data_VRM
#
_chem_comp.id VRM
_chem_comp.name "3-(3-methyl-1H-pyrazol-5-yl)pyridine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H9 N3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-09-11
_chem_comp.pdbx_modified_date 2021-01-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 159.188
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VRM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7JYT
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VRM C4 C1 C 0 1 Y N N 23.085 -11.473 -9.060 -0.591 0.203 -0.001 C4 VRM 1
VRM C8 C2 C 0 1 Y N N 23.193 -10.158 -8.289 0.881 0.052 0.000 C8 VRM 2
VRM C10 C3 C 0 1 Y N N 22.221 -8.369 -7.056 3.082 0.982 -0.004 C10 VRM 3
VRM N12 N1 N 0 1 Y N N 24.541 -8.397 -7.488 2.774 -1.351 0.002 N12 VRM 4
VRM C13 C4 C 0 1 Y N N 24.423 -9.537 -8.143 1.464 -1.216 0.001 C13 VRM 5
VRM C1 C5 C 0 1 N N N 21.526 -14.635 -10.261 -4.085 -0.986 -0.003 C1 VRM 6
VRM C11 C6 C 0 1 Y N N 23.487 -7.814 -6.952 3.582 -0.308 0.003 C11 VRM 7
VRM C2 C7 C 0 1 Y N N 22.367 -13.407 -9.918 -2.780 -0.234 -0.002 C2 VRM 8
VRM C3 C8 C 0 1 Y N N 21.984 -12.358 -9.050 -1.509 -0.809 -0.002 C3 VRM 9
VRM C9 C9 C 0 1 Y N N 22.062 -9.567 -7.740 1.712 1.178 -0.006 C9 VRM 10
VRM N5 N2 N 0 1 Y N N 23.986 -11.987 -9.860 -1.282 1.378 0.004 N5 VRM 11
VRM N7 N3 N 0 1 Y N N 23.563 -13.138 -10.371 -2.648 1.069 0.006 N7 VRM 12
VRM H101 H1 H 0 0 N N N 21.369 -7.876 -6.611 3.754 1.827 -0.003 H101 VRM 13
VRM H131 H2 H 0 0 N N N 25.302 -9.994 -8.573 0.835 -2.094 0.001 H131 VRM 14
VRM H13 H3 H 0 1 N N N 22.082 -15.277 -10.960 -4.401 -1.167 1.025 H13 VRM 15
VRM H12 H4 H 0 1 N N N 21.307 -15.198 -9.342 -4.844 -0.396 -0.517 H12 VRM 16
VRM H11 H5 H 0 1 N N N 20.583 -14.315 -10.728 -3.956 -1.939 -0.516 H11 VRM 17
VRM H111 H6 H 0 0 N N N 23.613 -6.883 -6.420 4.650 -0.464 0.009 H111 VRM 18
VRM H31 H7 H 0 1 N N N 21.058 -12.256 -8.503 -1.289 -1.867 -0.001 H31 VRM 19
VRM H91 H8 H 0 1 N N N 21.089 -10.025 -7.842 1.295 2.174 -0.011 H91 VRM 20
VRM H1 H9 H 0 1 N N N 24.873 -11.569 -10.059 -0.897 2.268 0.005 H1 VRM 21
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VRM N7 C2 DOUB Y N 1
VRM N7 N5 SING Y N 2
VRM C1 C2 SING N N 3
VRM C2 C3 SING Y N 4
VRM N5 C4 SING Y N 5
VRM C4 C3 DOUB Y N 6
VRM C4 C8 SING N N 7
VRM C8 C13 DOUB Y N 8
VRM C8 C9 SING Y N 9
VRM C13 N12 SING Y N 10
VRM C9 C10 DOUB Y N 11
VRM N12 C11 DOUB Y N 12
VRM C10 C11 SING Y N 13
VRM C10 H101 SING N N 14
VRM C13 H131 SING N N 15
VRM C1 H13 SING N N 16
VRM C1 H12 SING N N 17
VRM C1 H11 SING N N 18
VRM C11 H111 SING N N 19
VRM C3 H31 SING N N 20
VRM C9 H91 SING N N 21
VRM N5 H1 SING N N 22
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VRM SMILES ACDLabs 12.01 "c1(cc(C)nn1)c2cnccc2"
VRM InChI InChI 1.03 "InChI=1S/C9H9N3/c1-7-5-9(12-11-7)8-3-2-4-10-6-8/h2-6H,1H3,(H,11,12)"
VRM InChIKey InChI 1.03 CGQOLRWLPQPKLV-UHFFFAOYSA-N
VRM SMILES_CANONICAL CACTVS 3.385 "Cc1cc([nH]n1)c2cccnc2"
VRM SMILES CACTVS 3.385 "Cc1cc([nH]n1)c2cccnc2"
VRM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc([nH]n1)c2cccnc2"
VRM SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc([nH]n1)c2cccnc2"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VRM "SYSTEMATIC NAME" ACDLabs 12.01 "3-(3-methyl-1H-pyrazol-5-yl)pyridine"
VRM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-(3-methyl-1~{H}-pyrazol-5-yl)pyridine"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VRM "Create component" 2020-09-11 RCSB
VRM "Initial release" 2021-01-20 RCSB
##