data_VK2 # _chem_comp.id VK2 _chem_comp.name "4-[4-[5-[imidazo[1,2-a]pyridin-6-ylmethyl(methyl)amino]-1,3,4-oxadiazol-2-yl]-3-methyl-phenyl]-2,5-dimethyl-pyrazole-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H22 N8 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-20 _chem_comp.pdbx_modified_date 2021-09-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 438.484 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VK2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OLV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VK2 C1 C1 C 0 1 N N N 27.025 15.099 20.211 4.565 1.988 0.521 C1 VK2 1 VK2 C2 C2 C 0 1 Y N N 26.050 15.821 19.316 5.279 0.670 0.365 C2 VK2 2 VK2 C3 C3 C 0 1 Y N N 24.733 16.242 19.811 4.916 -0.422 1.171 C3 VK2 3 VK2 N6 N1 N 0 1 Y N N 23.747 6.248 28.053 -7.450 -1.012 -0.540 N6 VK2 4 VK2 C7 C4 C 0 1 Y N N 25.545 17.085 15.874 7.922 -1.043 -1.545 C7 VK2 5 VK2 C8 C5 C 0 1 Y N N 26.352 16.071 18.025 6.260 0.542 -0.552 C8 VK2 6 VK2 C9 C6 C 0 1 Y N N 26.150 13.614 21.925 2.156 1.535 0.267 C9 VK2 7 VK2 C10 C7 C 0 1 Y N N 25.502 12.512 23.621 0.090 0.975 0.550 C10 VK2 8 VK2 C11 C8 C 0 1 Y N N 25.205 11.340 24.449 -1.348 0.725 0.330 C11 VK2 9 VK2 C12 C9 C 0 1 Y N N 25.697 10.101 24.026 -1.924 1.002 -0.913 C12 VK2 10 VK2 C13 C10 C 0 1 Y N N 25.482 8.964 24.783 -3.265 0.767 -1.118 C13 VK2 11 VK2 C14 C11 C 0 1 Y N N 24.770 9.036 25.970 -4.049 0.253 -0.084 C14 VK2 12 VK2 C15 C12 C 0 1 Y N N 24.307 10.274 26.407 -3.475 -0.024 1.158 C15 VK2 13 VK2 C16 C13 C 0 1 Y N N 24.508 11.437 25.667 -2.134 0.204 1.362 C16 VK2 14 VK2 C19 C14 C 0 1 Y N N 25.609 7.035 27.376 -6.477 0.969 -0.563 C19 VK2 15 VK2 C20 C15 C 0 1 N N N 27.090 7.150 27.220 -6.243 2.454 -0.666 C20 VK2 16 VK2 C21 C16 C 0 1 N N N 22.869 5.334 28.769 -8.498 -2.031 -0.625 C21 VK2 17 VK2 C22 C17 C 0 1 Y N N 23.412 7.320 27.280 -6.125 -1.240 -0.292 C22 VK2 18 VK2 N7 N2 N 0 1 N N N 20.960 7.985 26.909 -5.017 -3.520 0.118 N7 VK2 19 VK2 C23 C18 C 0 1 N N N 22.056 7.699 27.062 -5.507 -2.511 -0.064 C23 VK2 20 VK2 N5 N3 N 0 1 Y N N 25.094 6.072 28.113 -7.628 0.367 -0.705 N5 VK2 21 VK2 C18 C19 C 0 1 Y N N 24.573 7.835 26.813 -5.492 0.001 -0.305 C18 VK2 22 VK2 C17 C20 C 0 1 N N N 23.959 12.730 26.208 -1.513 -0.100 2.701 C17 VK2 23 VK2 O O1 O 0 1 Y N N 25.944 12.334 22.330 0.963 1.472 -0.354 O VK2 24 VK2 N3 N4 N 0 1 Y N N 25.494 13.753 23.975 0.755 0.757 1.659 N3 VK2 25 VK2 N4 N5 N 0 1 Y N N 25.898 14.486 22.857 1.986 1.090 1.490 N4 VK2 26 VK2 N N6 N 0 1 N N N 26.571 13.788 20.667 3.341 1.979 -0.284 N VK2 27 VK2 C C21 C 0 1 N N N 26.561 12.710 19.683 3.375 2.441 -1.673 C VK2 28 VK2 N2 N7 N 0 1 Y N N 25.446 16.724 17.205 6.913 -0.646 -0.711 N2 VK2 29 VK2 C6 C22 C 0 1 Y N N 24.377 17.694 15.566 8.181 -2.341 -1.269 C6 VK2 30 VK2 N1 N8 N 0 1 Y N N 23.531 17.737 16.658 7.360 -2.741 -0.294 N1 VK2 31 VK2 C5 C23 C 0 1 Y N N 24.194 17.138 17.647 6.581 -1.729 0.061 C5 VK2 32 VK2 C4 C24 C 0 1 Y N N 23.841 16.880 19.001 5.562 -1.610 1.028 C4 VK2 33 VK2 H1 H1 H 0 1 N N N 27.965 14.963 19.656 4.309 2.140 1.570 H1 VK2 34 VK2 H2 H2 H 0 1 N N N 27.209 15.726 21.096 5.215 2.795 0.185 H2 VK2 35 VK2 H3 H3 H 0 1 N N N 24.466 16.042 20.838 4.127 -0.318 1.902 H3 VK2 36 VK2 H4 H4 H 0 1 N N N 26.384 16.915 15.215 8.419 -0.434 -2.286 H4 VK2 37 VK2 H5 H5 H 0 1 N N N 27.307 15.760 17.628 6.532 1.388 -1.167 H5 VK2 38 VK2 H6 H6 H 0 1 N N N 26.249 10.032 23.101 -1.317 1.400 -1.713 H6 VK2 39 VK2 H7 H7 H 0 1 N N N 25.871 8.014 24.447 -3.710 0.982 -2.078 H7 VK2 40 VK2 H8 H8 H 0 1 N N N 23.777 10.334 27.346 -4.083 -0.422 1.957 H8 VK2 41 VK2 H9 H9 H 0 1 N N N 27.583 6.348 27.790 -6.362 2.910 0.317 H9 VK2 42 VK2 H10 H10 H 0 1 N N N 27.355 7.060 26.156 -5.233 2.638 -1.032 H10 VK2 43 VK2 H11 H11 H 0 1 N N N 27.424 8.127 27.599 -6.965 2.888 -1.357 H11 VK2 44 VK2 H12 H12 H 0 1 N N N 23.473 4.579 29.292 -8.582 -2.382 -1.654 H12 VK2 45 VK2 H13 H13 H 0 1 N N N 22.272 5.897 29.501 -8.244 -2.869 0.024 H13 VK2 46 VK2 H14 H14 H 0 1 N N N 22.198 4.835 28.054 -9.449 -1.602 -0.308 H14 VK2 47 VK2 H15 H15 H 0 1 N N N 22.933 12.877 25.839 -1.578 0.780 3.341 H15 VK2 48 VK2 H16 H16 H 0 1 N N N 23.951 12.693 27.307 -2.045 -0.929 3.168 H16 VK2 49 VK2 H17 H17 H 0 1 N N N 24.592 13.565 25.874 -0.466 -0.372 2.563 H17 VK2 50 VK2 H18 H18 H 0 1 N N N 26.200 11.785 20.156 3.597 1.600 -2.331 H18 VK2 51 VK2 H19 H19 H 0 1 N N N 25.895 12.980 18.850 2.407 2.865 -1.939 H19 VK2 52 VK2 H20 H20 H 0 1 N N N 27.580 12.553 19.301 4.148 3.202 -1.784 H20 VK2 53 VK2 H21 H21 H 0 1 N N N 24.137 18.095 14.592 8.926 -2.952 -1.755 H21 VK2 54 VK2 H22 H22 H 0 1 N N N 22.878 17.186 19.383 5.292 -2.456 1.642 H22 VK2 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VK2 C6 C7 DOUB Y N 1 VK2 C6 N1 SING Y N 2 VK2 C7 N2 SING Y N 3 VK2 N1 C5 DOUB Y N 4 VK2 N2 C5 SING Y N 5 VK2 N2 C8 SING Y N 6 VK2 C5 C4 SING Y N 7 VK2 C8 C2 DOUB Y N 8 VK2 C4 C3 DOUB Y N 9 VK2 C2 C3 SING Y N 10 VK2 C2 C1 SING N N 11 VK2 C N SING N N 12 VK2 C1 N SING N N 13 VK2 N C9 SING N N 14 VK2 C9 O SING Y N 15 VK2 C9 N4 DOUB Y N 16 VK2 O C10 SING Y N 17 VK2 N4 N3 SING Y N 18 VK2 C10 N3 DOUB Y N 19 VK2 C10 C11 SING N N 20 VK2 C12 C11 DOUB Y N 21 VK2 C12 C13 SING Y N 22 VK2 C11 C16 SING Y N 23 VK2 C13 C14 DOUB Y N 24 VK2 C16 C17 SING N N 25 VK2 C16 C15 DOUB Y N 26 VK2 C14 C15 SING Y N 27 VK2 C14 C18 SING N N 28 VK2 C18 C22 DOUB Y N 29 VK2 C18 C19 SING Y N 30 VK2 N7 C23 TRIP N N 31 VK2 C23 C22 SING N N 32 VK2 C20 C19 SING N N 33 VK2 C22 N6 SING Y N 34 VK2 C19 N5 DOUB Y N 35 VK2 N6 N5 SING Y N 36 VK2 N6 C21 SING N N 37 VK2 C1 H1 SING N N 38 VK2 C1 H2 SING N N 39 VK2 C3 H3 SING N N 40 VK2 C7 H4 SING N N 41 VK2 C8 H5 SING N N 42 VK2 C12 H6 SING N N 43 VK2 C13 H7 SING N N 44 VK2 C15 H8 SING N N 45 VK2 C20 H9 SING N N 46 VK2 C20 H10 SING N N 47 VK2 C20 H11 SING N N 48 VK2 C21 H12 SING N N 49 VK2 C21 H13 SING N N 50 VK2 C21 H14 SING N N 51 VK2 C17 H15 SING N N 52 VK2 C17 H16 SING N N 53 VK2 C17 H17 SING N N 54 VK2 C H18 SING N N 55 VK2 C H19 SING N N 56 VK2 C H20 SING N N 57 VK2 C6 H21 SING N N 58 VK2 C4 H22 SING N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VK2 InChI InChI 1.03 "InChI=1S/C24H22N8O/c1-15-11-18(22-16(2)29-31(4)20(22)12-25)6-7-19(15)23-27-28-24(33-23)30(3)13-17-5-8-21-26-9-10-32(21)14-17/h5-11,14H,13H2,1-4H3" VK2 InChIKey InChI 1.03 LOJVVUQLHLHRMD-UHFFFAOYSA-N VK2 SMILES_CANONICAL CACTVS 3.385 "CN(Cc1ccc2nccn2c1)c3oc(nn3)c4ccc(cc4C)c5c(C)nn(C)c5C#N" VK2 SMILES CACTVS 3.385 "CN(Cc1ccc2nccn2c1)c3oc(nn3)c4ccc(cc4C)c5c(C)nn(C)c5C#N" VK2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1c2nnc(o2)N(C)Cc3ccc4nccn4c3)c5c(nn(c5C#N)C)C" VK2 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1c2nnc(o2)N(C)Cc3ccc4nccn4c3)c5c(nn(c5C#N)C)C" # _pdbx_chem_comp_identifier.comp_id VK2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[4-[5-[imidazo[1,2-a]pyridin-6-ylmethyl(methyl)amino]-1,3,4-oxadiazol-2-yl]-3-methyl-phenyl]-2,5-dimethyl-pyrazole-3-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VK2 "Create component" 2021-05-20 PDBE VK2 "Initial release" 2021-09-15 RCSB ##