data_VQ0 # _chem_comp.id VQ0 _chem_comp.name "3-chloro-5-{4-chloro-2-[2-(5-chloro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H12 Cl3 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-15 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 452.675 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VQ0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8U69 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VQ0 C12 C1 C 0 1 Y N N N N N 460.239 2.712 119.044 0.001 1.761 -0.403 C12 VQ0 1 VQ0 N2 N1 N 0 1 N N N N N N 458.276 -0.534 120.286 -3.562 -0.166 -1.304 N2 VQ0 2 VQ0 C11 C2 C 0 1 Y N N N N N 460.074 3.164 117.753 -0.192 3.069 0.013 C11 VQ0 3 VQ0 C10 C3 C 0 1 Y N N N N N 461.000 4.042 117.229 0.803 3.725 0.715 C10 VQ0 4 VQ0 C9 C4 C 0 1 Y N N N N N 462.066 4.491 117.973 1.992 3.078 1.003 C9 VQ0 5 VQ0 C8 C5 C 0 1 Y N N N N N 462.203 4.073 119.281 2.190 1.773 0.591 C8 VQ0 6 VQ0 C1 C6 C 0 1 N N N N N N 462.739 3.409 125.702 4.052 -2.797 2.543 C1 VQ0 7 VQ0 C2 C7 C 0 1 Y N N N N N 462.121 3.892 124.493 3.909 -2.079 1.312 C2 VQ0 8 VQ0 N1 N2 N 0 1 N N N N N N 463.184 3.012 126.678 4.165 -3.367 3.519 N1 VQ0 9 VQ0 C3 C8 C 0 1 Y N N N N N 461.653 5.204 124.424 4.984 -1.988 0.425 C3 VQ0 10 VQ0 C7 C9 C 0 1 Y N N N N N 461.330 3.148 119.794 1.194 1.109 -0.108 C7 VQ0 11 VQ0 O4 O1 O 0 1 N N N N N N 457.963 -1.578 118.279 -1.873 -1.392 -2.042 O4 VQ0 12 VQ0 C4 C10 C 0 1 Y N N N N N 461.074 5.640 123.246 4.843 -1.295 -0.760 C4 VQ0 13 VQ0 C5 C11 C 0 1 Y N N N N N 460.992 4.833 122.131 3.639 -0.689 -1.073 C5 VQ0 14 VQ0 C6 C12 C 0 1 Y N N N N N 461.450 3.529 122.212 2.565 -0.774 -0.197 C6 VQ0 15 VQ0 O3 O2 O 0 1 N N N N N N 460.638 -3.594 121.320 -4.607 -3.231 0.934 O3 VQ0 16 VQ0 O2 O3 O 0 1 N N N N N N 459.364 1.861 119.656 -0.976 1.115 -1.094 O2 VQ0 17 VQ0 O1 O4 O 0 1 N N N N N N 461.379 2.682 121.109 1.385 -0.177 -0.509 O1 VQ0 18 VQ0 N3 N3 N 0 1 N N N N N N 459.300 -2.574 119.818 -3.205 -2.358 -0.560 N3 VQ0 19 VQ0 C13 C13 C 0 1 N N N N N N 458.163 1.524 118.958 -2.174 1.847 -1.362 C13 VQ0 20 VQ0 C18 C14 C 0 1 N N N N N N 458.480 -1.562 119.384 -2.851 -1.308 -1.324 C18 VQ0 21 VQ0 C17 C15 C 0 1 N N N N N N 459.916 -2.617 121.049 -4.286 -2.281 0.243 C17 VQ0 22 VQ0 C16 C16 C 0 1 N N N N N N 459.678 -1.553 121.913 -5.045 -1.085 0.274 C16 VQ0 23 VQ0 C15 C17 C 0 1 N N N N N N 458.868 -0.526 121.516 -4.667 -0.047 -0.503 C15 VQ0 24 VQ0 C14 C18 C 0 1 N N N N N N 457.416 0.583 119.866 -3.149 0.962 -2.142 C14 VQ0 25 VQ0 C19 C19 C 0 1 Y N N N N N 462.040 3.068 123.374 2.694 -1.472 0.993 C19 VQ0 26 VQ0 CL1 CL1 CL 0 0 N N N N N N 460.450 7.259 123.118 6.180 -1.184 -1.862 CL1 VQ0 27 VQ0 CL2 CL2 CL 0 0 N N N N N N 460.809 4.593 115.590 0.560 5.363 1.236 CL2 VQ0 28 VQ0 CL3 CL3 CL 0 0 N N N N N N 460.428 -1.565 123.473 -6.442 -0.956 1.296 CL3 VQ0 29 VQ0 H1 H1 H 0 1 N N N N N N 459.233 2.836 117.160 -1.119 3.576 -0.212 H1 VQ0 30 VQ0 H2 H2 H 0 1 N N N N N N 462.789 5.165 117.538 2.766 3.593 1.552 H2 VQ0 31 VQ0 H3 H3 H 0 1 N N N N N N 462.994 4.473 119.898 3.118 1.271 0.817 H3 VQ0 32 VQ0 H4 H4 H 0 1 N N N N N N 461.741 5.866 125.273 5.925 -2.460 0.667 H4 VQ0 33 VQ0 H5 H5 H 0 1 N N N N N N 460.577 5.212 121.209 3.536 -0.144 -2.000 H5 VQ0 34 VQ0 H6 H6 H 0 1 N N N N N N 459.462 -3.338 119.193 -2.681 -3.173 -0.587 H6 VQ0 35 VQ0 H7 H7 H 0 1 N N N N N N 457.565 2.427 118.765 -2.632 2.150 -0.420 H7 VQ0 36 VQ0 H8 H8 H 0 1 N N N N N N 458.399 1.030 118.004 -1.935 2.732 -1.951 H8 VQ0 37 VQ0 H9 H9 H 0 1 N N N N N N 458.694 0.304 122.185 -5.233 0.873 -0.492 H9 VQ0 38 VQ0 H10 H10 H 0 1 N N N N N N 457.080 1.133 120.757 -2.659 0.586 -3.040 H10 VQ0 39 VQ0 H11 H11 H 0 1 N N N N N N 456.542 0.183 119.330 -4.025 1.546 -2.423 H11 VQ0 40 VQ0 H12 H12 H 0 1 N N N N N N 462.439 2.065 123.414 1.860 -1.538 1.675 H12 VQ0 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VQ0 CL2 C10 SING N N 1 VQ0 C10 C11 DOUB Y N 2 VQ0 C10 C9 SING Y N 3 VQ0 C11 C12 SING Y N 4 VQ0 C9 C8 DOUB Y N 5 VQ0 O4 C18 DOUB N N 6 VQ0 C13 O2 SING N N 7 VQ0 C13 C14 SING N N 8 VQ0 C12 O2 SING N N 9 VQ0 C12 C7 DOUB Y N 10 VQ0 C8 C7 SING Y N 11 VQ0 C18 N3 SING N N 12 VQ0 C18 N2 SING N N 13 VQ0 C7 O1 SING N N 14 VQ0 N3 C17 SING N N 15 VQ0 C14 N2 SING N N 16 VQ0 N2 C15 SING N N 17 VQ0 C17 O3 DOUB N N 18 VQ0 C17 C16 SING N N 19 VQ0 O1 C6 SING N N 20 VQ0 C15 C16 DOUB N N 21 VQ0 C16 CL3 SING N N 22 VQ0 C5 C6 DOUB Y N 23 VQ0 C5 C4 SING Y N 24 VQ0 C6 C19 SING Y N 25 VQ0 CL1 C4 SING N N 26 VQ0 C4 C3 DOUB Y N 27 VQ0 C19 C2 DOUB Y N 28 VQ0 C3 C2 SING Y N 29 VQ0 C2 C1 SING N N 30 VQ0 C1 N1 TRIP N N 31 VQ0 C11 H1 SING N N 32 VQ0 C9 H2 SING N N 33 VQ0 C8 H3 SING N N 34 VQ0 C3 H4 SING N N 35 VQ0 C5 H5 SING N N 36 VQ0 N3 H6 SING N N 37 VQ0 C13 H7 SING N N 38 VQ0 C13 H8 SING N N 39 VQ0 C15 H9 SING N N 40 VQ0 C14 H10 SING N N 41 VQ0 C14 H11 SING N N 42 VQ0 C19 H12 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VQ0 SMILES ACDLabs 12.01 "N#Cc1cc(cc(Cl)c1)Oc1ccc(Cl)cc1OCCN1C=C(Cl)C(=O)NC1=O" VQ0 InChI InChI 1.06 "InChI=1S/C19H12Cl3N3O4/c20-12-1-2-16(29-14-6-11(9-23)5-13(21)7-14)17(8-12)28-4-3-25-10-15(22)18(26)24-19(25)27/h1-2,5-8,10H,3-4H2,(H,24,26,27)" VQ0 InChIKey InChI 1.06 MPBULEIWOAXAKX-UHFFFAOYSA-N VQ0 SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=C(Cl)C(=O)NC3=O)c1" VQ0 SMILES CACTVS 3.385 "Clc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=C(Cl)C(=O)NC3=O)c1" VQ0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)OCCN2C=C(C(=O)NC2=O)Cl)Oc3cc(cc(c3)Cl)C#N" VQ0 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)OCCN2C=C(C(=O)NC2=O)Cl)Oc3cc(cc(c3)Cl)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VQ0 "SYSTEMATIC NAME" ACDLabs 12.01 "3-chloro-5-{4-chloro-2-[2-(5-chloro-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}benzonitrile" VQ0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-chloranyl-5-[4-chloranyl-2-[2-[5-chloranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VQ0 "Create component" 2023-09-15 RCSB VQ0 "Initial release" 2023-11-08 RCSB #