data_VN1 # _chem_comp.id VN1 _chem_comp.name "4-[(1-{(1S,2S)-1-[1-(4-aminobutyl)-1H-1,2,3-triazol-4-yl]-2-methylbutyl}-1H-1,2,3-triazol-4-yl)methoxy]-3-methoxybenzene-1-carboximidamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H33 N9 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-08-28 _chem_comp.pdbx_modified_date 2021-07-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 455.557 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VN1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JWX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VN1 C1 C1 C 0 1 N N N 27.199 -43.610 2.631 5.544 -1.099 -1.430 C1 VN1 1 VN1 C10 C2 C 0 1 Y N N 35.151 -35.018 4.845 -5.488 -0.806 -0.098 C10 VN1 2 VN1 C11 C3 C 0 1 N N N 36.234 -34.030 4.933 -6.947 -0.598 -0.228 C11 VN1 3 VN1 C12 C4 C 0 1 Y N N 35.455 -36.361 4.606 -4.599 0.148 -0.598 C12 VN1 4 VN1 C13 C5 C 0 1 Y N N 34.465 -37.338 4.533 -3.237 -0.050 -0.474 C13 VN1 5 VN1 C14 C6 C 0 1 N N N 35.935 -38.936 3.546 -2.933 2.030 -1.587 C14 VN1 6 VN1 C15 C7 C 0 1 Y N N 29.919 -43.172 4.319 3.684 0.014 0.523 C15 VN1 7 VN1 C16 C8 C 0 1 Y N N 30.420 -44.013 5.327 3.166 0.859 -0.398 C16 VN1 8 VN1 C17 C9 C 0 1 N N N 32.542 -45.550 5.505 2.738 3.331 -0.471 C17 VN1 9 VN1 C18 C10 C 0 1 N N N 33.471 -44.864 6.524 1.711 4.012 0.436 C18 VN1 10 VN1 C19 C11 C 0 1 N N N 34.628 -45.747 6.987 1.229 5.306 -0.222 C19 VN1 11 VN1 C2 C12 C 0 1 N N S 27.922 -42.263 2.965 4.239 -1.808 -1.065 C2 VN1 12 VN1 C20 C13 C 0 1 N N N 35.799 -44.833 7.346 0.202 5.988 0.685 C20 VN1 13 VN1 C21 C14 C 0 1 N N N 26.899 -41.130 2.897 4.423 -3.320 -1.210 C21 VN1 14 VN1 C22 C15 C 0 1 N N N 25.976 -41.055 4.103 4.673 -3.665 -2.679 C22 VN1 15 VN1 C3 C16 C 0 1 N N S 28.691 -42.316 4.332 3.865 -1.476 0.381 C3 VN1 16 VN1 C4 C17 C 0 1 Y N N 29.821 -40.071 4.023 1.367 -1.701 0.472 C4 VN1 17 VN1 C5 C18 C 0 1 Y N N 30.048 -38.990 4.865 0.517 -2.634 0.961 C5 VN1 18 VN1 C6 C19 C 0 1 N N N 30.789 -37.755 4.496 -0.988 -2.593 0.920 C6 VN1 19 VN1 C7 C20 C 0 1 Y N N 33.111 -37.035 4.695 -2.754 -1.199 0.150 C7 VN1 20 VN1 C8 C21 C 0 1 Y N N 32.797 -35.682 4.941 -3.638 -2.146 0.646 C8 VN1 21 VN1 C9 C22 C 0 1 Y N N 33.789 -34.707 5.016 -4.998 -1.951 0.530 C9 VN1 22 VN1 N1 N1 N 0 1 Y N N 29.123 -40.996 4.793 2.615 -2.155 0.730 N1 VN1 23 VN1 N2 N2 N 0 1 N N N 35.939 -32.715 5.249 -7.824 -1.537 0.271 N2 VN1 24 VN1 N3 N3 N 0 1 N N N 37.565 -34.364 4.738 -7.403 0.473 -0.814 N3 VN1 25 VN1 N4 N4 N 0 1 Y N N 29.502 -39.342 6.128 1.277 -3.600 1.489 N4 VN1 26 VN1 N5 N5 N 0 1 Y N N 28.985 -40.494 6.078 2.515 -3.286 1.336 N5 VN1 27 VN1 N6 N6 N 0 1 Y N N 31.611 -44.563 4.819 3.199 2.091 0.159 N6 VN1 28 VN1 N7 N7 N 0 1 N N N 35.601 -44.022 8.688 -0.261 7.231 0.053 N7 VN1 29 VN1 N8 N8 N 0 1 Y N N 31.812 -44.038 3.550 3.704 1.987 1.338 N8 VN1 30 VN1 N9 N9 N 0 1 Y N N 30.845 -43.236 3.278 4.010 0.762 1.584 N9 VN1 31 VN1 O1 O1 O 0 1 N N N 32.182 -38.038 4.617 -1.414 -1.393 0.271 O1 VN1 32 VN1 O2 O2 O 0 1 N N N 34.773 -38.657 4.290 -2.368 0.876 -0.960 O2 VN1 33 VN1 H1 H1 H 0 1 N N N 27.923 -44.437 2.676 5.414 -0.021 -1.327 H1 VN1 34 VN1 H2 H2 H 0 1 N N N 26.396 -43.786 3.362 6.339 -1.434 -0.763 H2 VN1 35 VN1 H3 H3 H 0 1 N N N 26.769 -43.554 1.620 5.811 -1.335 -2.460 H3 VN1 36 VN1 H4 H4 H 0 1 N N N 36.487 -36.650 4.474 -4.975 1.038 -1.080 H4 VN1 37 VN1 H5 H5 H 0 1 N N N 36.047 -40.025 3.435 -2.133 2.686 -1.929 H5 VN1 38 VN1 H6 H6 H 0 1 N N N 35.854 -38.473 2.552 -3.538 1.720 -2.439 H6 VN1 39 VN1 H7 H7 H 0 1 N N N 36.812 -38.528 4.070 -3.559 2.562 -0.871 H7 VN1 40 VN1 H8 H8 H 0 1 N N N 29.980 -44.199 6.295 2.801 0.601 -1.382 H8 VN1 41 VN1 H9 H9 H 0 1 N N N 31.935 -46.303 6.030 2.278 3.101 -1.432 H9 VN1 42 VN1 H10 H10 H 0 1 N N N 33.159 -46.045 4.740 3.586 3.998 -0.624 H10 VN1 43 VN1 H11 H11 H 0 1 N N N 33.889 -43.959 6.059 0.862 3.345 0.589 H11 VN1 44 VN1 H12 H12 H 0 1 N N N 32.874 -44.583 7.404 2.170 4.242 1.397 H12 VN1 45 VN1 H13 H13 H 0 1 N N N 34.324 -46.330 7.869 2.077 5.973 -0.375 H13 VN1 46 VN1 H14 H14 H 0 1 N N N 34.922 -46.432 6.178 0.769 5.076 -1.183 H14 VN1 47 VN1 H15 H15 H 0 1 N N N 28.669 -42.088 2.177 3.445 -1.473 -1.732 H15 VN1 48 VN1 H16 H16 H 0 1 N N N 36.702 -45.453 7.448 -0.646 5.321 0.838 H16 VN1 49 VN1 H17 H17 H 0 1 N N N 35.939 -44.114 6.526 0.662 6.218 1.646 H17 VN1 50 VN1 H18 H18 H 0 1 N N N 27.443 -40.177 2.818 5.274 -3.642 -0.610 H18 VN1 51 VN1 H19 H19 H 0 1 N N N 26.282 -41.275 1.998 3.523 -3.830 -0.865 H19 VN1 52 VN1 H20 H20 H 0 1 N N N 25.274 -40.218 3.977 5.573 -3.155 -3.023 H20 VN1 53 VN1 H21 H21 H 0 1 N N N 25.413 -41.996 4.192 4.804 -4.742 -2.782 H21 VN1 54 VN1 H22 H22 H 0 1 N N N 26.574 -40.898 5.013 3.822 -3.343 -3.278 H22 VN1 55 VN1 H23 H23 H 0 1 N N N 27.997 -42.732 5.077 4.660 -1.811 1.048 H23 VN1 56 VN1 H24 H24 H 0 1 N N N 30.122 -40.172 2.991 1.102 -0.782 -0.029 H24 VN1 57 VN1 H25 H25 H 0 1 N N N 30.512 -36.934 5.174 -1.361 -3.456 0.368 H25 VN1 58 VN1 H26 H26 H 0 1 N N N 30.552 -37.470 3.460 -1.381 -2.615 1.937 H26 VN1 59 VN1 H27 H27 H 0 1 N N N 31.764 -35.396 5.074 -3.260 -3.036 1.128 H27 VN1 60 VN1 H28 H28 H 0 1 N N N 33.505 -33.683 5.211 -5.685 -2.688 0.920 H28 VN1 61 VN1 H29 H29 H 0 1 N N N 34.992 -32.441 5.416 -7.484 -2.334 0.707 H29 VN1 62 VN1 H30 H30 H 0 1 N N N 36.673 -32.039 5.310 -8.780 -1.401 0.186 H30 VN1 63 VN1 H31 H31 H 0 1 N N N 38.170 -33.577 4.856 -8.360 0.609 -0.899 H31 VN1 64 VN1 H32 H32 H 0 1 N N N 36.404 -43.450 8.854 -0.940 7.700 0.633 H32 VN1 65 VN1 H33 H33 H 0 1 N N N 34.790 -43.442 8.611 0.516 7.839 -0.159 H33 VN1 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VN1 C1 C2 SING N N 1 VN1 C21 C2 SING N N 2 VN1 C21 C22 SING N N 3 VN1 C2 C3 SING N N 4 VN1 N9 N8 DOUB Y N 5 VN1 N9 C15 SING Y N 6 VN1 C14 O2 SING N N 7 VN1 N8 N6 SING Y N 8 VN1 C4 N1 SING Y N 9 VN1 C4 C5 DOUB Y N 10 VN1 O2 C13 SING N N 11 VN1 C15 C3 SING N N 12 VN1 C15 C16 DOUB Y N 13 VN1 C3 N1 SING N N 14 VN1 C6 O1 SING N N 15 VN1 C6 C5 SING N N 16 VN1 C13 C12 DOUB Y N 17 VN1 C13 C7 SING Y N 18 VN1 C12 C10 SING Y N 19 VN1 O1 C7 SING N N 20 VN1 C7 C8 DOUB Y N 21 VN1 N3 C11 DOUB N N 22 VN1 N1 N5 SING Y N 23 VN1 N6 C16 SING Y N 24 VN1 N6 C17 SING N N 25 VN1 C10 C11 SING N N 26 VN1 C10 C9 DOUB Y N 27 VN1 C5 N4 SING Y N 28 VN1 C11 N2 SING N N 29 VN1 C8 C9 SING Y N 30 VN1 C17 C18 SING N N 31 VN1 N5 N4 DOUB Y N 32 VN1 C18 C19 SING N N 33 VN1 C19 C20 SING N N 34 VN1 C20 N7 SING N N 35 VN1 C1 H1 SING N N 36 VN1 C1 H2 SING N N 37 VN1 C1 H3 SING N N 38 VN1 C12 H4 SING N N 39 VN1 C14 H5 SING N N 40 VN1 C14 H6 SING N N 41 VN1 C14 H7 SING N N 42 VN1 C16 H8 SING N N 43 VN1 C17 H9 SING N N 44 VN1 C17 H10 SING N N 45 VN1 C18 H11 SING N N 46 VN1 C18 H12 SING N N 47 VN1 C19 H13 SING N N 48 VN1 C19 H14 SING N N 49 VN1 C2 H15 SING N N 50 VN1 C20 H16 SING N N 51 VN1 C20 H17 SING N N 52 VN1 C21 H18 SING N N 53 VN1 C21 H19 SING N N 54 VN1 C22 H20 SING N N 55 VN1 C22 H21 SING N N 56 VN1 C22 H22 SING N N 57 VN1 C3 H23 SING N N 58 VN1 C4 H24 SING N N 59 VN1 C6 H25 SING N N 60 VN1 C6 H26 SING N N 61 VN1 C8 H27 SING N N 62 VN1 C9 H28 SING N N 63 VN1 N2 H29 SING N N 64 VN1 N2 H30 SING N N 65 VN1 N3 H31 SING N N 66 VN1 N7 H32 SING N N 67 VN1 N7 H33 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VN1 SMILES ACDLabs 12.01 "CC(C(c1cn(CCCCN)nn1)n2cc(nn2)COc3c(cc(/C(N)=N)cc3)OC)CC" VN1 InChI InChI 1.03 "InChI=1S/C22H33N9O2/c1-4-15(2)21(18-13-30(28-27-18)10-6-5-9-23)31-12-17(26-29-31)14-33-19-8-7-16(22(24)25)11-20(19)32-3/h7-8,11-13,15,21H,4-6,9-10,14,23H2,1-3H3,(H3,24,25)/t15-,21-/m0/s1" VN1 InChIKey InChI 1.03 DNIWQYWTKVVYDZ-BTYIYWSLSA-N VN1 SMILES_CANONICAL CACTVS 3.385 "CC[C@H](C)[C@H](n1cc(COc2ccc(cc2OC)C(N)=N)nn1)c3cn(CCCCN)nn3" VN1 SMILES CACTVS 3.385 "CC[CH](C)[CH](n1cc(COc2ccc(cc2OC)C(N)=N)nn1)c3cn(CCCCN)nn3" VN1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\c1ccc(c(c1)OC)OCc2cn(nn2)[C@H](c3cn(nn3)CCCCN)[C@@H](C)CC)/N" VN1 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)C(c1cn(nn1)CCCCN)n2cc(nn2)COc3ccc(cc3OC)C(=N)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VN1 "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(1-{(1S,2S)-1-[1-(4-aminobutyl)-1H-1,2,3-triazol-4-yl]-2-methylbutyl}-1H-1,2,3-triazol-4-yl)methoxy]-3-methoxybenzene-1-carboximidamide" VN1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[1-[(1~{S},2~{S})-1-[1-(4-azanylbutyl)-1,2,3-triazol-4-yl]-2-methyl-butyl]-1,2,3-triazol-4-yl]methoxy]-3-methoxy-benzenecarboximidamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VN1 "Create component" 2020-08-28 RCSB VN1 "Initial release" 2021-08-04 RCSB ##