data_VOX # _chem_comp.id VOX _chem_comp.name "~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-7-[4-[2-(4-methylphenyl)hydrazinyl]phenyl]heptanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H52 N6 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-22 _chem_comp.pdbx_modified_date 2023-12-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 652.824 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VOX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OI1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VOX C4 C1 C 0 1 N N N N N N 56.850 -134.608 34.556 -1.158 1.840 -0.168 C4 VOX 1 VOX C5 C2 C 0 1 N N N N N N 55.759 -133.820 33.897 -2.506 1.116 -0.137 C5 VOX 2 VOX C6 C3 C 0 1 N N N N N N 54.767 -133.473 34.982 -3.616 2.088 -0.543 C6 VOX 3 VOX C7 C4 C 0 1 N N N N N N 53.360 -133.594 34.436 -4.964 1.364 -0.512 C7 VOX 4 VOX C8 C5 C 0 1 N N N N N N 52.896 -132.262 33.881 -6.074 2.336 -0.918 C8 VOX 5 VOX C10 C6 C 0 1 Y N N N N N 50.737 -132.152 32.847 -8.152 1.613 0.274 C10 VOX 6 VOX C13 C7 C 0 1 Y N N N N N 51.768 -133.630 30.765 -9.076 0.317 -1.992 C13 VOX 7 VOX C17 C8 C 0 1 Y N N N N N 46.620 -133.585 28.272 -13.802 -1.060 1.577 C17 VOX 8 VOX C20 C9 C 0 1 N N N N N N 46.138 -135.560 25.215 -16.784 -3.116 0.516 C20 VOX 9 VOX C22 C10 C 0 1 Y N N N N N 47.915 -135.559 26.792 -14.715 -2.377 -0.682 C22 VOX 10 VOX C24 C11 C 0 1 Y N N N N N 52.584 -133.299 31.818 -7.866 0.981 -2.020 C24 VOX 11 VOX C26 C12 C 0 1 N N S N N N 61.555 -134.903 35.449 3.698 1.611 0.501 C26 VOX 12 VOX C36 C13 C 0 1 N N N N N N 63.055 -136.922 43.161 9.867 -2.677 2.064 C36 VOX 13 VOX C34 C14 C 0 1 N N S N N N 63.293 -136.177 41.916 8.805 -1.607 2.324 C34 VOX 14 VOX C35 C15 C 0 1 N N N N N N 63.595 -134.759 42.305 7.961 -2.001 3.537 C35 VOX 15 VOX N33 N1 N 0 1 N N N N N N 62.120 -136.172 41.068 7.936 -1.509 1.119 N33 VOX 16 VOX C31 C16 C 0 1 N N N N N N 62.305 -136.289 39.716 7.844 -0.232 0.618 C31 VOX 17 VOX O32 O1 O 0 1 N N N N N N 63.450 -136.424 39.301 8.436 0.688 1.141 O32 VOX 18 VOX C37 C17 C 0 1 N N N N N N 62.670 -138.321 42.831 11.013 -2.070 1.252 C37 VOX 19 VOX C38 C18 C 0 1 N N N N N N 61.312 -138.512 42.854 10.626 -2.020 -0.204 C38 VOX 20 VOX O39 O2 O 0 1 N N N N N N 60.647 -138.316 43.858 9.584 -2.511 -0.584 O39 VOX 21 VOX N40 N2 N 0 1 N N N N N N 60.739 -139.010 41.710 11.471 -1.410 -1.087 N40 VOX 22 VOX C41 C19 C 0 1 N N N N N N 59.312 -139.219 41.621 11.016 -1.403 -2.497 C41 VOX 23 VOX C42 C20 C 0 1 N N N N N N 58.876 -138.900 40.228 10.054 -0.229 -2.694 C42 VOX 24 VOX C43 C21 C 0 1 N N S N N N 59.272 -137.528 39.830 8.630 -0.676 -2.359 C43 VOX 25 VOX O44 O3 O 0 1 N N N N N N 58.232 -137.031 39.045 7.975 -1.112 -3.552 O44 VOX 26 VOX C45 C22 C 0 1 N N N N N N 60.491 -137.599 38.977 7.857 0.497 -1.753 C45 VOX 27 VOX C30 C23 C 0 1 N N S N N N 61.188 -136.273 38.897 6.985 -0.007 -0.601 C30 VOX 28 VOX N29 N3 N 0 1 N N N N N N 61.565 -136.056 37.513 5.955 0.989 -0.295 N29 VOX 29 VOX C27 C24 C 0 1 N N N N N N 61.135 -135.010 36.866 4.802 0.608 0.288 C27 VOX 30 VOX O28 O4 O 0 1 N N N N N N 60.408 -134.179 37.354 4.652 -0.543 0.642 O28 VOX 31 VOX C46 C25 C 0 1 N N R N N N 62.563 -133.843 35.445 3.918 2.337 1.830 C46 VOX 32 VOX C48 C26 C 0 1 N N N N N N 63.634 -134.328 36.364 5.192 3.180 1.746 C48 VOX 33 VOX O47 O5 O 0 1 N N N N N N 63.073 -133.779 34.156 2.801 3.187 2.099 O47 VOX 34 VOX N25 N4 N 0 1 N N N N N N 60.439 -134.452 34.644 2.407 0.918 0.531 N25 VOX 35 VOX C1 C27 C 0 1 N N N N N N 59.232 -134.981 34.757 1.279 1.581 0.208 C1 VOX 36 VOX O2 O6 O 0 1 N N N N N N 58.938 -135.853 35.555 1.332 2.750 -0.108 O2 VOX 37 VOX C3 C28 C 0 1 N N N N N N 58.174 -134.407 33.851 -0.048 0.868 0.238 C3 VOX 38 VOX C9 C29 C 0 1 Y N N N N N 52.061 -132.558 32.847 -7.401 1.623 -0.887 C9 VOX 39 VOX C11 C30 C 0 1 Y N N N N N 49.918 -132.484 31.786 -9.366 0.956 0.307 C11 VOX 40 VOX C12 C31 C 0 1 Y N N N N N 50.454 -133.224 30.754 -9.833 0.305 -0.828 C12 VOX 41 VOX N14 N5 N 0 1 N N N N N N 49.749 -133.585 29.713 -11.058 -0.366 -0.796 N14 VOX 42 VOX N15 N6 N 0 1 N N N N N N 48.417 -133.638 29.793 -11.820 -0.377 0.380 N15 VOX 43 VOX C16 C32 C 0 1 Y N N N N N 47.839 -134.078 28.689 -13.045 -1.048 0.412 C16 VOX 44 VOX C18 C33 C 0 1 Y N N N N N 46.056 -134.085 27.108 -15.009 -1.729 1.607 C18 VOX 45 VOX C19 C34 C 0 1 Y N N N N N 46.702 -135.065 26.373 -15.465 -2.387 0.479 C19 VOX 46 VOX C23 C35 C 0 1 Y N N N N N 48.475 -135.062 27.948 -13.509 -1.705 -0.721 C23 VOX 47 VOX H1 H1 H 0 1 N N N N N N 56.588 -135.676 34.529 -0.967 2.209 -1.176 H1 VOX 48 VOX H2 H2 H 0 1 N N N N N N 56.947 -134.281 35.602 -1.180 2.678 0.528 H2 VOX 49 VOX H3 H3 H 0 1 N N N N N N 56.169 -132.903 33.450 -2.484 0.277 -0.833 H3 VOX 50 VOX H4 H4 H 0 1 N N N N N N 55.273 -134.423 33.116 -2.697 0.747 0.871 H4 VOX 51 VOX H5 H5 H 0 1 N N N N N N 54.893 -134.164 35.829 -3.638 2.926 0.153 H5 VOX 52 VOX H6 H6 H 0 1 N N N N N N 54.941 -132.441 35.322 -3.425 2.457 -1.551 H6 VOX 53 VOX H7 H7 H 0 1 N N N N N N 52.682 -133.906 35.244 -4.942 0.525 -1.208 H7 VOX 54 VOX H8 H8 H 0 1 N N N N N N 53.345 -134.347 33.634 -5.155 0.995 0.496 H8 VOX 55 VOX H9 H9 H 0 1 N N N N N N 53.756 -131.677 33.523 -6.095 3.174 -0.222 H9 VOX 56 VOX H10 H10 H 0 1 N N N N N N 52.360 -131.691 34.654 -5.883 2.704 -1.926 H10 VOX 57 VOX H11 H11 H 0 1 N N N N N N 50.346 -131.578 33.674 -7.786 2.115 1.157 H11 VOX 58 VOX H12 H12 H 0 1 N N N N N N 52.159 -134.211 29.943 -9.439 -0.185 -2.878 H12 VOX 59 VOX H13 H13 H 0 1 N N N N N N 46.113 -132.822 28.843 -13.444 -0.550 2.459 H13 VOX 60 VOX H14 H14 H 0 1 N N N N N N 45.501 -136.424 25.457 -16.620 -4.147 0.828 H14 VOX 61 VOX H15 H15 H 0 1 N N N N N N 45.529 -134.777 24.740 -17.452 -2.624 1.222 H15 VOX 62 VOX H16 H16 H 0 1 N N N N N N 46.935 -135.874 24.524 -17.233 -3.105 -0.478 H16 VOX 63 VOX H17 H17 H 0 1 N N N N N N 48.421 -136.325 26.223 -15.076 -2.888 -1.562 H17 VOX 64 VOX H18 H18 H 0 1 N N N N N N 53.616 -133.615 31.836 -7.281 0.998 -2.928 H18 VOX 65 VOX H19 H19 H 0 1 N N N N N N 61.967 -135.854 35.081 3.703 2.335 -0.313 H19 VOX 66 VOX H20 H20 H 0 1 N N N N N N 63.973 -136.927 43.768 10.251 -3.046 3.014 H20 VOX 67 VOX H21 H21 H 0 1 N N N N N N 62.244 -136.441 43.727 9.423 -3.501 1.506 H21 VOX 68 VOX H22 H22 H 0 1 N N N N N N 64.153 -136.604 41.379 9.287 -0.647 2.508 H22 VOX 69 VOX H23 H23 H 0 1 N N N N N N 64.485 -134.737 42.951 8.604 -2.092 4.413 H23 VOX 70 VOX H24 H24 H 0 1 N N N N N N 63.785 -134.163 41.400 7.206 -1.237 3.719 H24 VOX 71 VOX H25 H25 H 0 1 N N N N N N 62.737 -134.337 42.849 7.472 -2.957 3.345 H25 VOX 72 VOX H26 H26 H 0 1 N N N N N N 61.203 -136.086 41.457 7.482 -2.271 0.726 H26 VOX 73 VOX H27 H27 H 0 1 N N N N N N 63.134 -138.997 43.565 11.217 -1.061 1.608 H27 VOX 74 VOX H28 H28 H 0 1 N N N N N N 63.043 -138.561 41.824 11.906 -2.684 1.369 H28 VOX 75 VOX H29 H29 H 0 1 N N N N N N 61.319 -139.232 40.926 12.310 -1.009 -0.811 H29 VOX 76 VOX H30 H30 H 0 1 N N N N N N 58.795 -138.559 42.333 11.874 -1.288 -3.158 H30 VOX 77 VOX H31 H31 H 0 1 N N N N N N 59.075 -140.268 41.854 10.505 -2.339 -2.721 H31 VOX 78 VOX H32 H32 H 0 1 N N N N N N 57.781 -138.986 40.169 10.342 0.591 -2.036 H32 VOX 79 VOX H33 H33 H 0 1 N N N N N N 59.339 -139.619 39.536 10.096 0.105 -3.731 H33 VOX 80 VOX H34 H34 H 0 1 N N N N N N 59.456 -136.903 40.717 8.665 -1.497 -1.643 H34 VOX 81 VOX H35 H35 H 0 1 N N N N N N 57.440 -136.975 39.566 8.411 -1.855 -3.991 H35 VOX 82 VOX H36 H36 H 0 1 N N N N N N 60.199 -137.911 37.963 8.560 1.241 -1.378 H36 VOX 83 VOX H37 H37 H 0 1 N N N N N N 61.182 -138.340 39.404 7.224 0.949 -2.516 H37 VOX 84 VOX H38 H38 H 0 1 N N N N N N 60.489 -135.485 39.215 6.510 -0.945 -0.888 H38 VOX 85 VOX H39 H39 H 0 1 N N N N N N 62.160 -136.715 37.052 6.103 1.922 -0.513 H39 VOX 86 VOX H40 H40 H 0 1 N N N N N N 62.147 -132.885 35.789 4.018 1.605 2.632 H40 VOX 87 VOX H41 H41 H 0 1 N N N N N N 63.241 -134.383 37.390 5.131 3.845 0.885 H41 VOX 88 VOX H42 H42 H 0 1 N N N N N N 63.966 -135.327 36.045 5.297 3.771 2.655 H42 VOX 89 VOX H43 H43 H 0 1 N N N N N N 64.485 -133.632 36.335 6.055 2.523 1.637 H43 VOX 90 VOX H44 H44 H 0 1 N N N N N N 63.735 -133.099 34.110 1.957 2.719 2.166 H44 VOX 91 VOX H45 H45 H 0 1 N N N N N N 60.586 -133.717 33.982 2.365 -0.018 0.784 H45 VOX 92 VOX H46 H46 H 0 1 N N N N N N 58.174 -134.934 32.885 -0.240 0.499 1.246 H46 VOX 93 VOX H47 H47 H 0 1 N N N N N N 58.357 -133.335 33.684 -0.027 0.030 -0.458 H47 VOX 94 VOX H48 H48 H 0 1 N N N N N N 48.884 -132.172 31.765 -9.952 0.948 1.214 H48 VOX 95 VOX H49 H49 H 0 1 N N N N N N 50.059 -134.501 29.458 -11.381 -0.824 -1.587 H49 VOX 96 VOX H50 H50 H 0 1 N N N N N N 48.075 -132.718 29.984 -11.497 0.081 1.172 H50 VOX 97 VOX H51 H51 H 0 1 N N N N N N 45.103 -133.706 26.771 -15.598 -1.739 2.512 H51 VOX 98 VOX H52 H52 H 0 1 N N N N N N 49.427 -135.446 28.283 -12.922 -1.697 -1.628 H52 VOX 99 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VOX C20 C19 SING N N 1 VOX C19 C22 DOUB Y N 2 VOX C19 C18 SING Y N 3 VOX C22 C23 SING Y N 4 VOX C18 C17 DOUB Y N 5 VOX C23 C16 DOUB Y N 6 VOX C17 C16 SING Y N 7 VOX C16 N15 SING N N 8 VOX N14 N15 SING N N 9 VOX N14 C12 SING N N 10 VOX C12 C13 DOUB Y N 11 VOX C12 C11 SING Y N 12 VOX C13 C24 SING Y N 13 VOX C11 C10 DOUB Y N 14 VOX C24 C9 DOUB Y N 15 VOX C10 C9 SING Y N 16 VOX C9 C8 SING N N 17 VOX C3 C4 SING N N 18 VOX C3 C1 SING N N 19 VOX C8 C7 SING N N 20 VOX C5 C4 SING N N 21 VOX C5 C6 SING N N 22 VOX O47 C46 SING N N 23 VOX C7 C6 SING N N 24 VOX N25 C1 SING N N 25 VOX N25 C26 SING N N 26 VOX C1 O2 DOUB N N 27 VOX C46 C26 SING N N 28 VOX C46 C48 SING N N 29 VOX C26 C27 SING N N 30 VOX C27 O28 DOUB N N 31 VOX C27 N29 SING N N 32 VOX N29 C30 SING N N 33 VOX C30 C45 SING N N 34 VOX C30 C31 SING N N 35 VOX C45 C43 SING N N 36 VOX O44 C43 SING N N 37 VOX O32 C31 DOUB N N 38 VOX C31 N33 SING N N 39 VOX C43 C42 SING N N 40 VOX C42 C41 SING N N 41 VOX N33 C34 SING N N 42 VOX C41 N40 SING N N 43 VOX N40 C38 SING N N 44 VOX C34 C35 SING N N 45 VOX C34 C36 SING N N 46 VOX C37 C38 SING N N 47 VOX C37 C36 SING N N 48 VOX C38 O39 DOUB N N 49 VOX C4 H1 SING N N 50 VOX C4 H2 SING N N 51 VOX C5 H3 SING N N 52 VOX C5 H4 SING N N 53 VOX C6 H5 SING N N 54 VOX C6 H6 SING N N 55 VOX C7 H7 SING N N 56 VOX C7 H8 SING N N 57 VOX C8 H9 SING N N 58 VOX C8 H10 SING N N 59 VOX C10 H11 SING N N 60 VOX C13 H12 SING N N 61 VOX C17 H13 SING N N 62 VOX C20 H14 SING N N 63 VOX C20 H15 SING N N 64 VOX C20 H16 SING N N 65 VOX C22 H17 SING N N 66 VOX C24 H18 SING N N 67 VOX C26 H19 SING N N 68 VOX C36 H20 SING N N 69 VOX C36 H21 SING N N 70 VOX C34 H22 SING N N 71 VOX C35 H23 SING N N 72 VOX C35 H24 SING N N 73 VOX C35 H25 SING N N 74 VOX N33 H26 SING N N 75 VOX C37 H27 SING N N 76 VOX C37 H28 SING N N 77 VOX N40 H29 SING N N 78 VOX C41 H30 SING N N 79 VOX C41 H31 SING N N 80 VOX C42 H32 SING N N 81 VOX C42 H33 SING N N 82 VOX C43 H34 SING N N 83 VOX O44 H35 SING N N 84 VOX C45 H36 SING N N 85 VOX C45 H37 SING N N 86 VOX C30 H38 SING N N 87 VOX N29 H39 SING N N 88 VOX C46 H40 SING N N 89 VOX C48 H41 SING N N 90 VOX C48 H42 SING N N 91 VOX C48 H43 SING N N 92 VOX O47 H44 SING N N 93 VOX N25 H45 SING N N 94 VOX C3 H46 SING N N 95 VOX C3 H47 SING N N 96 VOX C11 H48 SING N N 97 VOX N14 H49 SING N N 98 VOX N15 H50 SING N N 99 VOX C18 H51 SING N N 100 VOX C23 H52 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VOX InChI InChI 1.06 "InChI=1S/C35H52N6O6/c1-23-10-15-27(16-11-23)40-41-28-17-13-26(14-18-28)8-6-4-5-7-9-32(45)39-33(25(3)42)35(47)38-30-22-29(43)20-21-36-31(44)19-12-24(2)37-34(30)46/h10-11,13-18,24-25,29-30,33,40-43H,4-9,12,19-22H2,1-3H3,(H,36,44)(H,37,46)(H,38,47)(H,39,45)/t24-,25+,29-,30-,33-/m0/s1" VOX InChIKey InChI 1.06 RLZPHOGHHZBJIN-RPQORNJFSA-N VOX SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H](NC(=O)CCCCCCc1ccc(NNc2ccc(C)cc2)cc1)C(=O)N[C@H]3C[C@@H](O)CCNC(=O)CC[C@H](C)NC3=O" VOX SMILES CACTVS 3.385 "C[CH](O)[CH](NC(=O)CCCCCCc1ccc(NNc2ccc(C)cc2)cc1)C(=O)N[CH]3C[CH](O)CCNC(=O)CC[CH](C)NC3=O" VOX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)NNc2ccc(cc2)CCCCCCC(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H]3C[C@H](CCNC(=O)CC[C@@H](NC3=O)C)O" VOX SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)NNc2ccc(cc2)CCCCCCC(=O)NC(C(C)O)C(=O)NC3CC(CCNC(=O)CCC(NC3=O)C)O" # _pdbx_chem_comp_identifier.comp_id VOX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S},3~{R})-1-[[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]-7-[4-[2-(4-methylphenyl)hydrazinyl]phenyl]heptanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VOX "Create component" 2023-03-22 PDBE VOX "Initial release" 2023-12-27 RCSB #