data_VM0 # _chem_comp.id VM0 _chem_comp.name "(1S,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H36 Cl N3 O8 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-30 _chem_comp.pdbx_modified_date 2022-09-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 594.141 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VM0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8E61 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VM0 C31 C1 C 0 1 Y N N -22.059 0.001 -4.282 9.533 0.542 -1.948 C31 VM0 1 VM0 C32 C2 C 0 1 Y N N -21.448 0.189 -3.046 9.262 0.805 -0.616 C32 VM0 2 VM0 C34 C3 C 0 1 Y N N -22.189 0.061 -1.885 8.226 0.150 0.022 C34 VM0 3 VM0 N10 N1 N 0 1 N N N -18.765 -5.275 4.802 -3.647 0.010 0.657 N10 VM0 4 VM0 N15 N2 N 0 1 N N N -14.971 -1.917 2.540 -6.877 -3.589 -1.379 N15 VM0 5 VM0 C11 C4 C 0 1 N N S -17.341 -5.478 4.850 -4.758 0.494 -0.167 C11 VM0 6 VM0 C13 C5 C 0 1 N N S -16.523 -3.448 3.540 -5.557 -1.844 -0.536 C13 VM0 7 VM0 C14 C6 C 0 1 N N N -15.984 -2.102 3.650 -6.673 -2.834 -0.286 C14 VM0 8 VM0 C12 C7 C 0 1 N N N -16.640 -4.115 4.936 -5.949 -0.456 -0.027 C12 VM0 9 VM0 S2 S1 S 0 1 N Y N -17.783 -5.560 7.554 -6.419 2.563 -0.829 S2 VM0 10 VM0 C16 C8 C 0 1 N N N -14.906 -3.133 1.772 -5.948 -3.226 -2.457 C16 VM0 11 VM0 C17 C9 C 0 1 N N N -15.505 -4.209 2.696 -5.392 -1.838 -2.072 C17 VM0 12 VM0 C19 C10 C 0 1 N N S -17.064 -6.351 6.085 -5.164 1.894 0.296 C19 VM0 13 VM0 C24 C11 C 0 1 N N N -24.174 -2.087 0.295 4.695 -0.586 -0.265 C24 VM0 14 VM0 C23 C12 C 0 1 N N N -22.706 -2.151 0.743 3.469 -1.115 0.481 C23 VM0 15 VM0 C28 C13 C 0 1 Y N N -23.534 -0.261 -1.953 7.457 -0.774 -0.676 C28 VM0 16 VM0 C29 C14 C 0 1 Y N N -24.147 -0.450 -3.187 7.733 -1.036 -2.012 C29 VM0 17 VM0 C30 C15 C 0 1 Y N N -23.407 -0.318 -4.351 8.767 -0.373 -2.645 C30 VM0 18 VM0 C25 C16 C 0 1 N N N -25.084 -2.305 1.506 4.435 -0.634 -1.772 C25 VM0 19 VM0 C26 C17 C 0 1 N N N -24.488 -3.161 -0.744 4.966 0.859 0.159 C26 VM0 20 VM0 O18 O1 O 0 1 N N N -16.266 -1.299 4.479 -7.295 -2.933 0.751 O18 VM0 21 VM0 C02 C18 C 0 1 N N N -21.432 -3.812 1.831 1.147 -0.626 0.742 C02 VM0 22 VM0 C04 C19 C 0 1 N N S -21.028 -5.419 3.671 -1.233 -0.268 1.119 C04 VM0 23 VM0 C05 C20 C 0 1 N N N -21.712 -6.667 4.223 -1.314 0.369 2.508 C05 VM0 24 VM0 C06 C21 C 0 1 N N N -23.237 -6.592 4.173 -0.230 -0.230 3.407 C06 VM0 25 VM0 C07 C22 C 0 1 N N N -23.893 -7.619 5.094 -0.229 0.493 4.755 C07 VM0 26 VM0 C08 C23 C 0 1 N N N -23.765 -5.192 4.491 -0.514 -1.717 3.626 C08 VM0 27 VM0 C09 C24 C 0 1 N N N -19.527 -5.643 3.627 -2.375 0.231 0.271 C09 VM0 28 VM0 N03 N3 N 0 1 N N N -21.512 -5.156 2.336 0.038 0.096 0.488 N03 VM0 29 VM0 O01 O2 O 0 1 N N N -20.711 -3.034 2.373 1.093 -1.579 1.494 O01 VM0 30 VM0 O20 O3 O 0 1 N N N -15.676 -6.497 6.216 -4.018 2.748 0.294 O20 VM0 31 VM0 O21 O4 O 0 1 N N N -18.998 -6.107 2.675 -2.149 0.830 -0.759 O21 VM0 32 VM0 O22 O5 O 0 1 N N N -22.210 -3.460 0.722 2.316 -0.292 0.162 O22 VM0 33 VM0 S27 S2 S 0 1 N N N -24.501 -0.434 -0.427 6.136 -1.613 0.133 S27 VM0 34 VM0 CL33 CL1 CL 0 0 N N N -19.714 0.602 -2.938 10.223 1.960 0.253 CL33 VM0 35 VM0 H1 H1 H 0 1 N N N -21.482 0.104 -5.189 10.344 1.055 -2.444 H1 VM0 36 VM0 H2 H2 H 0 1 N N N -21.718 0.212 -0.925 8.014 0.355 1.061 H2 VM0 37 VM0 H3 H3 H 0 1 N N N -19.234 -4.875 5.590 -3.828 -0.470 1.480 H3 VM0 38 VM0 H4 H4 H 0 1 N N N -14.437 -1.089 2.369 -7.548 -4.286 -1.447 H4 VM0 39 VM0 H5 H5 H 0 1 N N N -16.996 -6.006 3.949 -4.445 0.533 -1.211 H5 VM0 40 VM0 H6 H6 H 0 1 N N N -17.504 -3.446 3.043 -4.636 -2.179 -0.059 H6 VM0 41 VM0 H7 H7 H 0 1 N N N -15.631 -4.257 5.350 -6.239 -0.522 1.022 H7 VM0 42 VM0 H8 H8 H 0 1 N N N -17.219 -3.456 5.600 -6.787 -0.076 -0.612 H8 VM0 43 VM0 H10 H10 H 0 1 N N N -15.497 -3.041 0.849 -5.138 -3.954 -2.517 H10 VM0 44 VM0 H11 H11 H 0 1 N N N -13.864 -3.376 1.517 -6.477 -3.170 -3.408 H11 VM0 45 VM0 H12 H12 H 0 1 N N N -15.997 -4.999 2.109 -5.985 -1.041 -2.521 H12 VM0 46 VM0 H13 H13 H 0 1 N N N -14.726 -4.656 3.332 -4.343 -1.746 -2.353 H13 VM0 47 VM0 H14 H14 H 0 1 N N N -17.567 -7.323 5.973 -5.573 1.839 1.305 H14 VM0 48 VM0 H15 H15 H 0 1 N N N -22.100 -1.530 0.066 3.276 -2.144 0.179 H15 VM0 49 VM0 H16 H16 H 0 1 N N N -22.630 -1.758 1.768 3.654 -1.080 1.555 H16 VM0 50 VM0 H17 H17 H 0 1 N N N -25.197 -0.699 -3.238 7.138 -1.754 -2.557 H17 VM0 51 VM0 H18 H18 H 0 1 N N N -23.879 -0.463 -5.311 8.981 -0.576 -3.684 H18 VM0 52 VM0 H19 H19 H 0 1 N N N -24.872 -1.539 2.267 3.618 0.043 -2.022 H19 VM0 53 VM0 H20 H20 H 0 1 N N N -26.136 -2.229 1.193 5.335 -0.330 -2.306 H20 VM0 54 VM0 H21 H21 H 0 1 N N N -24.898 -3.303 1.929 4.167 -1.650 -2.062 H21 VM0 55 VM0 H22 H22 H 0 1 N N N -24.293 -4.155 -0.315 5.241 0.882 1.214 H22 VM0 56 VM0 H23 H23 H 0 1 N N N -25.546 -3.089 -1.037 5.782 1.266 -0.438 H23 VM0 57 VM0 H24 H24 H 0 1 N N N -23.851 -3.012 -1.629 4.068 1.458 0.004 H24 VM0 58 VM0 H25 H25 H 0 1 N N N -21.248 -4.566 4.330 -1.296 -1.352 1.212 H25 VM0 59 VM0 H26 H26 H 0 1 N N N -21.385 -7.535 3.631 -1.163 1.445 2.424 H26 VM0 60 VM0 H27 H27 H 0 1 N N N -21.403 -6.800 5.270 -2.295 0.173 2.941 H27 VM0 61 VM0 H28 H28 H 0 1 N N N -23.543 -6.831 3.144 0.743 -0.112 2.931 H28 VM0 62 VM0 H29 H29 H 0 1 N N N -24.987 -7.528 5.025 -1.202 0.375 5.231 H29 VM0 63 VM0 H30 H30 H 0 1 N N N -23.589 -8.631 4.789 0.543 0.067 5.396 H30 VM0 64 VM0 H31 H31 H 0 1 N N N -23.575 -7.437 6.131 -0.027 1.553 4.599 H31 VM0 65 VM0 H32 H32 H 0 1 N N N -24.864 -5.194 4.441 -1.487 -1.835 4.102 H32 VM0 66 VM0 H33 H33 H 0 1 N N N -23.444 -4.900 5.502 -0.514 -2.232 2.665 H33 VM0 67 VM0 H34 H34 H 0 1 N N N -23.366 -4.475 3.759 0.258 -2.144 4.266 H34 VM0 68 VM0 H35 H35 H 0 1 N N N -21.894 -5.891 1.776 0.082 0.857 -0.112 H35 VM0 69 VM0 H36 H36 H 0 1 N N N -15.484 -7.035 6.975 -3.305 2.451 0.875 H36 VM0 70 VM0 O1 O6 O 0 1 N Y N -17.108 -6.550 8.905 -6.058 2.317 -2.182 O1 VM0 71 VM0 O2 O7 O 0 1 N Y N ? ? ? -7.641 1.685 -0.601 O2 VM0 72 VM0 O3 O8 O 0 1 N Y N ? ? ? -6.832 3.855 -0.405 O3 VM0 73 VM0 H9 H9 H 0 1 N Y N ? ? ? -8.405 1.926 -1.142 H9 VM0 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VM0 C30 C31 DOUB Y N 1 VM0 C30 C29 SING Y N 2 VM0 C31 C32 SING Y N 3 VM0 C29 C28 DOUB Y N 4 VM0 C32 CL33 SING N N 5 VM0 C32 C34 DOUB Y N 6 VM0 C28 C34 SING Y N 7 VM0 C28 S27 SING N N 8 VM0 C26 C24 SING N N 9 VM0 S27 C24 SING N N 10 VM0 C24 C23 SING N N 11 VM0 C24 C25 SING N N 12 VM0 O22 C23 SING N N 13 VM0 O22 C02 SING N N 14 VM0 C16 N15 SING N N 15 VM0 C16 C17 SING N N 16 VM0 C02 N03 SING N N 17 VM0 C02 O01 DOUB N N 18 VM0 N03 C04 SING N N 19 VM0 N15 C14 SING N N 20 VM0 O21 C09 DOUB N N 21 VM0 C17 C13 SING N N 22 VM0 C13 C14 SING N N 23 VM0 C13 C12 SING N N 24 VM0 C09 C04 SING N N 25 VM0 C09 N10 SING N N 26 VM0 C14 O18 DOUB N N 27 VM0 C04 C05 SING N N 28 VM0 C06 C05 SING N N 29 VM0 C06 C08 SING N N 30 VM0 C06 C07 SING N N 31 VM0 N10 C11 SING N N 32 VM0 C11 C12 SING N N 33 VM0 C11 C19 SING N N 34 VM0 C19 O20 SING N N 35 VM0 C19 S2 SING N N 36 VM0 C31 H1 SING N N 37 VM0 C34 H2 SING N N 38 VM0 N10 H3 SING N N 39 VM0 N15 H4 SING N N 40 VM0 C11 H5 SING N N 41 VM0 C13 H6 SING N N 42 VM0 C12 H7 SING N N 43 VM0 C12 H8 SING N N 44 VM0 C16 H10 SING N N 45 VM0 C16 H11 SING N N 46 VM0 C17 H12 SING N N 47 VM0 C17 H13 SING N N 48 VM0 C19 H14 SING N N 49 VM0 C23 H15 SING N N 50 VM0 C23 H16 SING N N 51 VM0 C29 H17 SING N N 52 VM0 C30 H18 SING N N 53 VM0 C25 H19 SING N N 54 VM0 C25 H20 SING N N 55 VM0 C25 H21 SING N N 56 VM0 C26 H22 SING N N 57 VM0 C26 H23 SING N N 58 VM0 C26 H24 SING N N 59 VM0 C04 H25 SING N N 60 VM0 C05 H26 SING N N 61 VM0 C05 H27 SING N N 62 VM0 C06 H28 SING N N 63 VM0 C07 H29 SING N N 64 VM0 C07 H30 SING N N 65 VM0 C07 H31 SING N N 66 VM0 C08 H32 SING N N 67 VM0 C08 H33 SING N N 68 VM0 C08 H34 SING N N 69 VM0 N03 H35 SING N N 70 VM0 O20 H36 SING N N 71 VM0 S2 O1 DOUB N N 72 VM0 S2 O2 SING N N 73 VM0 S2 O3 DOUB N N 74 VM0 O2 H9 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VM0 SMILES ACDLabs 12.01 "CC(C)CC(NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O" VM0 InChI InChI 1.06 "InChI=1S/C24H36ClN3O8S2/c1-14(2)10-18(28-23(32)36-13-24(3,4)37-17-7-5-6-16(25)12-17)21(30)27-19(22(31)38(33,34)35)11-15-8-9-26-20(15)29/h5-7,12,14-15,18-19,22,31H,8-11,13H2,1-4H3,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t15-,18-,19-,22-/m0/s1" VM0 InChIKey InChI 1.06 MOYGJNHMYWCTOO-BCSOYYNPSA-N VM0 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O" VM0 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OCC(C)(C)Sc1cccc(Cl)c1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O" VM0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl" VM0 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC(C)(C)Sc2cccc(c2)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VM0 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-2-{[N-({2-[(3-chlorophenyl)sulfanyl]-2-methylpropoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" VM0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-2-[[2-(3-chlorophenyl)sulfanyl-2-methyl-propoxy]carbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VM0 "Create component" 2022-08-30 RCSB VM0 "Initial release" 2022-09-07 RCSB #