data_VKQ # _chem_comp.id VKQ _chem_comp.name "5-[4-[(3-ethyl-2-oxidanylidene-1~{H}-quinolin-7-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H27 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-26 _chem_comp.pdbx_modified_date 2021-09-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.493 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VKQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ONT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VKQ C1 C1 C 0 1 N N N 23.873 28.532 38.063 -7.669 2.200 0.621 C1 VKQ 1 VKQ C2 C2 C 0 1 N N N 25.142 27.905 37.539 -6.521 1.302 0.241 C2 VKQ 2 VKQ C3 C3 C 0 1 N N N 25.561 28.064 36.252 -5.859 0.609 1.200 C3 VKQ 3 VKQ C7 C4 C 0 1 Y N N 29.159 26.229 34.962 -2.652 -1.871 -0.010 C7 VKQ 4 VKQ C8 C5 C 0 1 Y N N 28.702 26.075 36.271 -3.352 -1.156 -0.958 C8 VKQ 5 VKQ C9 C6 C 0 1 Y N N 27.517 26.696 36.674 -4.406 -0.337 -0.566 C9 VKQ 6 VKQ C10 C7 C 0 1 N N N 25.921 27.100 38.477 -6.142 1.181 -1.113 C10 VKQ 7 VKQ C11 C8 C 0 1 N N N 30.437 25.560 34.498 -1.510 -2.756 -0.438 C11 VKQ 8 VKQ C12 C9 C 0 1 N N N 31.766 27.549 34.049 0.830 -2.738 -1.058 C12 VKQ 9 VKQ C13 C10 C 0 1 N N N 33.046 28.286 34.397 2.091 -1.871 -1.097 C13 VKQ 10 VKQ C14 C11 C 0 1 N N N 34.170 26.121 34.680 1.361 -0.721 0.905 C14 VKQ 11 VKQ C15 C12 C 0 1 N N N 32.846 25.424 34.380 0.101 -1.589 0.943 C15 VKQ 12 VKQ C16 C13 C 0 1 Y N N 35.428 28.080 33.811 3.635 -0.744 0.283 C16 VKQ 13 VKQ C19 C14 C 0 1 Y N N 37.770 29.383 33.252 5.958 0.682 0.220 C19 VKQ 14 VKQ C20 C15 C 0 1 Y N N 35.473 29.294 33.139 4.309 -0.472 -0.908 C20 VKQ 15 VKQ C21 C16 C 0 1 N N N 39.041 30.123 32.926 7.218 1.454 0.170 C21 VKQ 16 VKQ C22 C17 C 0 1 N N N 40.011 32.152 31.978 9.071 2.443 -1.064 C22 VKQ 17 VKQ O1 O1 O 0 1 N N N 40.141 29.670 33.238 7.707 1.885 1.195 O1 VKQ 18 VKQ N4 N1 N 0 1 N N N 38.887 31.278 32.281 7.823 1.679 -1.013 N4 VKQ 19 VKQ C18 C18 C 0 1 Y N N 37.831 28.169 33.928 5.338 0.453 1.449 C18 VKQ 20 VKQ C17 C19 C 0 1 Y N N 36.644 27.515 34.208 4.159 -0.269 1.485 C17 VKQ 21 VKQ N3 N2 N 0 1 Y N N 36.611 29.943 32.858 5.426 0.218 -0.905 N3 VKQ 22 VKQ N2 N3 N 0 1 N N N 34.212 27.455 34.066 2.452 -1.475 0.272 N2 VKQ 23 VKQ N1 N4 N 0 1 N N N 31.698 26.265 34.775 -0.261 -1.984 -0.425 N1 VKQ 24 VKQ C6 C20 C 0 1 Y N N 28.404 26.990 34.065 -2.996 -1.792 1.333 C6 VKQ 25 VKQ C5 C21 C 0 1 Y N N 27.231 27.605 34.464 -4.027 -0.995 1.741 C5 VKQ 26 VKQ C4 C22 C 0 1 Y N N 26.761 27.467 35.772 -4.748 -0.255 0.797 C4 VKQ 27 VKQ N N5 N 0 1 N N N 27.058 26.548 37.978 -5.123 0.389 -1.493 N VKQ 28 VKQ O O2 O 0 1 N N N 25.613 26.906 39.653 -6.753 1.809 -1.960 O VKQ 29 VKQ C C23 C 0 1 N N N 23.045 29.310 37.019 -7.162 3.635 0.786 C VKQ 30 VKQ H1 H1 H 0 1 N N N 24.146 29.229 38.869 -8.428 2.171 -0.161 H1 VKQ 31 VKQ H2 H2 H 0 1 N N N 23.240 27.730 38.470 -8.102 1.858 1.561 H2 VKQ 32 VKQ H3 H3 H 0 1 N N N 24.965 28.660 35.577 -6.144 0.693 2.238 H3 VKQ 33 VKQ H4 H4 H 0 1 N N N 29.264 25.476 36.973 -3.077 -1.224 -2.000 H4 VKQ 34 VKQ H5 H5 H 0 1 N N N 30.364 25.425 33.409 -1.425 -3.597 0.252 H5 VKQ 35 VKQ H6 H6 H 0 1 N N N 30.493 24.576 34.986 -1.697 -3.130 -1.444 H6 VKQ 36 VKQ H7 H7 H 0 1 N N N 30.902 28.170 34.329 0.544 -3.009 -2.074 H7 VKQ 37 VKQ H8 H8 H 0 1 N N N 31.742 27.355 32.966 1.029 -3.642 -0.483 H8 VKQ 38 VKQ H9 H9 H 0 1 N N N 33.093 29.224 33.824 2.909 -2.438 -1.539 H9 VKQ 39 VKQ H10 H10 H 0 1 N N N 33.054 28.513 35.473 1.901 -0.980 -1.695 H10 VKQ 40 VKQ H11 H11 H 0 1 N N N 34.995 25.514 34.279 1.163 0.183 0.329 H11 VKQ 41 VKQ H12 H12 H 0 1 N N N 34.285 26.222 35.769 1.647 -0.450 1.921 H12 VKQ 42 VKQ H13 H13 H 0 1 N N N 32.785 25.218 33.301 0.291 -2.480 1.541 H13 VKQ 43 VKQ H14 H14 H 0 1 N N N 32.805 24.476 34.937 -0.718 -1.021 1.386 H14 VKQ 44 VKQ H15 H15 H 0 1 N N N 34.540 29.739 32.826 3.907 -0.834 -1.843 H15 VKQ 45 VKQ H16 H16 H 0 1 N N N 39.650 33.043 31.444 9.832 1.936 -0.471 H16 VKQ 46 VKQ H17 H17 H 0 1 N N N 40.500 32.459 32.915 9.408 2.521 -2.097 H17 VKQ 47 VKQ H18 H18 H 0 1 N N N 40.734 31.614 31.346 8.902 3.442 -0.660 H18 VKQ 48 VKQ H19 H19 H 0 1 N N N 37.969 31.554 31.995 7.432 1.334 -1.832 H19 VKQ 49 VKQ H20 H20 H 0 1 N N N 38.780 27.748 34.227 5.772 0.836 2.360 H20 VKQ 50 VKQ H21 H21 H 0 1 N N N 36.657 26.571 34.732 3.657 -0.461 2.421 H21 VKQ 51 VKQ H23 H23 H 0 1 N N N 28.742 27.099 33.045 -2.439 -2.362 2.062 H23 VKQ 52 VKQ H24 H24 H 0 1 N N N 26.672 28.199 33.756 -4.285 -0.936 2.788 H24 VKQ 53 VKQ H25 H25 H 0 1 N N N 27.609 25.990 38.599 -4.886 0.332 -2.432 H25 VKQ 54 VKQ H26 H26 H 0 1 N N N 22.146 29.725 37.498 -6.403 3.664 1.568 H26 VKQ 55 VKQ H27 H27 H 0 1 N N N 23.652 30.129 36.606 -6.729 3.977 -0.154 H27 VKQ 56 VKQ H28 H28 H 0 1 N N N 22.747 28.630 36.207 -7.993 4.284 1.061 H28 VKQ 57 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VKQ C22 N4 SING N N 1 VKQ N4 C21 SING N N 2 VKQ N3 C20 DOUB Y N 3 VKQ N3 C19 SING Y N 4 VKQ C21 O1 DOUB N N 5 VKQ C21 C19 SING N N 6 VKQ C20 C16 SING Y N 7 VKQ C19 C18 DOUB Y N 8 VKQ C16 N2 SING N N 9 VKQ C16 C17 DOUB Y N 10 VKQ C18 C17 SING Y N 11 VKQ C12 C13 SING N N 12 VKQ C12 N1 SING N N 13 VKQ C6 C5 DOUB Y N 14 VKQ C6 C7 SING Y N 15 VKQ N2 C13 SING N N 16 VKQ N2 C14 SING N N 17 VKQ C15 C14 SING N N 18 VKQ C15 N1 SING N N 19 VKQ C5 C4 SING Y N 20 VKQ C11 N1 SING N N 21 VKQ C11 C7 SING N N 22 VKQ C7 C8 DOUB Y N 23 VKQ C4 C3 SING N N 24 VKQ C4 C9 DOUB Y N 25 VKQ C3 C2 DOUB N N 26 VKQ C8 C9 SING Y N 27 VKQ C9 N SING N N 28 VKQ C C1 SING N N 29 VKQ C2 C1 SING N N 30 VKQ C2 C10 SING N N 31 VKQ N C10 SING N N 32 VKQ C10 O DOUB N N 33 VKQ C1 H1 SING N N 34 VKQ C1 H2 SING N N 35 VKQ C3 H3 SING N N 36 VKQ C8 H4 SING N N 37 VKQ C11 H5 SING N N 38 VKQ C11 H6 SING N N 39 VKQ C12 H7 SING N N 40 VKQ C12 H8 SING N N 41 VKQ C13 H9 SING N N 42 VKQ C13 H10 SING N N 43 VKQ C14 H11 SING N N 44 VKQ C14 H12 SING N N 45 VKQ C15 H13 SING N N 46 VKQ C15 H14 SING N N 47 VKQ C20 H15 SING N N 48 VKQ C22 H16 SING N N 49 VKQ C22 H17 SING N N 50 VKQ C22 H18 SING N N 51 VKQ N4 H19 SING N N 52 VKQ C18 H20 SING N N 53 VKQ C17 H21 SING N N 54 VKQ C6 H23 SING N N 55 VKQ C5 H24 SING N N 56 VKQ N H25 SING N N 57 VKQ C H26 SING N N 58 VKQ C H27 SING N N 59 VKQ C H28 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VKQ InChI InChI 1.03 "InChI=1S/C23H27N5O2/c1-3-17-13-18-5-4-16(12-21(18)26-22(17)29)15-27-8-10-28(11-9-27)19-6-7-20(25-14-19)23(30)24-2/h4-7,12-14H,3,8-11,15H2,1-2H3,(H,24,30)(H,26,29)" VKQ InChIKey InChI 1.03 CEIZJAXIHJZKRG-UHFFFAOYSA-N VKQ SMILES_CANONICAL CACTVS 3.385 "CCC1=Cc2ccc(CN3CCN(CC3)c4ccc(nc4)C(=O)NC)cc2NC1=O" VKQ SMILES CACTVS 3.385 "CCC1=Cc2ccc(CN3CCN(CC3)c4ccc(nc4)C(=O)NC)cc2NC1=O" VKQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=Cc2ccc(cc2NC1=O)CN3CCN(CC3)c4ccc(nc4)C(=O)NC" VKQ SMILES "OpenEye OEToolkits" 2.0.7 "CCC1=Cc2ccc(cc2NC1=O)CN3CCN(CC3)c4ccc(nc4)C(=O)NC" # _pdbx_chem_comp_identifier.comp_id VKQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[4-[(3-ethyl-2-oxidanylidene-1~{H}-quinolin-7-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VKQ "Create component" 2021-05-26 PDBE VKQ "Initial release" 2021-09-15 RCSB ##