data_VPE # _chem_comp.id VPE _chem_comp.name "(3S)-3-methyl-5-oxo-5-[(1,3-thiazol-2-yl)amino]pentanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H12 N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-02 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 228.268 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VPE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FNP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VPE N1 N1 N 0 1 Y N N -1.794 11.868 -34.630 3.886 -1.177 0.008 N1 VPE 1 VPE C7 C1 C 0 1 N N N -6.896 16.129 -33.121 -3.444 -0.893 -0.045 C7 VPE 2 VPE C8 C2 C 0 1 N N N -7.387 14.701 -32.694 -4.543 0.123 -0.222 C8 VPE 3 VPE O1 O1 O 0 1 N N N -7.217 13.772 -33.512 -4.273 1.298 -0.291 O1 VPE 4 VPE C1 C3 C 0 1 N N S -5.606 16.003 -33.930 -2.093 -0.178 0.017 C1 VPE 5 VPE C5 C4 C 0 1 Y N N -0.817 11.613 -35.593 4.956 -0.406 -0.056 C5 VPE 6 VPE C6 C5 C 0 1 Y N N -0.075 12.686 -35.970 4.695 0.900 -0.138 C6 VPE 7 VPE C4 C6 C 0 1 Y N N -1.746 13.171 -34.310 2.734 -0.584 -0.017 C4 VPE 8 VPE C3 C7 C 0 1 N N N -3.245 14.992 -33.842 0.364 -0.513 0.008 C3 VPE 9 VPE C2 C8 C 0 1 N N N -4.478 15.415 -33.087 -0.969 -1.214 0.071 C2 VPE 10 VPE O2 O2 O 0 1 N N N -7.920 14.604 -31.548 -5.821 -0.279 -0.303 O2 VPE 11 VPE C C9 C 0 1 N N N -5.162 17.383 -34.416 -2.038 0.700 1.269 C VPE 12 VPE O O3 O 0 1 N N N -2.821 15.632 -34.777 0.410 0.696 -0.072 O VPE 13 VPE N N2 N 0 1 N N N -2.579 13.821 -33.432 1.504 -1.230 0.041 N VPE 14 VPE S S1 S 0 1 Y N N -0.512 14.127 -35.170 2.946 1.109 -0.130 S VPE 15 VPE H1 H1 H 0 1 N N N -6.708 16.736 -32.223 -3.605 -1.446 0.880 H1 VPE 16 VPE H2 H2 H 0 1 N N N -7.669 16.614 -33.736 -3.450 -1.585 -0.887 H2 VPE 17 VPE H3 H3 H 0 1 N N N -5.786 15.353 -34.799 -1.971 0.445 -0.869 H3 VPE 18 VPE H4 H4 H 0 1 N N N -0.661 10.629 -36.010 5.961 -0.801 -0.042 H4 VPE 19 VPE H5 H5 H 0 1 N N N 0.715 12.632 -36.705 5.428 1.691 -0.199 H5 VPE 20 VPE H6 H6 H 0 1 N N N -4.178 16.174 -32.349 -1.039 -1.778 1.001 H6 VPE 21 VPE H7 H7 H 0 1 N N N -4.873 14.531 -32.564 -1.062 -1.895 -0.775 H7 VPE 22 VPE H8 H8 H 0 1 N N N -8.179 13.703 -31.394 -6.491 0.409 -0.416 H8 VPE 23 VPE H9 H9 H 0 1 N N N -4.233 17.286 -34.998 -1.076 1.210 1.313 H9 VPE 24 VPE H10 H10 H 0 1 N N N -5.948 17.819 -35.050 -2.839 1.439 1.230 H10 VPE 25 VPE H11 H11 H 0 1 N N N -4.985 18.037 -33.550 -2.160 0.078 2.155 H11 VPE 26 VPE H12 H12 H 0 1 N N N -2.712 13.465 -32.507 1.467 -2.197 0.105 H12 VPE 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VPE C6 C5 DOUB Y N 1 VPE C6 S SING Y N 2 VPE C5 N1 SING Y N 3 VPE S C4 SING Y N 4 VPE O C3 DOUB N N 5 VPE N1 C4 DOUB Y N 6 VPE C C1 SING N N 7 VPE C4 N SING N N 8 VPE C1 C7 SING N N 9 VPE C1 C2 SING N N 10 VPE C3 N SING N N 11 VPE C3 C2 SING N N 12 VPE O1 C8 DOUB N N 13 VPE C7 C8 SING N N 14 VPE C8 O2 SING N N 15 VPE C7 H1 SING N N 16 VPE C7 H2 SING N N 17 VPE C1 H3 SING N N 18 VPE C5 H4 SING N N 19 VPE C6 H5 SING N N 20 VPE C2 H6 SING N N 21 VPE C2 H7 SING N N 22 VPE O2 H8 SING N N 23 VPE C H9 SING N N 24 VPE C H10 SING N N 25 VPE C H11 SING N N 26 VPE N H12 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VPE SMILES ACDLabs 12.01 "O=C(CC(C)CC(=O)O)Nc1nccs1" VPE InChI InChI 1.06 "InChI=1S/C9H12N2O3S/c1-6(5-8(13)14)4-7(12)11-9-10-2-3-15-9/h2-3,6H,4-5H2,1H3,(H,13,14)(H,10,11,12)/t6-/m0/s1" VPE InChIKey InChI 1.06 XBVSCWDDCLBNGM-LURJTMIESA-N VPE SMILES_CANONICAL CACTVS 3.385 "C[C@H](CC(O)=O)CC(=O)Nc1sccn1" VPE SMILES CACTVS 3.385 "C[CH](CC(O)=O)CC(=O)Nc1sccn1" VPE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CC(=O)Nc1nccs1)CC(=O)O" VPE SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC(=O)Nc1nccs1)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VPE "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-methyl-5-oxo-5-[(1,3-thiazol-2-yl)amino]pentanoic acid" VPE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-methyl-5-oxidanylidene-5-(1,3-thiazol-2-ylamino)pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VPE "Create component" 2022-09-02 RCSB VPE "Initial release" 2022-11-02 RCSB #