data_VKG # _chem_comp.id VKG _chem_comp.name "N-(3-{3-cyclopropyl-5-[(2-fluoro-4-iodophenyl)amino]-6,8-dimethyl-2,4,7-trioxo-3,4,6,7-tetrahydropyrido[4,3-d]pyrimidin-1(2H)-yl}phenyl)-N'-methylsulfuric diamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H24 F I N6 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-21 _chem_comp.pdbx_modified_date 2020-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 666.463 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VKG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JV1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VKG C01 C1 C 0 1 N N N -20.641 48.024 6.212 -4.881 3.931 0.517 C01 VKG 1 VKG C07 C2 C 0 1 Y N N -18.872 47.009 8.941 -5.278 0.316 -0.911 C07 VKG 2 VKG C08 C3 C 0 1 Y N N -20.046 46.668 9.619 -6.227 -0.517 -0.331 C08 VKG 3 VKG C09 C4 C 0 1 Y N N -20.340 45.335 9.901 -5.835 -1.695 0.275 C09 VKG 4 VKG C10 C5 C 0 1 Y N N -19.445 44.347 9.490 -4.500 -2.049 0.306 C10 VKG 5 VKG C11 C6 C 0 1 Y N N -18.267 44.680 8.804 -3.547 -1.220 -0.273 C11 VKG 6 VKG C13 C7 C 0 1 N N N -17.783 43.034 7.300 -1.677 -2.325 -1.234 C13 VKG 7 VKG C16 C8 C 0 1 N N N -17.450 41.355 5.569 0.088 -3.516 -2.389 C16 VKG 8 VKG C17 C9 C 0 1 N N N -16.292 41.720 4.626 -0.511 -4.914 -2.556 C17 VKG 9 VKG C18 C10 C 0 1 N N N -17.726 41.775 4.120 0.928 -4.752 -2.060 C18 VKG 10 VKG C19 C11 C 0 1 N N N -16.132 41.412 7.624 0.474 -2.355 -0.290 C19 VKG 11 VKG C21 C12 C 0 1 N N N -15.786 41.984 8.891 -0.029 -1.544 0.822 C21 VKG 12 VKG C22 C13 C 0 1 N N N -14.734 41.366 9.654 0.788 -1.138 1.872 C22 VKG 13 VKG C24 C14 C 0 1 Y N N -14.400 38.776 9.502 3.055 -0.707 1.225 C24 VKG 14 VKG C25 C15 C 0 1 Y N N -14.238 38.377 10.829 2.645 0.373 0.456 C25 VKG 15 VKG C26 C16 C 0 1 Y N N -14.553 37.091 11.236 3.582 1.150 -0.198 C26 VKG 16 VKG C27 C17 C 0 1 Y N N -15.028 36.171 10.317 4.928 0.853 -0.088 C27 VKG 17 VKG C29 C18 C 0 1 Y N N -15.193 36.544 8.984 5.342 -0.223 0.678 C29 VKG 18 VKG C30 C19 C 0 1 Y N N -14.878 37.845 8.574 4.410 -1.004 1.335 C30 VKG 19 VKG C33 C20 C 0 1 N N N -13.319 41.325 11.670 1.132 0.040 3.982 C33 VKG 20 VKG C34 C21 C 0 1 N N N -15.024 42.987 11.338 -1.029 -0.019 2.882 C34 VKG 21 VKG C36 C22 C 0 1 N N N -16.063 43.628 10.636 -1.890 -0.403 1.848 C36 VKG 22 VKG C37 C23 C 0 1 N N N -16.644 44.857 11.370 -3.337 0.016 1.867 C37 VKG 23 VKG C38 C24 C 0 1 N N N -16.476 43.097 9.326 -1.398 -1.167 0.811 C38 VKG 24 VKG C39 C25 C 0 1 Y N N -17.964 46.022 8.517 -3.936 -0.037 -0.882 C39 VKG 25 VKG F31 F1 F 0 1 N N N -15.049 38.192 7.263 4.814 -2.055 2.082 F31 VKG 26 VKG I28 I1 I 0 1 N N N -15.484 34.225 10.992 6.343 2.034 -1.083 I28 VKG 27 VKG N02 N1 N 0 1 N N N -21.137 48.730 7.400 -6.059 3.063 0.600 N02 VKG 28 VKG N06 N2 N 0 1 N N N -18.641 48.434 8.683 -5.675 1.505 -1.529 N06 VKG 29 VKG N12 N3 N 0 1 N N N -17.484 43.622 8.476 -2.193 -1.580 -0.241 N12 VKG 30 VKG N15 N4 N 0 1 N N N -17.110 41.945 6.881 -0.390 -2.705 -1.267 N15 VKG 31 VKG N23 N5 N 0 1 N N N -14.042 40.168 9.106 2.108 -1.493 1.893 N23 VKG 32 VKG N32 N6 N 0 1 N N N -14.396 41.900 10.846 0.265 -0.384 2.880 N32 VKG 33 VKG O04 O1 O 0 1 N N N -20.690 49.674 9.814 -7.849 1.670 -0.372 O04 VKG 34 VKG O05 O2 O 0 1 N N N -19.654 50.798 8.144 -6.937 3.623 -1.638 O05 VKG 35 VKG O14 O3 O 0 1 N N N -18.646 43.492 6.621 -2.409 -2.674 -2.140 O14 VKG 36 VKG O20 O4 O 0 1 N N N -15.539 40.453 7.252 1.639 -2.705 -0.331 O20 VKG 37 VKG O35 O5 O 0 1 N N N -14.691 43.421 12.399 -1.459 0.660 3.800 O35 VKG 38 VKG S03 S1 S 0 1 N N N -20.035 49.436 8.522 -6.771 2.498 -0.785 S03 VKG 39 VKG H1 H1 H 0 1 N N N -21.493 47.648 5.626 -4.556 4.200 1.522 H1 VKG 40 VKG H2 H2 H 0 1 N N N -20.048 48.716 5.595 -4.077 3.404 0.003 H2 VKG 41 VKG H3 H3 H 0 1 N N N -20.010 47.179 6.525 -5.135 4.835 -0.037 H3 VKG 42 VKG H4 H4 H 0 1 N N N -20.731 47.444 9.927 -7.271 -0.243 -0.353 H4 VKG 43 VKG H5 H5 H 0 1 N N N -21.245 45.072 10.428 -6.574 -2.340 0.726 H5 VKG 44 VKG H6 H6 H 0 1 N N N -19.662 43.311 9.703 -4.197 -2.970 0.781 H6 VKG 45 VKG H7 H7 H 0 1 N N N -17.521 40.260 5.652 0.338 -2.965 -3.296 H7 VKG 46 VKG H8 H8 H 0 1 N N N -15.611 40.936 4.263 -1.261 -5.230 -1.831 H8 VKG 47 VKG H9 H9 H 0 1 N N N -15.728 42.652 4.783 -0.655 -5.282 -3.572 H9 VKG 48 VKG H10 H10 H 0 1 N N N -18.197 42.747 3.910 1.730 -5.014 -2.750 H10 VKG 49 VKG H11 H11 H 0 1 N N N -18.080 41.031 3.391 1.125 -4.961 -1.008 H11 VKG 50 VKG H12 H12 H 0 1 N N N -13.860 39.084 11.553 1.594 0.605 0.369 H12 VKG 51 VKG H13 H13 H 0 1 N N N -14.428 36.806 12.270 3.262 1.990 -0.796 H13 VKG 52 VKG H14 H14 H 0 1 N N N -15.565 35.828 8.266 6.394 -0.453 0.762 H14 VKG 53 VKG H15 H15 H 0 1 N N N -13.211 41.911 12.594 1.516 1.040 3.779 H15 VKG 54 VKG H16 H16 H 0 1 N N N -13.568 40.284 11.923 0.560 0.052 4.910 H16 VKG 55 VKG H17 H17 H 0 1 N N N -12.374 41.350 11.107 1.965 -0.656 4.078 H17 VKG 56 VKG H18 H18 H 0 1 N N N -16.122 44.993 12.328 -3.554 0.531 2.803 H18 VKG 57 VKG H19 H19 H 0 1 N N N -16.508 45.754 10.748 -3.532 0.687 1.030 H19 VKG 58 VKG H20 H20 H 0 1 N N N -17.717 44.699 11.556 -3.972 -0.865 1.782 H20 VKG 59 VKG H21 H21 H 0 1 N N N -17.061 46.287 7.987 -3.197 0.608 -1.333 H21 VKG 60 VKG H22 H22 H 0 1 N N N -21.723 49.470 7.070 -6.421 2.819 1.466 H22 VKG 61 VKG H23 H23 H 0 1 N N N -18.118 48.506 7.834 -5.309 1.747 -2.394 H23 VKG 62 VKG H24 H24 H 0 1 N N N -13.305 40.302 8.444 2.389 -2.289 2.372 H24 VKG 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VKG C18 C17 SING N N 1 VKG C18 C16 SING N N 2 VKG C17 C16 SING N N 3 VKG C16 N15 SING N N 4 VKG C01 N02 SING N N 5 VKG O14 C13 DOUB N N 6 VKG N15 C13 SING N N 7 VKG N15 C19 SING N N 8 VKG O20 C19 DOUB N N 9 VKG F31 C30 SING N N 10 VKG C13 N12 SING N N 11 VKG N02 S03 SING N N 12 VKG C19 C21 SING N N 13 VKG O05 S03 DOUB N N 14 VKG N12 C11 SING N N 15 VKG N12 C38 SING N N 16 VKG C39 C11 DOUB Y N 17 VKG C39 C07 SING Y N 18 VKG S03 N06 SING N N 19 VKG S03 O04 DOUB N N 20 VKG C30 C29 DOUB Y N 21 VKG C30 C24 SING Y N 22 VKG N06 C07 SING N N 23 VKG C11 C10 SING Y N 24 VKG C21 C38 SING N N 25 VKG C21 C22 DOUB N N 26 VKG C07 C08 DOUB Y N 27 VKG C29 C27 SING Y N 28 VKG N23 C24 SING N N 29 VKG N23 C22 SING N N 30 VKG C38 C36 DOUB N N 31 VKG C10 C09 DOUB Y N 32 VKG C24 C25 DOUB Y N 33 VKG C08 C09 SING Y N 34 VKG C22 N32 SING N N 35 VKG C27 I28 SING N N 36 VKG C27 C26 DOUB Y N 37 VKG C36 C34 SING N N 38 VKG C36 C37 SING N N 39 VKG C25 C26 SING Y N 40 VKG N32 C34 SING N N 41 VKG N32 C33 SING N N 42 VKG C34 O35 DOUB N N 43 VKG C01 H1 SING N N 44 VKG C01 H2 SING N N 45 VKG C01 H3 SING N N 46 VKG C08 H4 SING N N 47 VKG C09 H5 SING N N 48 VKG C10 H6 SING N N 49 VKG C16 H7 SING N N 50 VKG C17 H8 SING N N 51 VKG C17 H9 SING N N 52 VKG C18 H10 SING N N 53 VKG C18 H11 SING N N 54 VKG C25 H12 SING N N 55 VKG C26 H13 SING N N 56 VKG C29 H14 SING N N 57 VKG C33 H15 SING N N 58 VKG C33 H16 SING N N 59 VKG C33 H17 SING N N 60 VKG C37 H18 SING N N 61 VKG C37 H19 SING N N 62 VKG C37 H20 SING N N 63 VKG C39 H21 SING N N 64 VKG N02 H22 SING N N 65 VKG N06 H23 SING N N 66 VKG N23 H24 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VKG SMILES ACDLabs 12.01 "CNS(Nc1cccc(c1)N5C(N(C2CC2)C(C=3C5=C(C(=O)N(C=3Nc4ccc(I)cc4F)C)C)=O)=O)(=O)=O" VKG InChI InChI 1.03 "InChI=1S/C25H24FIN6O5S/c1-13-21-20(22(31(3)23(13)34)29-19-10-7-14(27)11-18(19)26)24(35)33(16-8-9-16)25(36)32(21)17-6-4-5-15(12-17)30-39(37,38)28-2/h4-7,10-12,16,28-30H,8-9H2,1-3H3" VKG InChIKey InChI 1.03 DNNMBAWCLGMMRJ-UHFFFAOYSA-N VKG SMILES_CANONICAL CACTVS 3.385 "CN[S](=O)(=O)Nc1cccc(c1)N2C(=O)N(C3CC3)C(=O)C4=C(Nc5ccc(I)cc5F)N(C)C(=O)C(=C24)C" VKG SMILES CACTVS 3.385 "CN[S](=O)(=O)Nc1cccc(c1)N2C(=O)N(C3CC3)C(=O)C4=C(Nc5ccc(I)cc5F)N(C)C(=O)C(=C24)C" VKG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C2C(=C(N(C1=O)C)Nc3ccc(cc3F)I)C(=O)N(C(=O)N2c4cccc(c4)NS(=O)(=O)NC)C5CC5" VKG SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C2C(=C(N(C1=O)C)Nc3ccc(cc3F)I)C(=O)N(C(=O)N2c4cccc(c4)NS(=O)(=O)NC)C5CC5" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VKG "SYSTEMATIC NAME" ACDLabs 12.01 "N-(3-{3-cyclopropyl-5-[(2-fluoro-4-iodophenyl)amino]-6,8-dimethyl-2,4,7-trioxo-3,4,6,7-tetrahydropyrido[4,3-d]pyrimidin-1(2H)-yl}phenyl)-N'-methylsulfuric diamide" VKG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-cyclopropyl-5-[(2-fluoranyl-4-iodanyl-phenyl)amino]-6,8-dimethyl-1-[3-(methylsulfamoylamino)phenyl]pyrido[4,3-d]pyrimidine-2,4,7-trione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VKG "Create component" 2020-08-21 RCSB VKG "Initial release" 2020-09-30 RCSB ##