data_VQD # _chem_comp.id VQD _chem_comp.name "(3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H25 F2 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-08 _chem_comp.pdbx_modified_date 2021-09-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 521.515 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VQD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7K1D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VQD C10 C1 C 0 1 Y N N -80.053 -73.483 9.448 -4.087 3.416 0.107 C10 VQD 1 VQD C11 C2 C 0 1 Y N N -78.813 -73.544 8.826 -4.699 4.451 -0.531 C11 VQD 2 VQD C12 C3 C 0 1 Y N N -77.642 -73.712 9.576 -5.693 4.221 -1.481 C12 VQD 3 VQD C13 C4 C 0 1 Y N N -77.707 -73.813 10.960 -6.081 2.956 -1.797 C13 VQD 4 VQD C14 C5 C 0 1 Y N N -78.979 -73.754 11.606 -5.471 1.862 -1.159 C14 VQD 5 VQD C15 C6 C 0 1 Y N N -79.049 -73.856 13.026 -5.845 0.541 -1.459 C15 VQD 6 VQD C16 C7 C 0 1 Y N N -80.287 -73.793 13.649 -5.234 -0.494 -0.821 C16 VQD 7 VQD C18 C8 C 0 1 Y N N -83.951 -71.034 12.454 -0.468 -0.531 1.185 C18 VQD 8 VQD C19 C9 C 0 1 Y N N -83.613 -69.839 11.722 0.239 0.580 0.871 C19 VQD 9 VQD C20 C10 C 0 1 N N R -84.367 -69.190 10.542 1.334 1.214 1.690 C20 VQD 10 VQD C21 C11 C 0 1 N N N -85.869 -69.299 10.627 1.087 2.723 1.801 C21 VQD 11 VQD C03 C12 C 0 1 N N N -83.621 -72.490 16.804 -2.654 -4.243 0.444 C03 VQD 12 VQD C04 C13 C 0 1 N N N -84.052 -72.223 15.357 -1.716 -3.088 0.677 C04 VQD 13 VQD C05 C14 C 0 1 N N R -82.895 -72.230 14.365 -2.308 -1.817 0.063 C05 VQD 14 VQD C06 C15 C 0 1 N N N -82.801 -73.561 13.624 -3.585 -1.435 0.815 C06 VQD 15 VQD C07 C16 C 0 1 Y N N -81.459 -73.633 12.902 -4.240 -0.264 0.128 C07 VQD 16 VQD C08 C17 C 0 1 Y N N -81.402 -73.522 11.521 -3.852 1.002 0.445 C08 VQD 17 VQD C09 C18 C 0 1 Y N N -80.128 -73.592 10.872 -4.460 2.095 -0.194 C09 VQD 18 VQD C23 C19 C 0 1 N N N -85.753 -70.845 8.766 3.433 3.214 1.672 C23 VQD 19 VQD C24 C20 C 0 1 N N N -84.229 -70.814 8.811 3.800 1.730 1.554 C24 VQD 20 VQD C26 C21 C 0 1 N N N -83.056 -68.571 8.528 2.748 0.169 -0.022 C26 VQD 21 VQD C27 C22 C 0 1 Y N N -82.520 -68.934 7.142 4.081 -0.125 -0.587 C27 VQD 22 VQD C28 C23 C 0 1 Y N N -82.867 -68.098 6.104 4.202 -0.544 -1.914 C28 VQD 23 VQD C29 C24 C 0 1 Y N N -82.420 -68.367 4.832 5.448 -0.818 -2.437 C29 VQD 24 VQD C30 C25 C 0 1 Y N N -81.619 -69.476 4.617 6.580 -0.679 -1.650 C30 VQD 25 VQD C32 C26 C 0 1 Y N N -81.262 -70.325 5.663 6.466 -0.263 -0.330 C32 VQD 26 VQD C34 C27 C 0 1 Y N N -81.717 -70.052 6.941 5.224 0.020 0.202 C34 VQD 27 VQD F31 F1 F 0 1 N N N -81.199 -69.700 3.340 7.798 -0.949 -2.169 F31 VQD 28 VQD F33 F2 F 0 1 N N N -80.484 -71.426 5.448 7.573 -0.129 0.433 F33 VQD 29 VQD N02 N1 N 0 1 N N N -84.048 -73.728 17.468 -2.399 -5.443 1.003 N02 VQD 30 VQD N17 N2 N 0 1 Y N N -83.000 -71.163 13.384 -1.336 -0.726 0.166 N17 VQD 31 VQD N25 N3 N 0 1 N N N -83.850 -69.517 9.259 2.632 1.003 1.030 N25 VQD 32 VQD N36 N4 N 0 1 Y N N -82.497 -69.371 12.271 -0.225 1.004 -0.310 N36 VQD 33 VQD N37 N5 N 0 1 Y N N -82.141 -70.175 13.250 -1.160 0.211 -0.699 N37 VQD 34 VQD O01 O1 O 0 1 N N N -83.732 -74.101 18.795 -3.281 -6.528 0.783 O01 VQD 35 VQD O22 O2 O 0 1 N N N -86.343 -70.483 10.013 2.220 3.341 2.417 O22 VQD 36 VQD O35 O3 O 0 1 N N N -82.843 -67.515 9.020 1.756 -0.341 -0.506 O35 VQD 37 VQD O38 O4 O 0 1 N N N -82.958 -71.682 17.361 -3.640 -4.094 -0.248 O38 VQD 38 VQD H1 H1 H 0 1 N N N -80.951 -73.355 8.863 -3.315 3.610 0.837 H1 VQD 39 VQD H2 H2 H 0 1 N N N -78.751 -73.461 7.751 -4.411 5.465 -0.298 H2 VQD 40 VQD H3 H3 H 0 1 N N N -76.686 -73.763 9.077 -6.164 5.060 -1.972 H3 VQD 41 VQD H4 H4 H 0 1 N N N -76.805 -73.935 11.541 -6.853 2.793 -2.535 H4 VQD 42 VQD H5 H5 H 0 1 N N N -78.149 -73.981 13.610 -6.615 0.348 -2.193 H5 VQD 43 VQD H6 H6 H 0 1 N N N -80.347 -73.868 14.725 -5.523 -1.508 -1.054 H6 VQD 44 VQD H7 H7 H 0 1 N N N -84.795 -71.687 12.286 -0.358 -1.141 2.070 H7 VQD 45 VQD H8 H8 H 0 1 N N N -84.169 -68.115 10.663 1.351 0.770 2.686 H8 VQD 46 VQD H9 H9 H 0 1 N N N -86.319 -68.431 10.122 0.940 3.142 0.806 H9 VQD 47 VQD H10 H10 H 0 1 N N N -86.167 -69.303 11.686 0.199 2.903 2.408 H10 VQD 48 VQD H11 H11 H 0 1 N N N -84.540 -71.238 15.315 -1.577 -2.943 1.749 H11 VQD 49 VQD H12 H12 H 0 1 N N N -84.770 -73.001 15.059 -0.753 -3.301 0.212 H12 VQD 50 VQD H13 H13 H 0 1 N N N -81.963 -72.096 14.934 -2.544 -1.997 -0.986 H13 VQD 51 VQD H14 H14 H 0 1 N N N -83.618 -73.634 12.892 -4.270 -2.283 0.821 H14 VQD 52 VQD H15 H15 H 0 1 N N N -82.878 -74.390 14.343 -3.335 -1.162 1.840 H15 VQD 53 VQD H16 H16 H 0 1 N N N -82.305 -73.385 10.944 -3.080 1.164 1.183 H16 VQD 54 VQD H17 H17 H 0 1 N N N -86.098 -70.140 7.995 4.233 3.747 2.185 H17 VQD 55 VQD H18 H18 H 0 1 N N N -86.078 -71.863 8.504 3.294 3.635 0.676 H18 VQD 56 VQD H19 H19 H 0 1 N N N -83.856 -71.578 9.509 4.641 1.613 0.871 H19 VQD 57 VQD H20 H20 H 0 1 N N N -83.818 -71.002 7.808 4.066 1.338 2.535 H20 VQD 58 VQD H21 H21 H 0 1 N N N -83.488 -67.234 6.289 3.321 -0.653 -2.529 H21 VQD 59 VQD H22 H22 H 0 1 N N N -82.690 -67.721 4.010 5.541 -1.142 -3.463 H22 VQD 60 VQD H23 H23 H 0 1 N N N -81.453 -70.695 7.767 5.136 0.343 1.228 H23 VQD 61 VQD H24 H24 H 0 1 N N N -84.610 -74.362 16.936 -1.611 -5.562 1.556 H24 VQD 62 VQD H25 H25 H 0 1 N N N -83.200 -73.424 19.196 -3.015 -7.347 1.225 H25 VQD 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VQD F31 C30 SING N N 1 VQD C30 C29 DOUB Y N 2 VQD C30 C32 SING Y N 3 VQD C29 C28 SING Y N 4 VQD F33 C32 SING N N 5 VQD C32 C34 DOUB Y N 6 VQD C28 C27 DOUB Y N 7 VQD C34 C27 SING Y N 8 VQD C27 C26 SING N N 9 VQD C26 O35 DOUB N N 10 VQD C26 N25 SING N N 11 VQD C23 C24 SING N N 12 VQD C23 O22 SING N N 13 VQD C24 N25 SING N N 14 VQD C11 C10 DOUB Y N 15 VQD C11 C12 SING Y N 16 VQD N25 C20 SING N N 17 VQD C10 C09 SING Y N 18 VQD C12 C13 DOUB Y N 19 VQD O22 C21 SING N N 20 VQD C20 C21 SING N N 21 VQD C20 C19 SING N N 22 VQD C09 C08 DOUB Y N 23 VQD C09 C14 SING Y N 24 VQD C13 C14 SING Y N 25 VQD C08 C07 SING Y N 26 VQD C14 C15 DOUB Y N 27 VQD C19 N36 SING Y N 28 VQD C19 C18 DOUB Y N 29 VQD N36 N37 DOUB Y N 30 VQD C18 N17 SING Y N 31 VQD C07 C06 SING N N 32 VQD C07 C16 DOUB Y N 33 VQD C15 C16 SING Y N 34 VQD N37 N17 SING Y N 35 VQD N17 C05 SING N N 36 VQD C06 C05 SING N N 37 VQD C05 C04 SING N N 38 VQD C04 C03 SING N N 39 VQD C03 O38 DOUB N N 40 VQD C03 N02 SING N N 41 VQD N02 O01 SING N N 42 VQD C10 H1 SING N N 43 VQD C11 H2 SING N N 44 VQD C12 H3 SING N N 45 VQD C13 H4 SING N N 46 VQD C15 H5 SING N N 47 VQD C16 H6 SING N N 48 VQD C18 H7 SING N N 49 VQD C20 H8 SING N N 50 VQD C21 H9 SING N N 51 VQD C21 H10 SING N N 52 VQD C04 H11 SING N N 53 VQD C04 H12 SING N N 54 VQD C05 H13 SING N N 55 VQD C06 H14 SING N N 56 VQD C06 H15 SING N N 57 VQD C08 H16 SING N N 58 VQD C23 H17 SING N N 59 VQD C23 H18 SING N N 60 VQD C24 H19 SING N N 61 VQD C24 H20 SING N N 62 VQD C28 H21 SING N N 63 VQD C29 H22 SING N N 64 VQD C34 H23 SING N N 65 VQD N02 H24 SING N N 66 VQD O01 H25 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VQD SMILES ACDLabs 12.01 "c1c5c(ccc1)ccc(CC(CC(=O)NO)n2cc(nn2)C3COCCN3C(=O)c4ccc(c(c4)F)F)c5" VQD InChI InChI 1.03 "InChI=1S/C27H25F2N5O4/c28-22-8-7-20(13-23(22)29)27(36)33-9-10-38-16-25(33)24-15-34(32-30-24)21(14-26(35)31-37)12-17-5-6-18-3-1-2-4-19(18)11-17/h1-8,11,13,15,21,25,37H,9-10,12,14,16H2,(H,31,35)/t21-,25+/m1/s1" VQD InChIKey InChI 1.03 DDQJIEMCJUWZNL-BWKNWUBXSA-N VQD SMILES_CANONICAL CACTVS 3.385 "ONC(=O)C[C@@H](Cc1ccc2ccccc2c1)n3cc(nn3)[C@@H]4COCCN4C(=O)c5ccc(F)c(F)c5" VQD SMILES CACTVS 3.385 "ONC(=O)C[CH](Cc1ccc2ccccc2c1)n3cc(nn3)[CH]4COCCN4C(=O)c5ccc(F)c(F)c5" VQD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)C[C@H](CC(=O)NO)n3cc(nn3)[C@@H]4COCCN4C(=O)c5ccc(c(c5)F)F" VQD SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2cc(ccc2c1)CC(CC(=O)NO)n3cc(nn3)C4COCCN4C(=O)c5ccc(c(c5)F)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VQD "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide" VQD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-[4-[(3~{R})-4-[3,4-bis(fluoranyl)phenyl]carbonylmorpholin-3-yl]-1,2,3-triazol-1-yl]-4-naphthalen-2-yl-~{N}-oxidanyl-butanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VQD "Create component" 2020-09-08 RCSB VQD "Initial release" 2021-09-22 RCSB ##