data_VRI # _chem_comp.id VRI _chem_comp.name "[(3~{R},5~{S},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H35 N O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-29 _chem_comp.pdbx_modified_date 2024-04-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 397.572 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VRI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OKJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VRI CAT C1 C 0 1 N N N N N N 1.159 12.241 14.098 6.237 -2.390 0.116 CAT VRI 1 VRI CAR C2 C 0 1 N N N N N N -0.159 12.507 13.366 5.922 -0.917 0.064 CAR VRI 2 VRI OAS O1 O 0 1 N N N N N N -0.241 13.280 12.420 6.516 -0.199 -0.704 OAS VRI 3 VRI CAQ C3 C 0 1 N N S N N N -1.370 11.748 13.896 4.866 -0.340 0.972 CAQ VRI 4 VRI CAP C4 C 0 1 N N N N N N -2.701 12.506 13.708 5.139 1.163 1.224 CAP VRI 5 VRI CAO C5 C 0 1 N N N N N N -3.785 11.505 13.422 3.867 1.923 0.757 CAO VRI 6 VRI CAK C6 C 0 1 N N S N N N -3.029 10.185 13.756 2.772 0.855 0.859 CAK VRI 7 VRI CAL C7 C 0 1 N N S N N N -1.642 10.407 13.184 3.500 -0.397 0.296 CAL VRI 8 VRI CAV C8 C 0 1 N N N N N N -1.599 10.507 11.658 3.669 -0.259 -1.219 CAV VRI 9 VRI CAM C9 C 0 1 N N N N N N -0.739 9.272 13.668 2.635 -1.602 0.608 CAM VRI 10 VRI CAN C10 C 0 1 N N N N N N -1.273 7.963 13.156 1.319 -1.436 -0.170 CAN VRI 11 VRI CAJ C11 C 0 1 N N S N N N -2.724 7.769 13.710 0.620 -0.130 0.193 CAJ VRI 12 VRI CAI C12 C 0 1 N N R N N N -3.658 8.900 13.241 1.537 1.091 0.011 CAI VRI 13 VRI CAH C13 C 0 1 N N N N N N -5.073 8.732 13.833 0.788 2.349 0.452 CAH VRI 14 VRI CAG C14 C 0 1 N N N N N N -5.634 7.389 13.410 -0.465 2.525 -0.408 CAG VRI 15 VRI CAD C15 C 0 1 N N S N N N -4.708 6.331 14.045 -1.375 1.307 -0.240 CAD VRI 16 VRI CAC C16 C 0 1 N N N N N N -5.372 5.006 13.917 -2.625 1.481 -1.105 CAC VRI 17 VRI CAE C17 C 0 1 N N S N N N -3.315 6.382 13.366 -0.632 0.049 -0.665 CAE VRI 18 VRI CAU C18 C 0 1 N N N N N N -3.372 6.174 11.810 -0.231 0.163 -2.137 CAU VRI 19 VRI CAF C19 C 0 1 N N N N N N -2.493 5.287 14.000 -1.555 -1.158 -0.479 CAF VRI 20 VRI CAA C20 C 0 1 N N N N N N -3.141 3.902 13.720 -2.810 -0.977 -1.335 CAA VRI 21 VRI CAB C21 C 0 1 N N R N N N -4.409 3.943 14.421 -3.537 0.264 -0.934 CAB VRI 22 VRI OAW O2 O 0 1 N N N N N N -4.464 3.610 15.702 -3.919 0.144 0.438 OAW VRI 23 VRI SAX S1 S 0 1 N N N N N N -5.274 2.638 16.503 -5.335 -0.376 0.643 SAX VRI 24 VRI OAY O3 O 0 1 N N N N N N -6.672 3.024 16.307 -5.614 -0.242 2.030 OAY VRI 25 VRI OAZ O4 O 0 1 N N N N N N -4.817 2.896 17.892 -6.132 0.220 -0.372 OAZ VRI 26 VRI NBA N1 N 0 1 N N N N N N -4.946 1.248 16.096 -5.311 -2.001 0.325 NBA VRI 27 VRI H1 H1 H 0 1 N N N N N N 1.961 12.838 13.639 5.599 -2.923 -0.589 H1 VRI 28 VRI H2 H2 H 0 1 N N N N N N 1.053 12.521 15.157 7.282 -2.548 -0.149 H2 VRI 29 VRI H3 H3 H 0 1 N N N N N N 1.410 11.173 14.024 6.057 -2.765 1.123 H3 VRI 30 VRI H4 H4 H 0 1 N N N N N N -1.226 11.553 14.969 4.843 -0.884 1.916 H4 VRI 31 VRI H5 H5 H 0 1 N N N N N N -2.612 13.208 12.865 5.311 1.339 2.286 H5 VRI 32 VRI H6 H6 H 0 1 N N N N N N -2.943 13.063 14.625 6.003 1.489 0.646 H6 VRI 33 VRI H7 H7 H 0 1 N N N N N N -4.658 11.652 14.074 3.652 2.760 1.422 H7 VRI 34 VRI H8 H8 H 0 1 N N N N N N -4.104 11.538 12.370 3.978 2.265 -0.272 H8 VRI 35 VRI H9 H9 H 0 1 N N N N N N -2.944 10.113 14.850 2.493 0.696 1.901 H9 VRI 36 VRI H10 H10 H 0 1 N N N N N N -2.253 11.327 11.325 2.688 -0.183 -1.688 H10 VRI 37 VRI H11 H11 H 0 1 N N N N N N -0.567 10.706 11.333 4.248 0.637 -1.440 H11 VRI 38 VRI H12 H12 H 0 1 N N N N N N -1.946 9.560 11.219 4.190 -1.134 -1.607 H12 VRI 39 VRI H13 H13 H 0 1 N N N N N N -0.723 9.258 14.768 3.141 -2.514 0.289 H13 VRI 40 VRI H14 H14 H 0 1 N N N N N N 0.282 9.427 13.288 2.432 -1.646 1.678 H14 VRI 41 VRI H15 H15 H 0 1 N N N N N N -1.294 7.975 12.056 1.534 -1.440 -1.239 H15 VRI 42 VRI H16 H16 H 0 1 N N N N N N -0.631 7.139 13.501 0.659 -2.271 0.063 H16 VRI 43 VRI H17 H17 H 0 1 N N N N N N -2.660 7.832 14.806 0.326 -0.168 1.242 H17 VRI 44 VRI H18 H18 H 0 1 N N N N N N -3.710 8.914 12.142 1.839 1.172 -1.033 H18 VRI 45 VRI H19 H19 H 0 1 N N N N N N -5.021 8.780 14.931 0.499 2.253 1.499 H19 VRI 46 VRI H20 H20 H 0 1 N N N N N N -5.725 9.536 13.462 1.436 3.218 0.333 H20 VRI 47 VRI H21 H21 H 0 1 N N N N N N -6.663 7.270 13.780 -0.998 3.422 -0.095 H21 VRI 48 VRI H22 H22 H 0 1 N N N N N N -5.625 7.298 12.314 -0.176 2.620 -1.455 H22 VRI 49 VRI H23 H23 H 0 1 N N N N N N -4.583 6.572 15.111 -1.668 1.214 0.806 H23 VRI 50 VRI H24 H24 H 0 1 N N N N N N -6.292 4.991 14.519 -3.158 2.381 -0.796 H24 VRI 51 VRI H25 H25 H 0 1 N N N N N N -5.620 4.814 12.863 -2.334 1.573 -2.151 H25 VRI 52 VRI H26 H26 H 0 1 N N N N N N -3.795 5.183 11.587 0.292 -0.744 -2.442 H26 VRI 53 VRI H27 H27 H 0 1 N N N N N N -4.005 6.952 11.359 -1.124 0.290 -2.749 H27 VRI 54 VRI H28 H28 H 0 1 N N N N N N -2.356 6.241 11.394 0.426 1.022 -2.269 H28 VRI 55 VRI H29 H29 H 0 1 N N N N N N -1.477 5.305 13.579 -1.033 -2.064 -0.786 H29 VRI 56 VRI H30 H30 H 0 1 N N N N N N -2.443 5.452 15.086 -1.839 -1.239 0.570 H30 VRI 57 VRI H31 H31 H 0 1 N N N N N N -3.298 3.758 12.641 -2.526 -0.896 -2.384 H31 VRI 58 VRI H32 H32 H 0 1 N N N N N N -2.508 3.091 14.110 -3.467 -1.837 -1.203 H32 VRI 59 VRI H33 H33 H 0 1 N N N N N N -4.886 3.059 13.972 -4.428 0.389 -1.550 H33 VRI 60 VRI H34 H34 H 0 1 N N N N N N -5.490 0.605 16.635 -4.482 -2.432 0.063 H34 VRI 61 VRI H35 H35 H 0 1 N N N N N N -5.153 1.128 15.125 -6.126 -2.522 0.400 H35 VRI 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VRI CAV CAL SING N N 1 VRI CAU CAE SING N N 2 VRI OAS CAR DOUB N N 3 VRI CAN CAM SING N N 4 VRI CAN CAJ SING N N 5 VRI CAL CAM SING N N 6 VRI CAL CAK SING N N 7 VRI CAL CAQ SING N N 8 VRI CAI CAJ SING N N 9 VRI CAI CAK SING N N 10 VRI CAI CAH SING N N 11 VRI CAR CAQ SING N N 12 VRI CAR CAT SING N N 13 VRI CAE CAJ SING N N 14 VRI CAE CAF SING N N 15 VRI CAE CAD SING N N 16 VRI CAG CAH SING N N 17 VRI CAG CAD SING N N 18 VRI CAO CAP SING N N 19 VRI CAO CAK SING N N 20 VRI CAP CAQ SING N N 21 VRI CAA CAF SING N N 22 VRI CAA CAB SING N N 23 VRI CAC CAD SING N N 24 VRI CAC CAB SING N N 25 VRI CAB OAW SING N N 26 VRI OAW SAX SING N N 27 VRI NBA SAX SING N N 28 VRI OAY SAX DOUB N N 29 VRI SAX OAZ DOUB N N 30 VRI CAT H1 SING N N 31 VRI CAT H2 SING N N 32 VRI CAT H3 SING N N 33 VRI CAQ H4 SING N N 34 VRI CAP H5 SING N N 35 VRI CAP H6 SING N N 36 VRI CAO H7 SING N N 37 VRI CAO H8 SING N N 38 VRI CAK H9 SING N N 39 VRI CAV H10 SING N N 40 VRI CAV H11 SING N N 41 VRI CAV H12 SING N N 42 VRI CAM H13 SING N N 43 VRI CAM H14 SING N N 44 VRI CAN H15 SING N N 45 VRI CAN H16 SING N N 46 VRI CAJ H17 SING N N 47 VRI CAI H18 SING N N 48 VRI CAH H19 SING N N 49 VRI CAH H20 SING N N 50 VRI CAG H21 SING N N 51 VRI CAG H22 SING N N 52 VRI CAD H23 SING N N 53 VRI CAC H24 SING N N 54 VRI CAC H25 SING N N 55 VRI CAU H26 SING N N 56 VRI CAU H27 SING N N 57 VRI CAU H28 SING N N 58 VRI CAF H29 SING N N 59 VRI CAF H30 SING N N 60 VRI CAA H31 SING N N 61 VRI CAA H32 SING N N 62 VRI CAB H33 SING N N 63 VRI NBA H34 SING N N 64 VRI NBA H35 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VRI InChI InChI 1.06 "InChI=1S/C21H35NO4S/c1-13(23)17-6-7-18-16-5-4-14-12-15(26-27(22,24)25)8-10-20(14,2)19(16)9-11-21(17,18)3/h14-19H,4-12H2,1-3H3,(H2,22,24,25)/t14-,15+,16-,17+,18-,19-,20-,21+/m0/s1" VRI InChIKey InChI 1.06 TULYOJHBEVGAOD-SYBPFIFISA-N VRI SMILES_CANONICAL CACTVS 3.385 "CC(=O)[C@H]1CC[C@H]2[C@@H]3CC[C@H]4C[C@@H](CC[C@]4(C)[C@H]3CC[C@]12C)O[S](N)(=O)=O" VRI SMILES CACTVS 3.385 "CC(=O)[CH]1CC[CH]2[CH]3CC[CH]4C[CH](CC[C]4(C)[CH]3CC[C]12C)O[S](N)(=O)=O" VRI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC[C@@H]4[C@@]3(CC[C@H](C4)OS(=O)(=O)N)C)C" VRI SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)C1CCC2C1(CCC3C2CCC4C3(CCC(C4)OS(=O)(=O)N)C)C" # _pdbx_chem_comp_identifier.comp_id VRI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{R},5~{S},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VRI "Create component" 2023-03-29 PDBE VRI "Initial release" 2024-04-10 RCSB #