 H 0 1 N N N 13.037 12.478 3.287 5.282 1.517 -0.692 H16 VJK 44 VJK H17 H17 H 0 1 N N N 10.997 12.673 1.884 7.728 1.087 -0.715 H17 VJK 45 VJK H18 H18 H 0 1 N N N 10.181 10.733 0.667 8.572 -1.131 -0.070 H18 VJK 46 VJK H19 H19 H 0 1 N N N 13.417 7.337 1.839 4.413 -3.482 0.939 H19 VJK 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VJK F2 C6 SING N N 1 VJK F C6 SING N N 2 VJK C6 F1 SING N N 3 VJK C6 C5 SING N N 4 VJK C17 N5 DOUB Y N 5 VJK C17 C16 SING Y N 6 VJK N5 C13 SING Y N 7 VJK C16 C15 DOUB Y N 8 VJK C13 N4 SING Y N 9 VJK C13 C14 DOUB Y N 10 VJK N4 C12 SING Y N 11 VJK C5 N SING N N 12 VJK C15 C14 SING Y N 13 VJK C14 C11 SING Y N 14 VJK C12 C11 DOUB Y N 15 VJK C11 C10 SING N N 16 VJK N C4 SING N N 17 VJK C10 N2 DOUB Y N 18 VJK C10 N3 SING Y N 19 VJK O C4 DOUB N N 20 VJK N2 C9 SING Y N 21 VJK C C1 SING N N 22 VJK N3 C7 DOUB Y N 23 VJK C4 C2 SING N N 24 VJK C9 C8 DOUB Y N 25 VJK C7 C8 SING Y N 26 VJK C7 N1 SING N N 27 VJK C1 C2 SING N N 28 VJK C2 N1 SING N N 29 VJK C2 C3 SING N N 30 VJK C1 H1 SING N N 31 VJK C1 H2 SING N N 32 VJK C3 H3 SING N N 33 VJK C3 H4 SING N N 34 VJK C3 H5 SING N N 35 VJK C5 H6 SING N N 36 VJK C5 H7 SING N N 37 VJK C8 H8 SING N N 38 VJK C9 H9 SING N N 39 VJK C12 H10 SING N N 40 VJK N H11 SING N N 41 VJK C H12 SING N N 42 VJK C H13 SING N N 43 VJK C H14 SING N N 44 VJK N1 H15 SING N N 45 VJK C15 H16 SING N N 46 VJK C16 H17 SING N N 47 VJK C17 H18 SING N N 48 VJK N4 H19 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VJK SMILES ACDLabs 12.01 "C(C(Nc1ccnc(n1)c2cnc3c2cccn3)(C)C(NCC(F)(F)F)=O)C" VJK InChI InChI 1.03 "InChI=1S/C18H19F3N6O/c1-3-17(2,16(28)25-10-18(19,20)21)27-13-6-8-23-15(26-13)12-9-24-14-11(12)5-4-7-22-14/h4-9H,3,10H2,1-2H3,(H,22,24)(H,25,28)(H,23,26,27)/t17-/m1/s1" VJK InChIKey InChI 1.03 ASUGUQWIHMTFJL-QGZVFWFLSA-N VJK SMILES_CANONICAL CACTVS 3.385 "CC[C@@](C)(Nc1ccnc(n1)c2c[nH]c3ncccc23)C(=O)NCC(F)(F)F" VJK SMILES CACTVS 3.385 "CC[C](C)(Nc1ccnc(n1)c2c[nH]c3ncccc23)C(=O)NCC(F)(F)F" VJK SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC[C@](C)(C(=O)NCC(F)(F)F)Nc1ccnc(n1)c2c[nH]c3c2cccn3" VJK SMILES "OpenEye OEToolkits" 1.9.2 "CCC(C)(C(=O)NCC(F)(F)F)Nc1ccnc(n1)c2c[nH]c3c2cccn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VJK "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-[2-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]-N-(2,2,2-trifluoroethyl)-D-isovalinamide" VJK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2R)-2-methyl-2-[[2-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]-N-[2,2,2-tris(fluoranyl)ethyl]butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VJK "Create component" 2015-03-20 RCSB VJK "Initial release" 2015-08-12 RCSB VJK "Modify synonyms" 2020-05-26 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 VJK Decernotinib ? ? 2 VJK Adelatinib ? ? 3 VJK VX-509 ? ? #