data_VJS # _chem_comp.id VJS _chem_comp.name "{(1R,2R)-2-[4-(carboxymethyl)benzene-1-carbonyl]cyclopentyl}propanedioic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H18 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-17 _chem_comp.pdbx_modified_date 2021-09-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 334.321 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VJS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JT5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VJS C12 C1 C 0 1 N N N -2.100 -33.354 20.598 4.738 0.449 -0.252 C12 VJS 1 VJS C15 C2 C 0 1 Y N N 1.920 -32.481 21.985 -1.076 0.017 0.491 C15 VJS 2 VJS C16 C3 C 0 1 Y N N 2.048 -32.527 23.367 -1.905 0.671 1.408 C16 VJS 3 VJS C17 C4 C 0 1 Y N N 2.889 -31.635 24.022 -3.194 1.004 1.051 C17 VJS 4 VJS C18 C5 C 0 1 Y N N 2.631 -31.535 21.266 -1.562 -0.294 -0.783 C18 VJS 5 VJS C19 C6 C 0 1 Y N N 3.465 -30.643 21.918 -2.854 0.046 -1.125 C19 VJS 6 VJS C20 C7 C 0 1 Y N N 3.594 -30.688 23.295 -3.669 0.692 -0.212 C20 VJS 7 VJS C21 C8 C 0 1 N N N 4.533 -29.696 23.978 -5.080 1.059 -0.594 C21 VJS 8 VJS C22 C9 C 0 1 N N N 3.962 -29.016 25.216 -6.007 -0.075 -0.239 C22 VJS 9 VJS C02 C10 C 0 1 N N N 1.013 -33.448 21.220 0.304 -0.337 0.863 C02 VJS 10 VJS C03 C11 C 0 1 N N R 0.408 -34.580 21.846 1.194 -1.041 -0.129 C03 VJS 11 VJS C04 C12 C 0 1 N N N 1.540 -35.651 22.213 0.986 -2.574 -0.050 C04 VJS 12 VJS C05 C13 C 0 1 N N N 0.926 -36.863 22.154 2.316 -3.129 -0.618 C05 VJS 13 VJS C06 C14 C 0 1 N N N -0.479 -36.676 21.303 3.391 -2.169 -0.070 C06 VJS 14 VJS C07 C15 C 0 1 N N R -0.501 -35.380 20.832 2.678 -0.841 0.241 C07 VJS 15 VJS C08 C16 C 0 1 N N N -1.988 -34.875 20.755 3.280 0.287 -0.599 C08 VJS 16 VJS C09 C17 C 0 1 N N N -2.685 -35.542 19.567 2.549 1.573 -0.311 C09 VJS 17 VJS O01 O1 O 0 1 N N N 0.823 -33.246 20.066 0.724 -0.061 1.966 O01 VJS 18 VJS O10 O2 O 0 1 N N N -3.924 -35.760 19.591 1.231 1.663 -0.545 O10 VJS 19 VJS O11 O3 O 0 1 N N N -2.023 -35.862 18.544 3.150 2.523 0.131 O11 VJS 20 VJS O13 O4 O 0 1 N N N -2.013 -32.822 19.460 5.244 -0.268 0.578 O13 VJS 21 VJS O14 O5 O 0 1 N N N -2.284 -32.620 21.603 5.474 1.386 -0.869 O14 VJS 22 VJS O23 O6 O 0 1 N N N 4.404 -29.322 26.355 -7.321 0.029 -0.491 O23 VJS 23 VJS O24 O7 O 0 1 N N N 3.059 -28.150 25.094 -5.567 -1.078 0.271 O24 VJS 24 VJS H1 H1 H 0 1 N N N 1.492 -33.258 23.935 -1.536 0.914 2.394 H1 VJS 25 VJS H2 H2 H 0 1 N N N 2.993 -31.680 25.096 -3.836 1.509 1.758 H2 VJS 26 VJS H3 H3 H 0 1 N N N 2.534 -31.493 20.191 -0.928 -0.799 -1.496 H3 VJS 27 VJS H4 H4 H 0 1 N N N 4.017 -29.909 21.350 -3.232 -0.194 -2.108 H4 VJS 28 VJS H5 H5 H 0 1 N N N 5.443 -30.237 24.275 -5.381 1.957 -0.054 H5 VJS 29 VJS H6 H6 H 0 1 N N N 4.793 -28.915 23.249 -5.129 1.246 -1.666 H6 VJS 30 VJS H7 H7 H 0 1 N N N -0.165 -34.312 22.746 0.998 -0.681 -1.139 H7 VJS 31 VJS H8 H8 H 0 1 N N N 2.365 -35.602 21.487 0.845 -2.892 0.983 H8 VJS 32 VJS H9 H9 H 0 1 N N N 1.930 -35.467 23.225 0.141 -2.882 -0.666 H9 VJS 33 VJS H10 H10 H 0 1 N N N 0.703 -37.220 23.170 2.491 -4.143 -0.259 H10 VJS 34 VJS H11 H11 H 0 1 N N N 1.578 -37.589 21.645 2.303 -3.109 -1.708 H11 VJS 35 VJS H12 H12 H 0 1 N N N -1.344 -36.853 21.959 3.830 -2.579 0.839 H12 VJS 36 VJS H13 H13 H 0 1 N N N -0.507 -37.383 20.461 4.167 -2.010 -0.820 H13 VJS 37 VJS H14 H14 H 0 1 N N N -0.053 -35.310 19.830 2.770 -0.608 1.302 H14 VJS 38 VJS H15 H15 H 0 1 N N N -2.502 -35.174 21.681 3.183 0.043 -1.657 H15 VJS 39 VJS H16 H16 H 0 1 N N N -4.191 -36.163 18.773 0.805 2.508 -0.344 H16 VJS 40 VJS H17 H17 H 0 1 N N N -2.332 -31.712 21.328 6.405 1.452 -0.613 H17 VJS 41 VJS H18 H18 H 0 1 N N N 3.954 -28.811 27.018 -7.876 -0.724 -0.246 H18 VJS 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VJS O11 C09 DOUB N N 1 VJS O13 C12 DOUB N N 2 VJS C09 O10 SING N N 3 VJS C09 C08 SING N N 4 VJS O01 C02 DOUB N N 5 VJS C12 C08 SING N N 6 VJS C12 O14 SING N N 7 VJS C08 C07 SING N N 8 VJS C07 C06 SING N N 9 VJS C07 C03 SING N N 10 VJS C02 C03 SING N N 11 VJS C02 C15 SING N N 12 VJS C18 C19 DOUB Y N 13 VJS C18 C15 SING Y N 14 VJS C06 C05 SING N N 15 VJS C03 C04 SING N N 16 VJS C19 C20 SING Y N 17 VJS C15 C16 DOUB Y N 18 VJS C05 C04 SING N N 19 VJS C20 C21 SING N N 20 VJS C20 C17 DOUB Y N 21 VJS C16 C17 SING Y N 22 VJS C21 C22 SING N N 23 VJS O24 C22 DOUB N N 24 VJS C22 O23 SING N N 25 VJS C16 H1 SING N N 26 VJS C17 H2 SING N N 27 VJS C18 H3 SING N N 28 VJS C19 H4 SING N N 29 VJS C21 H5 SING N N 30 VJS C21 H6 SING N N 31 VJS C03 H7 SING N N 32 VJS C04 H8 SING N N 33 VJS C04 H9 SING N N 34 VJS C05 H10 SING N N 35 VJS C05 H11 SING N N 36 VJS C06 H12 SING N N 37 VJS C06 H13 SING N N 38 VJS C07 H14 SING N N 39 VJS C08 H15 SING N N 40 VJS O10 H16 SING N N 41 VJS O14 H17 SING N N 42 VJS O23 H18 SING N N 43 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VJS SMILES ACDLabs 12.01 "C(C(C2C(C(c1ccc(cc1)CC(O)=O)=O)CCC2)C(O)=O)(O)=O" VJS InChI InChI 1.03 "InChI=1S/C17H18O7/c18-13(19)8-9-4-6-10(7-5-9)15(20)12-3-1-2-11(12)14(16(21)22)17(23)24/h4-7,11-12,14H,1-3,8H2,(H,18,19)(H,21,22)(H,23,24)/t11-,12-/m1/s1" VJS InChIKey InChI 1.03 HXTDFADOGPNOAK-VXGBXAGGSA-N VJS SMILES_CANONICAL CACTVS 3.385 "OC(=O)Cc1ccc(cc1)C(=O)[C@@H]2CCC[C@H]2C(C(O)=O)C(O)=O" VJS SMILES CACTVS 3.385 "OC(=O)Cc1ccc(cc1)C(=O)[CH]2CCC[CH]2C(C(O)=O)C(O)=O" VJS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CC(=O)O)C(=O)[C@@H]2CCC[C@H]2C(C(=O)O)C(=O)O" VJS SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CC(=O)O)C(=O)C2CCCC2C(C(=O)O)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VJS "SYSTEMATIC NAME" ACDLabs 12.01 "{(1R,2R)-2-[4-(carboxymethyl)benzene-1-carbonyl]cyclopentyl}propanedioic acid" VJS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(1~{R},2~{R})-2-[4-(2-hydroxy-2-oxoethyl)phenyl]carbonylcyclopentyl]propanedioic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VJS "Create component" 2020-08-17 RCSB VJS "Initial release" 2021-09-08 RCSB ##