data_VRC # _chem_comp.id VRC _chem_comp.name "(4S)-2-(aminomethyl)-4-nitrocyclohexa-2,5-dien-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H8 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-02 _chem_comp.pdbx_modified_date 2022-10-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 168.150 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VRC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FM0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VRC N1 N1 N 0 1 N N N -3.295 16.583 -34.187 -3.068 -1.687 0.512 N1 VRC 1 VRC O1 O1 O 0 1 N N N 1.861 12.672 -36.123 3.329 -0.797 0.625 O1 VRC 2 VRC C1 C1 C 0 1 N N N -1.850 12.473 -34.494 -0.264 1.995 0.025 C1 VRC 3 VRC C5 C2 C 0 1 N N S -0.185 13.610 -35.771 1.164 0.055 0.623 C5 VRC 4 VRC C6 C3 C 0 1 N N N -3.165 15.874 -35.550 -2.230 -1.306 -0.632 C6 VRC 5 VRC C4 C4 C 0 1 N N N -1.004 14.708 -35.944 0.051 -0.824 0.147 C4 VRC 6 VRC C3 C5 C 0 1 N N N -2.262 14.706 -35.384 -1.149 -0.362 -0.172 C3 VRC 7 VRC C2 C6 C 0 1 N N N -2.720 13.582 -34.636 -1.421 1.084 -0.067 C2 VRC 8 VRC O2 O2 O 0 1 N N N -3.863 13.590 -34.119 -2.560 1.510 -0.056 O2 VRC 9 VRC C C7 C 0 1 N N N -0.613 12.486 -35.045 0.928 1.504 0.337 C VRC 10 VRC N N2 N 0 1 N N N 1.147 13.606 -36.345 2.405 -0.360 -0.036 N VRC 11 VRC O O3 O 0 1 N N N 1.510 14.538 -36.993 2.511 -0.269 -1.246 O VRC 12 VRC H1 H1 H 0 1 N N N -3.900 17.374 -34.278 -3.801 -2.320 0.230 H1 VRC 13 VRC H2 H2 H 0 1 N N N -3.676 15.947 -33.516 -2.510 -2.086 1.252 H2 VRC 14 VRC H4 H4 H 0 1 N N N -2.177 11.606 -33.939 -0.387 3.051 -0.163 H4 VRC 15 VRC H5 H5 H 0 1 N N N -0.585 13.166 -36.695 1.279 -0.076 1.699 H5 VRC 16 VRC H6 H6 H 0 1 N N N -2.743 16.568 -36.292 -1.774 -2.199 -1.061 H6 VRC 17 VRC H7 H7 H 0 1 N N N -4.155 15.534 -35.888 -2.845 -0.815 -1.386 H7 VRC 18 VRC H8 H8 H 0 1 N N N -0.661 15.560 -36.513 0.236 -1.884 0.054 H8 VRC 19 VRC H9 H9 H 0 1 N N N 0.042 11.635 -34.927 1.767 2.182 0.386 H9 VRC 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VRC O N DOUB N N 1 VRC N O1 DOUB N N 2 VRC N C5 SING N N 3 VRC C4 C5 SING N N 4 VRC C4 C3 DOUB N N 5 VRC C5 C SING N N 6 VRC C6 C3 SING N N 7 VRC C6 N1 SING N N 8 VRC C3 C2 SING N N 9 VRC C C1 DOUB N N 10 VRC C2 C1 SING N N 11 VRC C2 O2 DOUB N N 12 VRC N1 H1 SING N N 13 VRC N1 H2 SING N N 14 VRC C1 H4 SING N N 15 VRC C5 H5 SING N N 16 VRC C6 H6 SING N N 17 VRC C6 H7 SING N N 18 VRC C4 H8 SING N N 19 VRC C H9 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VRC SMILES ACDLabs 12.01 "O=N(=O)C1C=CC(=O)C(CN)=C1" VRC InChI InChI 1.06 "InChI=1S/C7H8N2O3/c8-4-5-3-6(9(11)12)1-2-7(5)10/h1-3,6H,4,8H2" VRC InChIKey InChI 1.06 RIRRHVGTJTXLLP-UHFFFAOYSA-N VRC SMILES_CANONICAL CACTVS 3.385 "NCC1=C[C@H](C=CC1=O)[N](=O)=O" VRC SMILES CACTVS 3.385 "NCC1=C[CH](C=CC1=O)[N](=O)=O" VRC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1=CC(=O)C(=CC1N(=O)=O)CN" VRC SMILES "OpenEye OEToolkits" 2.0.7 "C1=CC(=O)C(=CC1N(=O)=O)CN" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VRC "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-2-(aminomethyl)-4-nitrocyclohexa-2,5-dien-1-one" VRC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(aminomethyl)-4-nitro-cyclohexa-2,5-dien-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VRC "Create component" 2022-09-02 RCSB VRC "Initial release" 2022-11-02 RCSB #