data_VJQ # _chem_comp.id VJQ _chem_comp.name "3-[(S)-dioxidanyl(phenyl)methyl]-4-methyl-2-oxidanyl-1H-1,4-benzodiazepin-5-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-20 _chem_comp.pdbx_modified_date 2022-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 312.320 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VJQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OLM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VJQ C4 C1 C 0 1 N N N -25.165 -20.262 -3.101 1.208 -0.213 1.570 C4 VJQ 1 VJQ C7 C2 C 0 1 N N N -25.511 -22.660 -3.499 -0.306 -1.121 -0.106 C7 VJQ 2 VJQ C8 C3 C 0 1 N N S -24.598 -23.805 -3.038 -1.749 -0.917 -0.493 C8 VJQ 3 VJQ C10 C4 C 0 1 Y N N -24.680 -25.490 -1.118 -1.801 1.339 -1.576 C10 VJQ 4 VJQ C13 C5 C 0 1 Y N N -23.000 -23.891 0.355 -2.936 2.470 0.677 C13 VJQ 5 VJQ C15 C6 C 0 1 N N N -25.907 -22.711 -4.831 0.532 -1.579 -1.018 C15 VJQ 6 VJQ C20 C7 C 0 1 Y N N -22.969 -19.448 -6.756 4.384 0.985 -0.976 C20 VJQ 7 VJQ O16 O1 O 0 1 N N N -26.548 -23.615 -5.284 0.052 -1.939 -2.238 O16 VJQ 8 VJQ N17 N1 N 0 1 N N N -25.715 -21.624 -5.745 1.901 -1.702 -0.762 N17 VJQ 9 VJQ C18 C8 C 0 1 Y N N -24.710 -20.702 -5.605 2.626 -0.560 -0.452 C18 VJQ 10 VJQ C3 C9 C 0 1 Y N N -24.430 -20.055 -4.411 2.275 0.221 0.656 C3 VJQ 11 VJQ C19 C10 C 0 1 Y N N -23.963 -20.365 -6.741 3.690 -0.176 -1.257 C19 VJQ 12 VJQ C1 C11 C 0 1 Y N N -22.649 -18.803 -5.587 4.012 1.783 0.087 C1 VJQ 13 VJQ C2 C12 C 0 1 Y N N -23.402 -19.118 -4.459 2.967 1.408 0.906 C2 VJQ 14 VJQ N6 N2 N 0 1 N N N -25.606 -21.504 -2.706 0.083 -0.816 1.201 N6 VJQ 15 VJQ C23 C13 C 0 1 N N N -26.215 -21.681 -1.409 -0.841 -1.200 2.271 C23 VJQ 16 VJQ O5 O2 O 0 1 N N N -25.378 -19.299 -2.442 1.371 -0.009 2.757 O5 VJQ 17 VJQ C9 C14 C 0 1 Y N N -24.245 -24.274 -1.592 -2.072 0.554 -0.470 C9 VJQ 18 VJQ C14 C15 C 0 1 Y N N -23.368 -23.452 -0.905 -2.639 1.120 0.656 C14 VJQ 19 VJQ C12 C16 C 0 1 Y N N -23.467 -25.085 0.834 -2.670 3.253 -0.431 C12 VJQ 20 VJQ C11 C17 C 0 1 Y N N -24.317 -25.921 0.121 -2.097 2.689 -1.555 C11 VJQ 21 VJQ O17 O3 O 0 1 N N N -22.854 -23.317 -4.850 -3.856 -2.077 -0.146 O17 VJQ 22 VJQ O18 O4 O 0 1 N N N -23.044 -23.352 -3.583 -2.592 -1.605 0.433 O18 VJQ 23 VJQ H2 H2 H 0 1 N N N -24.869 -24.701 -3.616 -1.915 -1.310 -1.496 H2 VJQ 24 VJQ H3 H3 H 0 1 N N N -25.315 -26.108 -1.735 -1.354 0.898 -2.454 H3 VJQ 25 VJQ H4 H4 H 0 1 N N N -22.341 -23.289 0.963 -3.384 2.911 1.556 H4 VJQ 26 VJQ H5 H5 H 0 1 N N N -22.437 -19.227 -7.670 5.213 1.280 -1.602 H5 VJQ 27 VJQ H6 H6 H 0 1 N N N -26.342 -21.534 -6.519 2.331 -2.572 -0.791 H6 VJQ 28 VJQ H7 H7 H 0 1 N N N -24.196 -20.871 -7.666 3.986 -0.793 -2.092 H7 VJQ 29 VJQ H8 H8 H 0 1 N N N -21.847 -18.081 -5.544 4.552 2.696 0.289 H8 VJQ 30 VJQ H9 H9 H 0 1 N N N -23.169 -18.591 -3.545 2.685 2.033 1.741 H9 VJQ 31 VJQ H10 H10 H 0 1 N N N -26.237 -20.717 -0.879 -0.412 -0.930 3.236 H10 VJQ 32 VJQ H11 H11 H 0 1 N N N -27.242 -22.054 -1.534 -1.789 -0.678 2.137 H11 VJQ 33 VJQ H12 H12 H 0 1 N N N -25.630 -22.407 -0.825 -1.010 -2.276 2.237 H12 VJQ 34 VJQ H13 H13 H 0 1 N N N -22.996 -22.529 -1.325 -2.851 0.507 1.520 H13 VJQ 35 VJQ H14 H14 H 0 1 N N N -23.157 -25.394 1.821 -2.911 4.306 -0.418 H14 VJQ 36 VJQ H15 H15 H 0 1 N N N -24.669 -26.858 0.526 -1.881 3.303 -2.417 H15 VJQ 37 VJQ H16 H16 H 0 1 N N N -21.959 -23.054 -5.029 -4.427 -2.542 0.481 H16 VJQ 38 VJQ H1 H1 H 0 1 N N N -26.638 -24.299 -4.631 0.729 -2.264 -2.847 H1 VJQ 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VJQ C20 C19 DOUB Y N 1 VJQ C20 C1 SING Y N 2 VJQ C19 C18 SING Y N 3 VJQ N17 C18 SING N N 4 VJQ N17 C15 SING N N 5 VJQ C18 C3 DOUB Y N 6 VJQ C1 C2 DOUB Y N 7 VJQ O16 C15 SING N N 8 VJQ O17 O18 SING N N 9 VJQ C15 C7 DOUB N N 10 VJQ C2 C3 SING Y N 11 VJQ C3 C4 SING N N 12 VJQ O18 C8 SING N N 13 VJQ C7 C8 SING N N 14 VJQ C7 N6 SING N N 15 VJQ C4 N6 SING N N 16 VJQ C4 O5 DOUB N N 17 VJQ C8 C9 SING N N 18 VJQ N6 C23 SING N N 19 VJQ C9 C10 DOUB Y N 20 VJQ C9 C14 SING Y N 21 VJQ C10 C11 SING Y N 22 VJQ C14 C13 DOUB Y N 23 VJQ C11 C12 DOUB Y N 24 VJQ C13 C12 SING Y N 25 VJQ C8 H2 SING N N 26 VJQ C10 H3 SING N N 27 VJQ C13 H4 SING N N 28 VJQ C20 H5 SING N N 29 VJQ N17 H6 SING N N 30 VJQ C19 H7 SING N N 31 VJQ C1 H8 SING N N 32 VJQ C2 H9 SING N N 33 VJQ C23 H10 SING N N 34 VJQ C23 H11 SING N N 35 VJQ C23 H12 SING N N 36 VJQ C14 H13 SING N N 37 VJQ C12 H14 SING N N 38 VJQ C11 H15 SING N N 39 VJQ O17 H16 SING N N 40 VJQ O16 H1 SING N N 41 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VJQ InChI InChI 1.03 "InChI=1S/C17H16N2O4/c1-19-14(15(23-22)11-7-3-2-4-8-11)16(20)18-13-10-6-5-9-12(13)17(19)21/h2-10,15,18,20,22H,1H3/t15-/m0/s1" VJQ InChIKey InChI 1.03 UBACWKZQZWEXFD-HNNXBMFYSA-N VJQ SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)c2ccccc2NC(=C1[C@@H](OO)c3ccccc3)O" VJQ SMILES CACTVS 3.385 "CN1C(=O)c2ccccc2NC(=C1[CH](OO)c3ccccc3)O" VJQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C(=O)c2ccccc2NC(=C1[C@H](c3ccccc3)OO)O" VJQ SMILES "OpenEye OEToolkits" 2.0.7 "CN1C(=O)c2ccccc2NC(=C1C(c3ccccc3)OO)O" # _pdbx_chem_comp_identifier.comp_id VJQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[(~{S})-dioxidanyl(phenyl)methyl]-4-methyl-2-oxidanyl-1~{H}-1,4-benzodiazepin-5-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VJQ "Create component" 2021-05-20 PDBE VJQ "Modify coordinates" 2021-05-25 PDBE VJQ "Modify coordinates" 2021-07-10 PDBE VJQ "Initial release" 2022-06-01 RCSB ##