data_VOV # _chem_comp.id VOV _chem_comp.name "harderoheme (III)" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H34 Fe N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-03-12 _chem_comp.pdbx_modified_date 2019-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 662.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VOV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 6FXQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VOV C06 C1 C 0 1 N N N -20.505 19.313 124.978 ? ? ? C06 VOV 1 VOV C07 C2 C 0 1 N N N -19.428 19.440 124.090 ? ? ? C07 VOV 2 VOV C08 C3 C 0 1 N N N -19.449 20.099 122.854 ? ? ? C08 VOV 3 VOV C09 C4 C 0 1 N N N -18.165 19.945 122.304 ? ? ? C09 VOV 4 VOV C10 C5 C 0 1 N N N -17.446 19.219 123.225 ? ? ? C10 VOV 5 VOV C11 C6 C 0 1 N N N -20.643 20.833 122.251 ? ? ? C11 VOV 6 VOV C12 C7 C 0 1 N N N -17.558 20.451 121.001 ? ? ? C12 VOV 7 VOV C13 C8 C 0 1 N N N -17.462 22.002 121.024 ? ? ? C13 VOV 8 VOV C14 C9 C 0 1 N N N -16.180 22.601 121.606 ? ? ? C14 VOV 9 VOV C17 C10 C 0 1 N N N -16.145 18.823 123.024 ? ? ? C17 VOV 10 VOV C18 C11 C 0 1 N N N -15.462 17.801 123.699 ? ? ? C18 VOV 11 VOV C19 C12 C 0 1 N N N -14.276 17.176 123.266 ? ? ? C19 VOV 12 VOV C20 C13 C 0 1 N N N -13.927 16.245 124.252 ? ? ? C20 VOV 13 VOV C21 C14 C 0 1 N N N -14.899 16.392 125.248 ? ? ? C21 VOV 14 VOV C22 C15 C 0 1 N N N -13.567 17.463 121.954 ? ? ? C22 VOV 15 VOV C23 C16 C 0 1 N N N -12.728 15.322 124.299 ? ? ? C23 VOV 16 VOV C24 C17 C 0 1 N N N -11.589 16.099 124.935 ? ? ? C24 VOV 17 VOV C25 C18 C 0 1 N N N -10.231 15.453 125.157 ? ? ? C25 VOV 18 VOV C28 C19 C 0 1 N N N -14.902 15.691 126.452 ? ? ? C28 VOV 19 VOV C29 C20 C 0 1 Y N N -15.855 15.844 127.483 ? ? ? C29 VOV 20 VOV C30 C21 C 0 1 Y N N -15.807 15.139 128.698 ? ? ? C30 VOV 21 VOV C31 C22 C 0 1 Y N N -16.949 15.560 129.408 ? ? ? C31 VOV 22 VOV C32 C23 C 0 1 Y N N -17.611 16.479 128.582 ? ? ? C32 VOV 23 VOV C33 C24 C 0 1 N N N -17.493 15.186 130.801 ? ? ? C33 VOV 24 VOV C34 C25 C 0 1 N N N -14.680 14.161 129.096 ? ? ? C34 VOV 25 VOV C35 C26 C 0 1 N N N -15.110 13.031 130.038 ? ? ? C35 VOV 26 VOV C36 C27 C 0 1 N N N -15.923 11.975 129.314 ? ? ? C36 VOV 27 VOV C39 C28 C 0 1 N N N -18.824 17.081 128.925 ? ? ? C39 VOV 28 VOV C40 C29 C 0 1 N N N -19.696 17.701 128.014 ? ? ? C40 VOV 29 VOV C41 C30 C 0 1 N N N -21.054 17.981 128.274 ? ? ? C41 VOV 30 VOV C42 C31 C 0 1 N N N -21.537 18.631 127.103 ? ? ? C42 VOV 31 VOV C43 C32 C 0 1 N N N -20.446 18.701 126.228 ? ? ? C43 VOV 32 VOV C44 C33 C 0 1 N N N -21.822 17.644 129.555 ? ? ? C44 VOV 33 VOV C45 C34 C 0 1 N N N -22.942 19.175 126.831 ? ? ? C45 VOV 34 VOV C46 C35 C 0 1 N N N -24.076 18.579 126.416 ? ? ? C46 VOV 35 VOV N02 N1 N 0 1 N N S -18.188 18.891 124.333 ? ? ? N02 VOV 36 VOV N03 N2 N 0 1 N N N -15.853 17.328 124.922 ? ? ? N03 VOV 37 VOV N04 N3 N 0 1 Y N N -16.959 16.667 127.386 ? ? ? N04 VOV 38 VOV N05 N4 N 0 1 N N N -19.307 18.128 126.762 ? ? ? N05 VOV 39 VOV O15 O1 O 0 1 N N N -15.397 21.747 122.063 ? ? ? O15 VOV 40 VOV O16 O2 O 0 1 N N N -15.955 23.845 121.593 ? ? ? O16 VOV 41 VOV O26 O3 O 0 1 N N N -10.081 14.251 125.550 ? ? ? O26 VOV 42 VOV O27 O4 O 0 1 N N N -9.326 16.258 124.885 ? ? ? O27 VOV 43 VOV O37 O5 O 0 1 N N N -17.079 12.309 128.976 ? ? ? O37 VOV 44 VOV O38 O6 O 0 1 N N N -15.354 10.889 129.098 ? ? ? O38 VOV 45 VOV FE FE1 FE 0 0 N N N -17.499 17.919 125.919 ? ? ? FE01 VOV 46 VOV H061 H1 H 0 0 N N N -21.456 19.722 124.669 ? ? ? H061 VOV 47 VOV H112 H2 H 0 0 N N N -21.500 20.766 122.938 ? ? ? H112 VOV 48 VOV H111 H3 H 0 0 N N N -20.382 21.890 122.092 ? ? ? H111 VOV 49 VOV H113 H4 H 0 0 N N N -20.908 20.372 121.288 ? ? ? H113 VOV 50 VOV H122 H5 H 0 0 N N N -18.192 20.138 120.158 ? ? ? H122 VOV 51 VOV H121 H6 H 0 0 N N N -16.551 20.026 120.879 ? ? ? H121 VOV 52 VOV H132 H7 H 0 0 N N N -17.556 22.357 119.987 ? ? ? H132 VOV 53 VOV H131 H8 H 0 0 N N N -18.307 22.380 121.619 ? ? ? H131 VOV 54 VOV H171 H9 H 0 0 N N N -15.590 19.355 122.266 ? ? ? H171 VOV 55 VOV H222 H10 H 0 0 N N N -12.669 16.833 121.876 ? ? ? H222 VOV 56 VOV H223 H11 H 0 0 N N N -14.244 17.242 121.116 ? ? ? H223 VOV 57 VOV H221 H12 H 0 0 N N N -13.275 18.523 121.919 ? ? ? H221 VOV 58 VOV H232 H13 H 0 0 N N N -12.961 14.432 124.902 ? ? ? H232 VOV 59 VOV H231 H14 H 0 0 N N N -12.451 15.012 123.281 ? ? ? H231 VOV 60 VOV H242 H15 H 0 0 N N N -11.417 16.979 124.298 ? ? ? H242 VOV 61 VOV H241 H16 H 0 0 N N N -11.946 16.425 125.923 ? ? ? H241 VOV 62 VOV H281 H17 H 0 0 N N N -14.111 14.972 126.610 ? ? ? H281 VOV 63 VOV H331 H18 H 0 0 N N N -18.170 14.324 130.711 ? ? ? H331 VOV 64 VOV H332 H19 H 0 0 N N N -16.655 14.927 131.464 ? ? ? H332 VOV 65 VOV H333 H20 H 0 0 N N N -18.042 16.041 131.222 ? ? ? H333 VOV 66 VOV H341 H21 H 0 0 N N N -14.281 13.707 128.177 ? ? ? H341 VOV 67 VOV H342 H22 H 0 0 N N N -13.887 14.738 129.594 ? ? ? H342 VOV 68 VOV H352 H23 H 0 0 N N N -14.211 12.560 130.463 ? ? ? H352 VOV 69 VOV H351 H24 H 0 0 N N N -15.719 13.456 130.849 ? ? ? H351 VOV 70 VOV H391 H25 H 0 0 N N N -19.113 17.069 129.966 ? ? ? H391 VOV 71 VOV H441 H26 H 0 0 N N N -21.149 17.140 130.265 ? ? ? H441 VOV 72 VOV H442 H27 H 0 0 N N N -22.205 18.571 130.007 ? ? ? H442 VOV 73 VOV H443 H28 H 0 0 N N N -22.664 16.979 129.313 ? ? ? H443 VOV 74 VOV H451 H29 H 0 0 N N N -23.043 20.236 127.005 ? ? ? H451 VOV 75 VOV H462 H30 H 0 0 N N N -24.976 19.162 126.286 ? ? ? H462 VOV 76 VOV H461 H31 H 0 0 N N N -24.086 17.518 126.213 ? ? ? H461 VOV 77 VOV H1 H32 H 0 1 N N N -14.617 22.177 122.394 ? ? ? H1 VOV 78 VOV H2 H33 H 0 1 N N N -9.154 14.050 125.608 ? ? ? H2 VOV 79 VOV H3 H34 H 0 1 N N N -15.939 10.314 128.618 ? ? ? H3 VOV 80 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VOV C12 C13 SING N N 1 VOV C12 C09 SING N N 2 VOV C13 C14 SING N N 3 VOV O16 C14 DOUB N N 4 VOV C14 O15 SING N N 5 VOV C22 C19 SING N N 6 VOV C11 C08 SING N N 7 VOV C09 C08 DOUB N N 8 VOV C09 C10 SING N N 9 VOV C08 C07 SING N N 10 VOV C17 C10 DOUB N N 11 VOV C17 C18 SING N N 12 VOV C10 N02 SING N N 13 VOV C19 C18 SING N N 14 VOV C19 C20 DOUB N N 15 VOV C18 N03 DOUB N N 16 VOV C07 N02 SING N N 17 VOV C07 C06 DOUB N N 18 VOV C20 C23 SING N N 19 VOV C20 C21 SING N N 20 VOV C23 C24 SING N N 21 VOV N02 FE SING N N 22 VOV O27 C25 DOUB N N 23 VOV N03 C21 SING N N 24 VOV N03 FE SING N N 25 VOV C24 C25 SING N N 26 VOV C06 C43 SING N N 27 VOV C25 O26 SING N N 28 VOV C21 C28 DOUB N N 29 VOV FE N05 SING N N 30 VOV FE N04 SING N N 31 VOV C43 N05 DOUB N N 32 VOV C43 C42 SING N N 33 VOV C46 C45 DOUB N N 34 VOV C28 C29 SING N N 35 VOV N05 C40 SING N N 36 VOV C45 C42 SING N N 37 VOV C42 C41 DOUB N N 38 VOV N04 C29 SING Y N 39 VOV N04 C32 SING Y N 40 VOV C29 C30 DOUB Y N 41 VOV C40 C41 SING N N 42 VOV C40 C39 DOUB N N 43 VOV C41 C44 SING N N 44 VOV C32 C39 SING N N 45 VOV C32 C31 DOUB Y N 46 VOV C30 C34 SING N N 47 VOV C30 C31 SING Y N 48 VOV O37 C36 DOUB N N 49 VOV C34 C35 SING N N 50 VOV O38 C36 SING N N 51 VOV C36 C35 SING N N 52 VOV C31 C33 SING N N 53 VOV C06 H061 SING N N 54 VOV C11 H112 SING N N 55 VOV C11 H111 SING N N 56 VOV C11 H113 SING N N 57 VOV C12 H122 SING N N 58 VOV C12 H121 SING N N 59 VOV C13 H132 SING N N 60 VOV C13 H131 SING N N 61 VOV C17 H171 SING N N 62 VOV C22 H222 SING N N 63 VOV C22 H223 SING N N 64 VOV C22 H221 SING N N 65 VOV C23 H232 SING N N 66 VOV C23 H231 SING N N 67 VOV C24 H242 SING N N 68 VOV C24 H241 SING N N 69 VOV C28 H281 SING N N 70 VOV C33 H331 SING N N 71 VOV C33 H332 SING N N 72 VOV C33 H333 SING N N 73 VOV C34 H341 SING N N 74 VOV C34 H342 SING N N 75 VOV C35 H352 SING N N 76 VOV C35 H351 SING N N 77 VOV C39 H391 SING N N 78 VOV C44 H441 SING N N 79 VOV C44 H442 SING N N 80 VOV C44 H443 SING N N 81 VOV C45 H451 SING N N 82 VOV C46 H462 SING N N 83 VOV C46 H461 SING N N 84 VOV O15 H1 SING N N 85 VOV O26 H2 SING N N 86 VOV O38 H3 SING N N 87 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VOV InChI InChI 1.03 "InChI=1S/C35H36N4O6.Fe/c1-6-21-17(2)25-13-26-18(3)23(8-11-34(42)43)31(37-26)16-32-24(9-12-35(44)45)20(5)28(39-32)15-30-22(7-10-33(40)41)19(4)27(38-30)14-29(21)36-25;/h6,13-16H,1,7-12H2,2-5H3,(H5,36,37,38,39,40,41,42,43,44,45);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;" VOV InChIKey InChI 1.03 WHUQBNXBFVNCIJ-RGGAHWMASA-L VOV SMILES_CANONICAL CACTVS 3.385 "CC1=C(CCC(O)=O)C2=Cc3n4[Fe][N@]5C(=CC6=NC(=Cc4c(C)c3CCC(O)=O)C(=C6C=C)C)C(=C(CCC(O)=O)C5=CC1=N2)C" VOV SMILES CACTVS 3.385 "CC1=C(CCC(O)=O)C2=Cc3n4[Fe][N]5C(=CC6=NC(=Cc4c(C)c3CCC(O)=O)C(=C6C=C)C)C(=C(CCC(O)=O)C5=CC1=N2)C" VOV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)CCC(=O)O)C(=C(C7=C2)C)C=C)C)CCC(=O)O" VOV SMILES "OpenEye OEToolkits" 2.0.6 "Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)CCC(=O)O)C(=C(C7=C2)C)C=C)C)CCC(=O)O" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VOV "Create component" 2018-03-12 RCSB VOV "Initial release" 2019-07-10 RCSB ##