data_VPJ # _chem_comp.id VPJ _chem_comp.name "N~2~-(4-fluorophenyl)-6-{[(5-{[(oxolan-2-yl)methyl]amino}-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-1,3,5-triazine-2,4-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H19 F N8 O S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-01 _chem_comp.pdbx_modified_date 2021-07-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 434.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VPJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JYQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VPJ C10 C1 C 0 1 Y N N -12.083 11.239 22.789 -4.661 -0.264 -0.404 C10 VPJ 1 VPJ C17 C2 C 0 1 Y N N -14.084 15.795 19.636 6.705 0.169 0.810 C17 VPJ 2 VPJ C21 C3 C 0 1 Y N N -13.722 14.165 21.826 8.170 2.099 -0.534 C21 VPJ 3 VPJ C22 C4 C 0 1 Y N N -12.625 14.773 21.238 6.793 2.198 -0.477 C22 VPJ 4 VPJ C02 C5 C 0 1 Y N N -8.180 16.308 18.666 3.711 -2.101 0.122 C02 VPJ 5 VPJ C04 C6 C 0 1 Y N N -8.566 14.484 20.006 1.830 -0.820 0.443 C04 VPJ 6 VPJ C05 C7 C 0 1 N N N -8.000 13.259 20.721 0.338 -0.717 0.631 C05 VPJ 7 VPJ C07 C8 C 0 1 Y N N -10.345 11.556 20.968 -2.175 -0.446 -0.572 C07 VPJ 8 VPJ C14 C9 C 0 1 Y N N -10.303 15.861 19.442 3.888 0.187 0.266 C14 VPJ 9 VPJ C16 C10 C 0 1 Y N N -12.804 15.588 20.130 6.056 1.233 0.196 C16 VPJ 10 VPJ C18 C11 C 0 1 Y N N -15.178 15.185 20.220 8.081 0.074 0.750 C18 VPJ 11 VPJ C19 C12 C 0 1 Y N N -14.991 14.371 21.323 8.814 1.038 0.079 C19 VPJ 12 VPJ F20 F1 F 0 1 N N N -16.066 13.767 21.911 10.161 0.942 0.021 F20 VPJ 13 VPJ N01 N1 N 0 1 N N N -7.231 17.112 17.905 4.299 -3.340 -0.033 N01 VPJ 14 VPJ N03 N2 N 0 1 Y N N -7.741 15.234 19.298 2.394 -2.005 0.289 N03 VPJ 15 VPJ N08 N3 N 0 1 Y N N -11.582 11.316 20.549 -2.659 -0.481 0.630 N08 VPJ 16 VPJ N09 N4 N 0 1 Y N N -12.515 11.139 21.535 -4.030 -0.379 0.723 N09 VPJ 17 VPJ N11 N5 N 0 1 N N N -12.868 11.101 24.005 -6.038 -0.148 -0.547 N11 VPJ 18 VPJ N13 N6 N 0 1 Y N N -9.855 14.789 20.077 2.570 0.274 0.433 N13 VPJ 19 VPJ N15 N7 N 0 1 N N N -11.699 16.262 19.469 4.661 1.331 0.255 N15 VPJ 20 VPJ N23 N8 N 0 1 Y N N -9.463 16.622 18.746 4.459 -1.003 0.111 N23 VPJ 21 VPJ S06 S1 S 0 1 N N N -8.846 11.831 19.986 -0.465 -0.553 -0.987 S06 VPJ 22 VPJ S12 S2 S 0 1 Y N N -10.385 11.580 22.690 -3.495 -0.272 -1.723 S12 VPJ 23 VPJ H1 H1 H 0 1 N N N -14.227 16.442 18.783 6.133 -0.580 1.337 H1 VPJ 24 VPJ H2 H2 H 0 1 N N N -13.583 13.525 22.685 8.743 2.850 -1.057 H2 VPJ 25 VPJ H3 H3 H 0 1 N N N -11.635 14.613 21.640 6.291 3.026 -0.954 H3 VPJ 26 VPJ H4 H4 H 0 1 N N N -8.207 13.314 21.800 -0.029 -1.614 1.130 H4 VPJ 27 VPJ H5 H5 H 0 1 N N N -6.914 13.187 20.559 0.109 0.157 1.241 H5 VPJ 28 VPJ H6 H6 H 0 1 N N N -16.169 15.342 19.820 8.586 -0.753 1.228 H6 VPJ 29 VPJ H7 H7 H 0 1 N N N -7.708 17.887 17.489 5.260 -3.409 -0.150 H7 VPJ 30 VPJ H8 H8 H 0 1 N N N -6.515 17.450 18.516 3.753 -4.141 -0.024 H8 VPJ 31 VPJ H9 H9 H 0 1 N N N -12.475 11.055 24.923 -6.429 -0.066 -1.431 H9 VPJ 32 VPJ H11 H11 H 0 1 N N N -11.927 17.101 18.974 4.237 2.203 0.288 H11 VPJ 33 VPJ C1 C13 C 0 1 N N N ? ? ? -6.901 -0.149 0.637 C1 VPJ 34 VPJ C2 C14 C 0 1 N N N ? ? ? -8.361 -0.009 0.205 C2 VPJ 35 VPJ C3 C15 C 0 1 N N N ? ? ? -9.277 -0.009 1.444 C3 VPJ 36 VPJ C4 C16 C 0 1 N N N ? ? ? -10.030 1.341 1.360 C4 VPJ 37 VPJ C5 C17 C 0 1 N N N ? ? ? -9.884 1.701 -0.141 C5 VPJ 38 VPJ O1 O1 O 0 1 N N N ? ? ? -8.554 1.246 -0.469 O1 VPJ 39 VPJ H10 H10 H 0 1 N N N ? ? ? -6.771 -1.085 1.180 H10 VPJ 40 VPJ H12 H12 H 0 1 N N N ? ? ? -6.632 0.686 1.283 H12 VPJ 41 VPJ H13 H13 H 0 1 N N N ? ? ? -8.632 -0.832 -0.457 H13 VPJ 42 VPJ H14 H14 H 0 1 N N N ? ? ? -9.980 -0.841 1.398 H14 VPJ 43 VPJ H15 H15 H 0 1 N N N ? ? ? -8.684 -0.060 2.357 H15 VPJ 44 VPJ H16 H16 H 0 1 N N N ? ? ? -11.079 1.219 1.631 H16 VPJ 45 VPJ H17 H17 H 0 1 N N N ? ? ? -9.552 2.092 1.988 H17 VPJ 46 VPJ H18 H18 H 0 1 N N N ? ? ? -10.628 1.172 -0.736 H18 VPJ 47 VPJ H19 H19 H 0 1 N N N ? ? ? -9.969 2.778 -0.287 H19 VPJ 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VPJ N01 C02 SING N N 1 VPJ C02 N23 DOUB Y N 2 VPJ C02 N03 SING Y N 3 VPJ N23 C14 SING Y N 4 VPJ N03 C04 DOUB Y N 5 VPJ C14 N15 SING N N 6 VPJ C14 N13 DOUB Y N 7 VPJ N15 C16 SING N N 8 VPJ C17 C16 DOUB Y N 9 VPJ C17 C18 SING Y N 10 VPJ S06 C05 SING N N 11 VPJ S06 C07 SING N N 12 VPJ C04 N13 SING Y N 13 VPJ C04 C05 SING N N 14 VPJ C16 C22 SING Y N 15 VPJ C18 C19 DOUB Y N 16 VPJ N08 C07 DOUB Y N 17 VPJ N08 N09 SING Y N 18 VPJ C07 S12 SING Y N 19 VPJ C22 C21 DOUB Y N 20 VPJ C19 C21 SING Y N 21 VPJ C19 F20 SING N N 22 VPJ N09 C10 DOUB Y N 23 VPJ S12 C10 SING Y N 24 VPJ C10 N11 SING N N 25 VPJ C17 H1 SING N N 26 VPJ C21 H2 SING N N 27 VPJ C22 H3 SING N N 28 VPJ C05 H4 SING N N 29 VPJ C05 H5 SING N N 30 VPJ C18 H6 SING N N 31 VPJ N01 H7 SING N N 32 VPJ N01 H8 SING N N 33 VPJ N11 H9 SING N N 34 VPJ N15 H11 SING N N 35 VPJ N11 C1 SING N N 36 VPJ C1 C2 SING N N 37 VPJ C2 C3 SING N N 38 VPJ C3 C4 SING N N 39 VPJ C4 C5 SING N N 40 VPJ C5 O1 SING N N 41 VPJ O1 C2 SING N N 42 VPJ C1 H10 SING N N 43 VPJ C1 H12 SING N N 44 VPJ C2 H13 SING N N 45 VPJ C3 H14 SING N N 46 VPJ C3 H15 SING N N 47 VPJ C4 H16 SING N N 48 VPJ C4 H17 SING N N 49 VPJ C5 H18 SING N N 50 VPJ C5 H19 SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VPJ SMILES ACDLabs 12.01 "c2(NCC1CCCO1)nnc(s2)SCc4nc(Nc3ccc(cc3)F)nc(n4)N" VPJ InChI InChI 1.03 "InChI=1S/C17H19FN8OS2/c18-10-3-5-11(6-4-10)21-15-23-13(22-14(19)24-15)9-28-17-26-25-16(29-17)20-8-12-2-1-7-27-12/h3-6,12H,1-2,7-9H2,(H,20,25)(H3,19,21,22,23,24)" VPJ InChIKey InChI 1.03 YMCUEXLWILKXTO-UHFFFAOYSA-N VPJ SMILES_CANONICAL CACTVS 3.385 "Nc1nc(CSc2sc(NCC3CCCO3)nn2)nc(Nc4ccc(F)cc4)n1" VPJ SMILES CACTVS 3.385 "Nc1nc(CSc2sc(NCC3CCCO3)nn2)nc(Nc4ccc(F)cc4)n1" VPJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Nc2nc(nc(n2)N)CSc3nnc(s3)NCC4CCCO4)F" VPJ SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Nc2nc(nc(n2)N)CSc3nnc(s3)NCC4CCCO4)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VPJ "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-(4-fluorophenyl)-6-{[(5-{[(oxolan-2-yl)methyl]amino}-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-1,3,5-triazine-2,4-diamine" VPJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}2-(4-fluorophenyl)-6-[[5-(oxolan-2-ylmethylamino)-1,3,4-thiadiazol-2-yl]sulfanylmethyl]-1,3,5-triazine-2,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VPJ "Create component" 2020-09-01 RCSB VPJ "Initial release" 2021-07-14 RCSB ##