data_VQA # _chem_comp.id VQA _chem_comp.name "10-[(3aR,6R,6aR)-6-hydroxy-3-phenyl-3a-(1-phenylethenyl)-1,3a,4,5,6,6a-hexahydropentalen-2-yl]decanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H40 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-08 _chem_comp.pdbx_modified_date 2022-02-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.658 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VQA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JYD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VQA C10 C1 C 0 1 Y N N 38.181 -7.732 -0.324 -5.589 0.963 3.705 C10 VQA 1 VQA C11 C2 C 0 1 Y N N 36.788 -8.327 -0.506 -5.503 1.974 2.764 C11 VQA 2 VQA C12 C3 C 0 1 Y N N 36.511 -9.046 -1.574 -5.311 1.666 1.433 C12 VQA 3 VQA C13 C4 C 0 1 N N N 37.813 -11.549 -3.882 -5.956 -0.612 -1.072 C13 VQA 4 VQA C14 C5 C 0 1 N N R 36.555 -8.074 -5.079 -3.371 1.862 -0.969 C14 VQA 5 VQA C15 C6 C 0 1 N N N 37.549 -6.843 -5.397 -2.425 1.894 0.254 C15 VQA 6 VQA C16 C7 C 0 1 N N N 38.672 -7.676 -6.048 -1.817 0.512 0.309 C16 VQA 7 VQA C17 C8 C 0 1 N N N 40.034 -6.991 -5.961 -0.578 0.153 1.089 C17 VQA 8 VQA C18 C9 C 0 1 N N N 40.404 -6.757 -4.498 0.662 0.461 0.247 C18 VQA 9 VQA C19 C10 C 0 1 N N N 41.356 -5.570 -4.405 1.919 0.097 1.038 C19 VQA 10 VQA C20 C11 C 0 1 N N N 41.158 -4.880 -3.056 3.159 0.405 0.196 C20 VQA 11 VQA C21 C12 C 0 1 N N N 42.345 -5.185 -2.151 4.417 0.041 0.987 C21 VQA 12 VQA C22 C13 C 0 1 N N N 42.630 -3.977 -1.261 5.656 0.349 0.145 C22 VQA 13 VQA C02 C14 C 0 1 N N R 35.503 -8.072 -6.088 -2.552 2.186 -2.231 C02 VQA 14 VQA C03 C15 C 0 1 N N N 35.751 -9.276 -7.037 -3.030 1.206 -3.313 C03 VQA 15 VQA C04 C16 C 0 1 N N N 36.765 -10.233 -6.342 -3.746 0.053 -2.596 C04 VQA 16 VQA C05 C17 C 0 1 N N R 37.362 -9.361 -5.189 -3.696 0.347 -1.065 C05 VQA 17 VQA C06 C18 C 0 1 N N N 37.249 -10.132 -3.869 -4.997 -0.003 -0.389 C06 VQA 18 VQA C07 C19 C 0 1 Y N N 37.585 -9.294 -2.631 -5.204 0.333 1.036 C07 VQA 19 VQA C08 C20 C 0 1 Y N N 38.788 -8.783 -2.466 -5.292 -0.682 1.989 C08 VQA 20 VQA C09 C21 C 0 1 Y N N 39.107 -7.943 -1.234 -5.478 -0.361 3.318 C09 VQA 21 VQA C23 C22 C 0 1 N N N 42.522 -4.362 0.217 6.914 -0.016 0.936 C23 VQA 22 VQA C24 C23 C 0 1 N N N 43.578 -5.410 0.585 8.154 0.292 0.094 C24 VQA 23 VQA C25 C24 C 0 1 N N N 43.805 -5.415 2.099 9.411 -0.072 0.886 C25 VQA 24 VQA C26 C25 C 0 1 N N N 44.372 -6.757 2.577 10.632 0.232 0.056 C26 VQA 25 VQA C29 C26 C 0 1 N N N 38.716 -8.984 -5.540 -2.518 -0.340 -0.418 C29 VQA 26 VQA C30 C27 C 0 1 Y N N 39.763 -9.949 -6.102 -2.193 -1.773 -0.577 C30 VQA 27 VQA C31 C28 C 0 1 Y N N 40.606 -10.789 -5.152 -1.020 -2.157 -1.228 C31 VQA 28 VQA C32 C29 C 0 1 Y N N 41.501 -11.623 -5.633 -0.722 -3.497 -1.373 C32 VQA 29 VQA C33 C30 C 0 1 Y N N 41.690 -11.754 -7.142 -1.583 -4.458 -0.875 C33 VQA 30 VQA C34 C31 C 0 1 Y N N 40.961 -11.028 -7.963 -2.748 -4.084 -0.229 C34 VQA 31 VQA C35 C32 C 0 1 Y N N 39.927 -10.060 -7.404 -3.054 -2.748 -0.072 C35 VQA 32 VQA O01 O1 O 0 1 N N N 34.221 -8.192 -5.505 -2.797 3.532 -2.645 O01 VQA 33 VQA O27 O2 O 0 1 N N N 45.334 -7.304 1.971 10.509 0.692 -1.054 O27 VQA 34 VQA O28 O3 O 0 1 N N N 43.879 -7.316 3.595 11.857 -0.009 0.551 O28 VQA 35 VQA H101 H1 H 0 0 N N N 38.406 -7.139 0.550 -5.740 1.208 4.746 H101 VQA 36 VQA H111 H2 H 0 0 N N N 36.028 -8.158 0.242 -5.587 3.005 3.073 H111 VQA 37 VQA H121 H3 H 0 0 N N N 35.522 -9.461 -1.703 -5.244 2.457 0.699 H121 VQA 38 VQA H132 H4 H 0 0 N N N 38.407 -11.901 -3.052 -6.924 -0.770 -0.620 H1 VQA 39 VQA H131 H5 H 0 0 N N N 37.618 -12.200 -4.722 -5.770 -0.950 -2.081 H131 VQA 40 VQA H141 H7 H 0 0 N N N 36.144 -7.960 -4.065 -4.253 2.493 -0.851 H141 VQA 41 VQA H152 H8 H 0 0 N N N 37.883 -6.325 -4.486 -1.647 2.644 0.112 H152 VQA 42 VQA H151 H9 H 0 0 N N N 37.108 -6.114 -6.093 -2.988 2.099 1.164 H151 VQA 43 VQA H171 H11 H 0 0 N N N 40.795 -7.631 -6.432 -0.546 0.736 2.009 H171 VQA 44 VQA H172 H12 H 0 0 N N N 39.991 -6.025 -6.486 -0.597 -0.910 1.332 H172 VQA 45 VQA H182 H13 H 0 0 N N N 39.494 -6.545 -3.918 0.630 -0.122 -0.674 H182 VQA 46 VQA H181 H14 H 0 0 N N N 40.895 -7.655 -4.095 0.680 1.523 0.003 H181 VQA 47 VQA H191 H15 H 0 0 N N N 42.395 -5.922 -4.490 1.951 0.680 1.958 H191 VQA 48 VQA H192 H16 H 0 0 N N N 41.141 -4.860 -5.218 1.900 -0.966 1.282 H192 VQA 49 VQA H201 H17 H 0 0 N N N 41.082 -3.793 -3.208 3.127 -0.178 -0.725 H201 VQA 50 VQA H202 H18 H 0 0 N N N 40.234 -5.250 -2.587 3.178 1.467 -0.048 H202 VQA 51 VQA H212 H19 H 0 0 N N N 42.112 -6.057 -1.522 4.449 0.624 1.908 H212 VQA 52 VQA H211 H20 H 0 0 N N N 43.230 -5.403 -2.767 4.398 -1.022 1.231 H211 VQA 53 VQA H221 H21 H 0 0 N N N 43.646 -3.608 -1.466 5.624 -0.235 -0.775 H221 VQA 54 VQA H222 H22 H 0 0 N N N 41.901 -3.184 -1.483 5.675 1.411 -0.099 H222 VQA 55 VQA H021 H23 H 0 0 N N N 35.564 -7.147 -6.681 -1.489 2.042 -2.036 H021 VQA 56 VQA H032 H24 H 0 0 N N N 36.167 -8.920 -7.991 -3.722 1.710 -3.987 H032 VQA 57 VQA H031 H25 H 0 0 N N N 34.805 -9.806 -7.224 -2.177 0.822 -3.872 H031 VQA 58 VQA H041 H26 H 0 0 N N N 36.255 -11.121 -5.939 -4.782 -0.004 -2.929 H041 VQA 59 VQA H042 H27 H 0 0 N N N 37.551 -10.549 -7.043 -3.235 -0.887 -2.804 H042 VQA 60 VQA H081 H29 H 0 0 N N N 39.553 -8.960 -3.208 -5.209 -1.716 1.688 H081 VQA 61 VQA H091 H30 H 0 0 N N N 40.093 -7.521 -1.109 -5.546 -1.146 4.057 H091 VQA 62 VQA H232 H31 H 0 0 N N N 42.673 -3.465 0.835 6.946 0.568 1.857 H232 VQA 63 VQA H231 H32 H 0 0 N N N 41.521 -4.776 0.410 6.895 -1.078 1.180 H231 VQA 64 VQA H241 H33 H 0 0 N N N 43.232 -6.404 0.265 8.122 -0.291 -0.826 H241 VQA 65 VQA H242 H34 H 0 0 N N N 44.523 -5.170 0.076 8.172 1.355 -0.149 H242 VQA 66 VQA H251 H35 H 0 0 N N N 44.514 -4.615 2.357 9.443 0.511 1.806 H251 VQA 67 VQA H252 H36 H 0 0 N N N 42.846 -5.232 2.605 9.392 -1.134 1.129 H252 VQA 68 VQA H311 H38 H 0 0 N N N 40.469 -10.700 -4.084 -0.347 -1.408 -1.618 H311 VQA 69 VQA H321 H39 H 0 0 N N N 42.103 -12.216 -4.960 0.186 -3.795 -1.877 H321 VQA 70 VQA H331 H40 H 0 0 N N N 42.422 -12.443 -7.536 -1.345 -5.505 -0.992 H331 VQA 71 VQA H341 H41 H 0 0 N N N 41.096 -11.119 -9.031 -3.414 -4.839 0.162 H341 VQA 72 VQA H351 H42 H 0 0 N N N 39.327 -9.464 -8.076 -3.963 -2.457 0.433 H351 VQA 73 VQA H011 H43 H 0 0 N N N 34.067 -7.456 -4.924 -2.308 3.796 -3.436 H011 VQA 74 VQA H5 H44 H 0 1 N N N 44.342 -8.128 3.766 12.609 0.201 -0.019 H5 VQA 75 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VQA C34 C35 DOUB Y N 1 VQA C34 C33 SING Y N 2 VQA C35 C30 SING Y N 3 VQA C33 C32 DOUB Y N 4 VQA C03 C04 SING N N 5 VQA C03 C02 SING N N 6 VQA C04 C05 SING N N 7 VQA C30 C29 SING N N 8 VQA C30 C31 DOUB Y N 9 VQA C02 O01 SING N N 10 VQA C02 C14 SING N N 11 VQA C16 C17 SING N N 12 VQA C16 C29 DOUB N N 13 VQA C16 C15 SING N N 14 VQA C17 C18 SING N N 15 VQA C32 C31 SING Y N 16 VQA C29 C05 SING N N 17 VQA C15 C14 SING N N 18 VQA C05 C14 SING N N 19 VQA C05 C06 SING N N 20 VQA C18 C19 SING N N 21 VQA C19 C20 SING N N 22 VQA C13 C06 DOUB N N 23 VQA C06 C07 SING N N 24 VQA C20 C21 SING N N 25 VQA C07 C08 DOUB Y N 26 VQA C07 C12 SING Y N 27 VQA C08 C09 SING Y N 28 VQA C21 C22 SING N N 29 VQA C12 C11 DOUB Y N 30 VQA C22 C23 SING N N 31 VQA C09 C10 DOUB Y N 32 VQA C11 C10 SING Y N 33 VQA C23 C24 SING N N 34 VQA C24 C25 SING N N 35 VQA O27 C26 DOUB N N 36 VQA C25 C26 SING N N 37 VQA C26 O28 SING N N 38 VQA C10 H101 SING N N 39 VQA C11 H111 SING N N 40 VQA C12 H121 SING N N 41 VQA C13 H132 SING N N 42 VQA C13 H131 SING N N 43 VQA C14 H141 SING N N 44 VQA C15 H152 SING N N 45 VQA C15 H151 SING N N 46 VQA C17 H171 SING N N 47 VQA C17 H172 SING N N 48 VQA C18 H182 SING N N 49 VQA C18 H181 SING N N 50 VQA C19 H191 SING N N 51 VQA C19 H192 SING N N 52 VQA C20 H201 SING N N 53 VQA C20 H202 SING N N 54 VQA C21 H212 SING N N 55 VQA C21 H211 SING N N 56 VQA C22 H221 SING N N 57 VQA C22 H222 SING N N 58 VQA C02 H021 SING N N 59 VQA C03 H032 SING N N 60 VQA C03 H031 SING N N 61 VQA C04 H041 SING N N 62 VQA C04 H042 SING N N 63 VQA C08 H081 SING N N 64 VQA C09 H091 SING N N 65 VQA C23 H232 SING N N 66 VQA C23 H231 SING N N 67 VQA C24 H241 SING N N 68 VQA C24 H242 SING N N 69 VQA C25 H251 SING N N 70 VQA C25 H252 SING N N 71 VQA C31 H311 SING N N 72 VQA C32 H321 SING N N 73 VQA C33 H331 SING N N 74 VQA C34 H341 SING N N 75 VQA C35 H351 SING N N 76 VQA O01 H011 SING N N 77 VQA O28 H5 SING N N 78 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VQA SMILES ACDLabs 12.01 "c4ccc(C(=C)/C31C(CC(CCCCCCCCCC(O)=O)=C1c2ccccc2)C(O)CC3)cc4" VQA InChI InChI 1.03 "InChI=1S/C32H40O3/c1-24(25-15-10-7-11-16-25)32-22-21-29(33)28(32)23-27(31(32)26-17-12-8-13-18-26)19-9-5-3-2-4-6-14-20-30(34)35/h7-8,10-13,15-18,28-29,33H,1-6,9,14,19-23H2,(H,34,35)/t28-,29+,32-/m0/s1" VQA InChIKey InChI 1.03 YGTFMMNUBBGVSN-LBRLCBGXSA-N VQA SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1CC[C@@]2([C@H]1CC(=C2c3ccccc3)CCCCCCCCCC(O)=O)C(=C)c4ccccc4" VQA SMILES CACTVS 3.385 "O[CH]1CC[C]2([CH]1CC(=C2c3ccccc3)CCCCCCCCCC(O)=O)C(=C)c4ccccc4" VQA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=C(c1ccccc1)[C@@]23CC[C@H]([C@@H]2CC(=C3c4ccccc4)CCCCCCCCCC(=O)O)O" VQA SMILES "OpenEye OEToolkits" 2.0.7 "C=C(c1ccccc1)C23CCC(C2CC(=C3c4ccccc4)CCCCCCCCCC(=O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VQA "SYSTEMATIC NAME" ACDLabs 12.01 "10-[(3aR,6R,6aR)-6-hydroxy-3-phenyl-3a-(1-phenylethenyl)-1,3a,4,5,6,6a-hexahydropentalen-2-yl]decanoic acid" VQA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "10-[(3~{a}~{R},6~{R},6~{a}~{R})-6-oxidanyl-3-phenyl-3~{a}-(1-phenylethenyl)-4,5,6,6~{a}-tetrahydro-1~{H}-pentalen-2-yl]decanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VQA "Create component" 2020-09-08 RCSB VQA "Modify atom id" 2022-02-23 RCSB VQA "Initial release" 2022-03-02 RCSB ##