data_VLS # _chem_comp.id VLS _chem_comp.name "N-[1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl]glycine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H13 N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-27 _chem_comp.pdbx_modified_date 2021-01-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 179.171 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VLS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JX9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VLS C10 C1 C 0 1 N N N -27.838 -28.261 -0.246 2.715 0.018 -0.137 C10 VLS 1 VLS C02 C2 C 0 1 N N N -25.494 -25.933 2.280 -1.203 1.224 0.968 C02 VLS 2 VLS C03 C3 C 0 1 N N N -24.815 -27.184 1.675 -1.025 -0.013 0.086 C03 VLS 3 VLS C04 C4 C 0 1 N N N -23.758 -26.765 0.638 -1.184 -1.274 0.938 C04 VLS 4 VLS C06 C5 C 0 1 N N N -24.191 -28.080 2.767 -2.082 -0.008 -1.020 C06 VLS 5 VLS C09 C6 C 0 1 N N N -26.809 -27.297 0.337 1.358 -0.000 0.518 C09 VLS 6 VLS N08 N1 N 0 1 N N N -25.803 -28.047 1.072 0.315 0.004 -0.517 N08 VLS 7 VLS O01 O1 O 0 1 N N N -26.481 -26.359 3.197 -1.054 2.402 0.172 O01 VLS 8 VLS O05 O2 O 0 1 N N N -24.267 -25.790 -0.265 -0.903 -2.426 0.140 O05 VLS 9 VLS O07 O3 O 0 1 N N N -23.005 -27.513 3.243 -3.385 -0.025 -0.434 O07 VLS 10 VLS O11 O4 O 0 1 N N N -27.525 -29.479 -0.391 3.825 0.018 0.618 O11 VLS 11 VLS O12 O5 O 0 1 N N N -28.985 -27.835 -0.577 2.805 0.029 -1.342 O12 VLS 12 VLS H1 H1 H 0 1 N N N -24.744 -25.319 2.800 -2.197 1.211 1.415 H1 VLS 13 VLS H2 H2 H 0 1 N N N -25.962 -25.341 1.480 -0.450 1.220 1.756 H2 VLS 14 VLS H3 H3 H 0 1 N N N -23.447 -27.652 0.067 -0.490 -1.235 1.778 H3 VLS 15 VLS H4 H4 H 0 1 N N N -22.889 -26.344 1.165 -2.206 -1.332 1.313 H4 VLS 16 VLS H5 H5 H 0 1 N N N -24.902 -28.185 3.600 -1.968 0.890 -1.627 H5 VLS 17 VLS H6 H6 H 0 1 N N N -23.974 -29.071 2.342 -1.954 -0.889 -1.649 H6 VLS 18 VLS H7 H7 H 0 1 N N N -26.327 -26.739 -0.479 1.261 -0.898 1.128 H7 VLS 19 VLS H8 H8 H 0 1 N N N -27.311 -26.593 1.017 1.247 0.882 1.149 H8 VLS 20 VLS H9 H9 H 0 1 N N N -26.255 -28.572 1.793 0.423 0.794 -1.135 H9 VLS 21 VLS H11 H11 H 0 1 N N N -26.908 -25.601 3.578 -1.155 3.226 0.667 H11 VLS 22 VLS H12 H12 H 0 1 N N N -23.592 -25.554 -0.890 -0.984 -3.264 0.617 H12 VLS 23 VLS H13 H13 H 0 1 N N N -22.632 -28.074 3.913 -4.106 -0.023 -1.078 H13 VLS 24 VLS H14 H14 H 0 1 N N N -28.260 -29.953 -0.763 4.673 0.030 0.153 H14 VLS 25 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VLS O12 C10 DOUB N N 1 VLS O11 C10 SING N N 2 VLS O05 C04 SING N N 3 VLS C10 C09 SING N N 4 VLS C09 N08 SING N N 5 VLS C04 C03 SING N N 6 VLS N08 C03 SING N N 7 VLS C03 C02 SING N N 8 VLS C03 C06 SING N N 9 VLS C02 O01 SING N N 10 VLS C06 O07 SING N N 11 VLS C02 H1 SING N N 12 VLS C02 H2 SING N N 13 VLS C04 H3 SING N N 14 VLS C04 H4 SING N N 15 VLS C06 H5 SING N N 16 VLS C06 H6 SING N N 17 VLS C09 H7 SING N N 18 VLS C09 H8 SING N N 19 VLS N08 H9 SING N N 20 VLS O01 H11 SING N N 21 VLS O05 H12 SING N N 22 VLS O07 H13 SING N N 23 VLS O11 H14 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VLS SMILES ACDLabs 12.01 "C(CNC(CO)(CO)CO)(O)=O" VLS InChI InChI 1.03 "InChI=1S/C6H13NO5/c8-2-6(3-9,4-10)7-1-5(11)12/h7-10H,1-4H2,(H,11,12)" VLS InChIKey InChI 1.03 SEQKRHFRPICQDD-UHFFFAOYSA-N VLS SMILES_CANONICAL CACTVS 3.385 "OCC(CO)(CO)NCC(O)=O" VLS SMILES CACTVS 3.385 "OCC(CO)(CO)NCC(O)=O" VLS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(C(=O)O)NC(CO)(CO)CO" VLS SMILES "OpenEye OEToolkits" 2.0.7 "C(C(=O)O)NC(CO)(CO)CO" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VLS "SYSTEMATIC NAME" ACDLabs 12.01 "N-[1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl]glycine" VLS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[2-(hydroxymethyl)-1,3-bis(oxidanyl)propan-2-yl]amino]ethanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VLS "Create component" 2020-08-27 RCSB VLS "Initial release" 2021-01-06 RCSB ##