data_VNT # _chem_comp.id VNT _chem_comp.name "N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H18 Cl2 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-08-01 _chem_comp.pdbx_modified_date 2013-07-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 505.355 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VNT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4G3J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VNT CBA CBA C 0 1 Y N N -31.747 -20.246 44.590 5.337 0.918 0.584 CBA VNT 1 VNT CAQ CAQ C 0 1 Y N N -32.912 -19.589 44.217 5.914 2.162 0.405 CAQ VNT 2 VNT CAZ CAZ C 0 1 Y N N -32.914 -18.754 43.110 5.344 3.069 -0.469 CAZ VNT 3 VNT CAI CAI C 0 1 Y N N -31.748 -18.573 42.381 4.197 2.732 -1.165 CAI VNT 4 VNT CAN CAN C 0 1 Y N N -30.583 -19.230 42.756 3.620 1.489 -0.986 CAN VNT 5 VNT CBE CBE C 0 1 Y N N -30.580 -20.075 43.858 4.193 0.580 -0.116 CBE VNT 6 VNT CBH CBH C 0 1 N N R -29.412 -20.736 44.255 3.564 -0.776 0.078 CBH VNT 7 VNT CAR CAR C 0 1 N N N -28.172 -19.897 43.978 4.247 -1.792 -0.840 CAR VNT 8 VNT NBI NBI N 0 1 Y N N -27.935 -18.861 44.940 3.718 -3.130 -0.566 NBI VNT 9 VNT NAT NAT N 0 1 Y N N -27.697 -18.943 46.114 3.683 -3.783 0.677 NAT VNT 10 VNT CAO CAO C 0 1 Y N N -27.517 -17.717 46.602 3.133 -4.951 0.474 CAO VNT 11 VNT NAS NAS N 0 1 Y N N -27.655 -16.874 45.590 2.823 -5.066 -0.817 NAS VNT 12 VNT CAP CAP C 0 1 Y N N -27.918 -17.602 44.536 3.165 -3.975 -1.454 CAP VNT 13 VNT NAW NAW N 0 1 N N N -29.180 -21.965 43.507 2.137 -0.704 -0.249 NAW VNT 14 VNT CAY CAY C 0 1 N N N -28.521 -22.965 44.086 1.245 -0.354 0.699 CAY VNT 15 VNT OAA OAA O 0 1 N N N -28.166 -22.943 45.264 1.624 -0.099 1.825 OAA VNT 16 VNT CBB CBB C 0 1 Y N N -28.172 -24.029 43.273 -0.193 -0.282 0.369 CBB VNT 17 VNT CAJ CAJ C 0 1 Y N N -26.997 -24.693 43.572 -1.117 0.080 1.352 CAJ VNT 18 VNT CAL CAL C 0 1 Y N N -26.588 -25.757 42.800 -2.457 0.148 1.045 CAL VNT 19 VNT CAK CAK C 0 1 Y N N -28.934 -24.416 42.180 -0.627 -0.570 -0.928 CAK VNT 20 VNT CAM CAM C 0 1 Y N N -28.524 -25.487 41.395 -1.966 -0.497 -1.237 CAM VNT 21 VNT CBD CBD C 0 1 Y N N -27.343 -26.145 41.705 -2.893 -0.146 -0.251 CBD VNT 22 VNT CBG CBG C 0 1 Y N N -26.947 -27.167 40.993 -4.329 -0.068 -0.582 CBG VNT 23 VNT OAX OAX O 0 1 Y N N -26.418 -28.092 41.478 -5.327 0.256 0.266 OAX VNT 24 VNT NAV NAV N 0 1 Y N N -27.088 -27.316 39.682 -4.870 -0.296 -1.758 NAV VNT 25 VNT NAU NAU N 0 1 Y N N -26.630 -28.313 39.449 -6.143 -0.131 -1.681 NAU VNT 26 VNT CBF CBF C 0 1 Y N N -26.201 -28.805 40.611 -6.467 0.205 -0.452 CBF VNT 27 VNT CBC CBC C 0 1 Y N N -25.598 -29.965 40.769 -7.829 0.483 0.049 CBC VNT 28 VNT CAG CAG C 0 1 Y N N -24.784 -30.186 41.876 -8.923 0.401 -0.814 CAG VNT 29 VNT CAE CAE C 0 1 Y N N -24.162 -31.412 42.044 -10.192 0.662 -0.340 CAE VNT 30 VNT CAD CAD C 0 1 Y N N -24.363 -32.422 41.112 -10.382 1.004 0.987 CAD VNT 31 VNT CAF CAF C 0 1 Y N N -25.181 -32.205 40.010 -9.301 1.087 1.847 CAF VNT 32 VNT CAH CAH C 0 1 Y N N -25.803 -30.974 39.842 -8.028 0.824 1.388 CAH VNT 33 VNT CLC CLC CL 0 0 N N N -31.769 -21.242 45.915 6.051 -0.221 1.682 CLC VNT 34 VNT CLB CLB CL 0 0 N N N -34.349 -17.951 42.663 6.068 4.631 -0.694 CLB VNT 35 VNT H1 H1 H 0 1 N N N -33.817 -19.728 44.789 6.810 2.425 0.949 H1 VNT 36 VNT H2 H2 H 0 1 N N N -31.746 -17.920 41.521 3.749 3.442 -1.844 H2 VNT 37 VNT H3 H3 H 0 1 N N N -29.676 -19.083 42.188 2.724 1.226 -1.529 H3 VNT 38 VNT H4 H4 H 0 1 N N N -29.449 -20.963 45.331 3.683 -1.087 1.116 H4 VNT 39 VNT H5 H5 H 0 1 N N N -27.298 -20.565 43.969 4.052 -1.530 -1.880 H5 VNT 40 VNT H6 H6 H 0 1 N N N -28.286 -19.429 42.989 5.321 -1.781 -0.658 H6 VNT 41 VNT H7 H7 H 0 1 N N N -27.300 -17.459 47.628 2.957 -5.702 1.230 H7 VNT 42 VNT H8 H8 H 0 1 N N N -28.088 -17.245 43.531 3.030 -3.787 -2.509 H8 VNT 43 VNT H9 H9 H 0 1 N N N -29.513 -22.056 42.568 1.835 -0.908 -1.148 H9 VNT 44 VNT H10 H10 H 0 1 N N N -26.398 -24.376 44.413 -0.781 0.308 2.352 H10 VNT 45 VNT H11 H11 H 0 1 N N N -25.681 -26.288 43.047 -3.172 0.427 1.804 H11 VNT 46 VNT H12 H12 H 0 1 N N N -29.844 -23.886 41.940 0.087 -0.850 -1.687 H12 VNT 47 VNT H13 H13 H 0 1 N N N -29.119 -25.804 40.552 -2.303 -0.724 -2.237 H13 VNT 48 VNT H14 H14 H 0 1 N N N -24.637 -29.402 42.604 -8.777 0.134 -1.850 H14 VNT 49 VNT H15 H15 H 0 1 N N N -23.522 -31.582 42.897 -11.040 0.599 -1.007 H15 VNT 50 VNT H16 H16 H 0 1 N N N -23.882 -33.380 41.244 -11.377 1.208 1.353 H16 VNT 51 VNT H17 H17 H 0 1 N N N -25.333 -32.991 39.286 -9.456 1.356 2.882 H17 VNT 52 VNT H18 H18 H 0 1 N N N -26.445 -30.804 38.990 -7.185 0.889 2.060 H18 VNT 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VNT NAU NAV SING Y N 1 VNT NAU CBF DOUB Y N 2 VNT NAV CBG DOUB Y N 3 VNT CAH CAF DOUB Y N 4 VNT CAH CBC SING Y N 5 VNT CAF CAD SING Y N 6 VNT CBF CBC SING N N 7 VNT CBF OAX SING Y N 8 VNT CBC CAG DOUB Y N 9 VNT CBG OAX SING Y N 10 VNT CBG CBD SING N N 11 VNT CAD CAE DOUB Y N 12 VNT CAM CBD DOUB Y N 13 VNT CAM CAK SING Y N 14 VNT CBD CAL SING Y N 15 VNT CAG CAE SING Y N 16 VNT CAK CBB DOUB Y N 17 VNT CAI CAN DOUB Y N 18 VNT CAI CAZ SING Y N 19 VNT CLB CAZ SING N N 20 VNT CAN CBE SING Y N 21 VNT CAL CAJ DOUB Y N 22 VNT CAZ CAQ DOUB Y N 23 VNT CBB CAJ SING Y N 24 VNT CBB CAY SING N N 25 VNT NAW CAY SING N N 26 VNT NAW CBH SING N N 27 VNT CBE CBH SING N N 28 VNT CBE CBA DOUB Y N 29 VNT CAR CBH SING N N 30 VNT CAR NBI SING N N 31 VNT CAY OAA DOUB N N 32 VNT CAQ CBA SING Y N 33 VNT CAP NBI SING Y N 34 VNT CAP NAS DOUB Y N 35 VNT CBA CLC SING N N 36 VNT NBI NAT SING Y N 37 VNT NAS CAO SING Y N 38 VNT NAT CAO DOUB Y N 39 VNT CAQ H1 SING N N 40 VNT CAI H2 SING N N 41 VNT CAN H3 SING N N 42 VNT CBH H4 SING N N 43 VNT CAR H5 SING N N 44 VNT CAR H6 SING N N 45 VNT CAO H7 SING N N 46 VNT CAP H8 SING N N 47 VNT NAW H9 SING N N 48 VNT CAJ H10 SING N N 49 VNT CAL H11 SING N N 50 VNT CAK H12 SING N N 51 VNT CAM H13 SING N N 52 VNT CAG H14 SING N N 53 VNT CAE H15 SING N N 54 VNT CAD H16 SING N N 55 VNT CAF H17 SING N N 56 VNT CAH H18 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VNT SMILES ACDLabs 12.01 "Clc1ccc(c(Cl)c1)C(NC(=O)c4ccc(c2nnc(o2)c3ccccc3)cc4)Cn5ncnc5" VNT InChI InChI 1.03 "InChI=1S/C25H18Cl2N6O2/c26-19-10-11-20(21(27)12-19)22(13-33-15-28-14-29-33)30-23(34)16-6-8-18(9-7-16)25-32-31-24(35-25)17-4-2-1-3-5-17/h1-12,14-15,22H,13H2,(H,30,34)/t22-/m0/s1" VNT InChIKey InChI 1.03 KSMSKLCCSVEWDM-QFIPXVFZSA-N VNT SMILES_CANONICAL CACTVS 3.385 "Clc1ccc([C@H](Cn2cncn2)NC(=O)c3ccc(cc3)c4oc(nn4)c5ccccc5)c(Cl)c1" VNT SMILES CACTVS 3.385 "Clc1ccc([CH](Cn2cncn2)NC(=O)c3ccc(cc3)c4oc(nn4)c5ccccc5)c(Cl)c1" VNT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)c2nnc(o2)c3ccc(cc3)C(=O)N[C@@H](Cn4cncn4)c5ccc(cc5Cl)Cl" VNT SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)c2nnc(o2)c3ccc(cc3)C(=O)NC(Cn4cncn4)c5ccc(cc5Cl)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VNT "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide" VNT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[(1R)-1-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VNT "Create component" 2012-08-01 RCSB VNT "Other modification" 2013-06-25 RCSB VNT "Initial release" 2013-07-17 RCSB #