data_VLX # _chem_comp.id VLX _chem_comp.name "(2S)-2-[(4R)-2-oxidanylidene-4-propyl-pyrrolidin-1-yl]butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H20 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-28 _chem_comp.pdbx_modified_date 2024-04-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 212.289 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VLX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8K77 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VLX C10 C1 C 0 1 N N N N N N 124.036 117.584 107.802 -5.603 0.214 -0.196 C10 VLX 1 VLX C7 C2 C 0 1 N N N N N N 122.880 118.356 107.173 -4.274 -0.533 -0.066 C7 VLX 2 VLX C5 C3 C 0 1 N N S N N N 120.354 123.205 107.047 1.900 0.451 -0.569 C5 VLX 3 VLX C4 C4 C 0 1 N N N N N N 121.793 118.598 108.215 -3.138 0.358 -0.572 C4 VLX 4 VLX C3 C5 C 0 1 N N N N N N 120.614 120.298 109.530 -1.371 -0.489 1.038 C3 VLX 5 VLX C2 C6 C 0 1 N N N N N N 121.758 121.012 107.483 -0.652 0.430 -1.058 C2 VLX 6 VLX C1 C7 C 0 1 N N R N N N 121.808 120.073 108.687 -1.809 -0.389 -0.442 C1 VLX 7 VLX C6 C8 C 0 1 N N N N N N 119.981 121.572 109.055 0.133 -0.333 0.995 C6 VLX 8 VLX C11 C9 C 0 1 N N N N N N 121.608 125.114 106.059 1.781 2.800 0.273 C11 VLX 9 VLX C8 C10 C 0 1 N N N N N N 121.524 123.591 106.147 2.507 1.460 0.408 C8 VLX 10 VLX C9 C11 C 0 1 N N N N N N 119.133 122.923 106.186 2.692 -0.830 -0.525 C9 VLX 11 VLX N1 N1 N 0 1 N N N N N N 120.680 122.012 107.803 0.511 0.179 -0.190 N1 VLX 12 VLX N2 N2 N 0 1 N N N N N N 117.864 123.552 106.489 4.003 -0.822 -0.838 N2 VLX 13 VLX O1 O1 O 0 1 N N N N N N 119.084 122.137 109.577 0.887 -0.625 1.898 O1 VLX 14 VLX O2 O2 O 0 1 N N N N N N 119.225 122.183 105.271 2.151 -1.868 -0.208 O2 VLX 15 VLX H1 H1 H 0 1 N N N N N N 124.817 117.412 107.047 -6.413 -0.421 0.165 H1 VLX 16 VLX H2 H2 H 0 1 N N N N N N 124.455 118.166 108.636 -5.566 1.127 0.398 H2 VLX 17 VLX H3 H3 H 0 1 N N N N N N 123.670 116.617 108.177 -5.778 0.467 -1.241 H3 VLX 18 VLX H4 H4 H 0 1 N N N N N N 123.248 119.322 106.798 -4.100 -0.786 0.980 H4 VLX 19 VLX H5 H5 H 0 1 N N N N N N 122.463 117.773 106.339 -4.312 -1.446 -0.660 H5 VLX 20 VLX H6 H6 H 0 1 N N N N N N 120.132 124.039 107.729 1.927 0.860 -1.578 H6 VLX 21 VLX H7 H7 H 0 1 N N N N N N 120.812 118.370 107.773 -3.312 0.611 -1.617 H7 VLX 22 VLX H8 H8 H 0 1 N N N N N N 121.968 117.940 109.079 -3.100 1.271 0.022 H8 VLX 23 VLX H9 H9 H 0 1 N N N N N N 119.909 119.461 109.419 -1.822 0.313 1.623 H9 VLX 24 VLX H10 H10 H 0 1 N N N N N N 120.908 120.392 110.586 -1.643 -1.460 1.451 H10 VLX 25 VLX H11 H11 H 0 1 N N N N N N 121.506 120.454 106.569 -0.446 0.088 -2.072 H11 VLX 26 VLX H12 H12 H 0 1 N N N N N N 122.725 121.518 107.349 -0.900 1.491 -1.059 H12 VLX 27 VLX H13 H13 H 0 1 N N N N N N 122.725 120.262 109.265 -1.873 -1.378 -0.897 H13 VLX 28 VLX H14 H14 H 0 1 N N N N N N 122.450 125.398 105.411 1.888 3.171 -0.746 H14 VLX 29 VLX H15 H15 H 0 1 N N N N N N 120.672 125.509 105.638 0.723 2.665 0.501 H15 VLX 30 VLX H16 H16 H 0 1 N N N N N N 121.762 125.531 107.065 2.213 3.519 0.969 H16 VLX 31 VLX H17 H17 H 0 1 N N N N N N 121.369 123.172 105.142 2.399 1.089 1.427 H17 VLX 32 VLX H18 H18 H 0 1 N N N N N N 122.459 123.195 106.569 3.564 1.595 0.180 H18 VLX 33 VLX H19 H19 H 0 1 N N N N N N 117.063 123.360 105.922 4.436 0.007 -1.091 H19 VLX 34 VLX H20 H20 H 0 1 N N N N N N 117.789 124.178 107.265 4.513 -1.647 -0.809 H20 VLX 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VLX O2 C9 DOUB N N 1 VLX C11 C8 SING N N 2 VLX C8 C5 SING N N 3 VLX C9 N2 SING N N 4 VLX C9 C5 SING N N 5 VLX C5 N1 SING N N 6 VLX C7 C10 SING N N 7 VLX C7 C4 SING N N 8 VLX C2 N1 SING N N 9 VLX C2 C1 SING N N 10 VLX N1 C6 SING N N 11 VLX C4 C1 SING N N 12 VLX C1 C3 SING N N 13 VLX C6 C3 SING N N 14 VLX C6 O1 DOUB N N 15 VLX C10 H1 SING N N 16 VLX C10 H2 SING N N 17 VLX C10 H3 SING N N 18 VLX C7 H4 SING N N 19 VLX C7 H5 SING N N 20 VLX C5 H6 SING N N 21 VLX C4 H7 SING N N 22 VLX C4 H8 SING N N 23 VLX C3 H9 SING N N 24 VLX C3 H10 SING N N 25 VLX C2 H11 SING N N 26 VLX C2 H12 SING N N 27 VLX C1 H13 SING N N 28 VLX C11 H14 SING N N 29 VLX C11 H15 SING N N 30 VLX C11 H16 SING N N 31 VLX C8 H17 SING N N 32 VLX C8 H18 SING N N 33 VLX N2 H19 SING N N 34 VLX N2 H20 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VLX InChI InChI 1.06 "InChI=1S/C11H20N2O2/c1-3-5-8-6-10(14)13(7-8)9(4-2)11(12)15/h8-9H,3-7H2,1-2H3,(H2,12,15)/t8-,9+/m1/s1" VLX InChIKey InChI 1.06 MSYKRHVOOPPJKU-BDAKNGLRSA-N VLX SMILES_CANONICAL CACTVS 3.385 "CCC[C@H]1CN([C@@H](CC)C(N)=O)C(=O)C1" VLX SMILES CACTVS 3.385 "CCC[CH]1CN([CH](CC)C(N)=O)C(=O)C1" VLX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC[C@@H]1CC(=O)N(C1)[C@@H](CC)C(=O)N" VLX SMILES "OpenEye OEToolkits" 2.0.7 "CCCC1CC(=O)N(C1)C(CC)C(=O)N" # _pdbx_chem_comp_identifier.comp_id VLX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[(4~{R})-2-oxidanylidene-4-propyl-pyrrolidin-1-yl]butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VLX "Create component" 2023-07-28 PDBJ VLX "Initial release" 2024-05-01 RCSB #