data_VUA # _chem_comp.id VUA _chem_comp.name "4-(4-methylpiperidin-1-yl)-N-(2-phenylethyl)pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H24 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-15 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.410 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VUA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7K41 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VUA N1 N1 N 0 1 Y N N -8.664 -10.998 12.805 0.318 -1.698 -0.127 N1 VUA 1 VUA N3 N2 N 0 1 N N N -8.790 -11.949 8.837 -3.532 -0.362 -0.362 N3 VUA 2 VUA C4 C1 C 0 1 Y N N -5.224 -10.303 11.564 5.418 0.588 1.284 C4 VUA 3 VUA C5 C2 C 0 1 Y N N -5.325 -9.313 9.400 5.544 0.530 -1.106 C5 VUA 4 VUA C6 C3 C 0 1 Y N N -9.055 -12.619 11.118 -1.962 -2.193 -0.234 C6 VUA 5 VUA C7 C4 C 0 1 Y N N -9.001 -12.235 12.433 -0.647 -2.606 -0.155 C7 VUA 6 VUA C8 C5 C 0 1 Y N N -5.499 -9.205 10.768 4.827 0.778 0.049 C8 VUA 7 VUA C10 C6 C 0 1 Y N N -8.368 -10.102 11.863 0.036 -0.404 -0.174 C10 VUA 8 VUA C13 C7 C 0 1 N N N -9.129 -13.266 8.296 -3.571 1.105 -0.400 C13 VUA 9 VUA C15 C8 C 0 1 N N N -10.141 -11.984 6.378 -5.901 1.050 0.495 C15 VUA 10 VUA C17 C9 C 0 1 N N N -5.998 -7.933 11.387 3.400 1.256 -0.038 C17 VUA 11 VUA C1 C10 C 0 1 Y N N -4.619 -11.581 9.613 7.446 -0.092 0.208 C1 VUA 12 VUA C2 C11 C 0 1 Y N N -4.785 -11.482 10.991 6.729 0.156 1.364 C2 VUA 13 VUA C3 C12 C 0 1 Y N N -4.891 -10.488 8.814 6.853 0.092 -1.026 C3 VUA 14 VUA C9 C13 C 0 1 Y N N -8.755 -11.629 10.207 -2.228 -0.822 -0.282 C9 VUA 15 VUA C11 C14 C 0 1 N N N -10.324 -13.108 7.380 -5.009 1.573 -0.635 C11 VUA 16 VUA C12 C15 C 0 1 N N N -9.779 -10.693 7.074 -5.805 -0.477 0.544 C12 VUA 17 VUA C14 C16 C 0 1 N N N -8.488 -10.931 7.844 -4.344 -0.886 0.744 C14 VUA 18 VUA C16 C17 C 0 1 N N N -11.415 -11.755 5.635 -7.351 1.463 0.234 C16 VUA 19 VUA C18 C18 C 0 1 N N N -7.544 -7.905 11.344 2.459 0.049 -0.058 C18 VUA 20 VUA N2 N3 N 0 1 Y N N -8.420 -10.380 10.550 -1.212 0.033 -0.250 N2 VUA 21 VUA N4 N4 N 0 1 N N N -7.991 -8.846 12.342 1.072 0.513 -0.142 N4 VUA 22 VUA H1 H1 H 0 1 N N N -5.353 -10.239 12.634 4.858 0.782 2.187 H1 VUA 23 VUA H2 H2 H 0 1 N N N -5.533 -8.458 8.774 5.082 0.678 -2.071 H2 VUA 24 VUA H3 H3 H 0 1 N N N -9.314 -13.624 10.818 -2.767 -2.913 -0.258 H3 VUA 25 VUA H4 H4 H 0 1 N N N -9.240 -12.960 13.197 -0.407 -3.658 -0.117 H4 VUA 26 VUA H5 H5 H 0 1 N N N -9.378 -13.953 9.118 -3.209 1.503 0.548 H5 VUA 27 VUA H6 H6 H 0 1 N N N -8.276 -13.667 7.729 -2.936 1.464 -1.211 H6 VUA 28 VUA H7 H7 H 0 1 N N N -9.343 -12.254 5.670 -5.568 1.467 1.445 H7 VUA 29 VUA H8 H8 H 0 1 N N N -5.660 -7.878 12.432 3.172 1.880 0.827 H8 VUA 30 VUA H9 H9 H 0 1 N N N -5.601 -7.073 10.827 3.266 1.836 -0.950 H9 VUA 31 VUA H10 H10 H 0 1 N N N -4.280 -12.506 9.171 8.470 -0.431 0.271 H10 VUA 32 VUA H11 H11 H 0 1 N N N -4.569 -12.334 11.619 7.192 0.012 2.329 H11 VUA 33 VUA H12 H12 H 0 1 N N N -4.766 -10.550 7.743 7.413 -0.102 -1.929 H12 VUA 34 VUA H13 H13 H 0 1 N N N -11.212 -12.894 7.992 -5.040 2.663 -0.648 H13 VUA 35 VUA H14 H14 H 0 1 N N N -10.475 -14.049 6.831 -5.366 1.187 -1.589 H14 VUA 36 VUA H15 H15 H 0 1 N N N -9.631 -9.895 6.331 -6.405 -0.853 1.373 H15 VUA 37 VUA H16 H16 H 0 1 N N N -10.582 -10.403 7.768 -6.175 -0.896 -0.392 H16 VUA 38 VUA H17 H17 H 0 1 N N N -7.698 -11.284 7.164 -4.270 -1.973 0.766 H17 VUA 39 VUA H18 H18 H 0 1 N N N -8.161 -10.003 8.336 -3.979 -0.479 1.687 H18 VUA 40 VUA H19 H19 H 0 1 N N N -11.708 -12.679 5.115 -7.986 1.085 1.036 H19 VUA 41 VUA H20 H20 H 0 1 N N N -12.206 -11.467 6.343 -7.418 2.550 0.199 H20 VUA 42 VUA H21 H21 H 0 1 N N N -11.271 -10.950 4.899 -7.682 1.048 -0.718 H21 VUA 43 VUA H22 H22 H 0 1 N N N -7.914 -6.896 11.578 2.687 -0.575 -0.922 H22 VUA 44 VUA H23 H23 H 0 1 N N N -7.903 -8.205 10.349 2.593 -0.531 0.855 H23 VUA 45 VUA H24 H24 H 0 1 N N N -7.246 -8.977 12.996 0.880 1.463 -0.175 H24 VUA 46 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VUA C16 C15 SING N N 1 VUA C15 C12 SING N N 2 VUA C15 C11 SING N N 3 VUA C12 C14 SING N N 4 VUA C11 C13 SING N N 5 VUA C14 N3 SING N N 6 VUA C13 N3 SING N N 7 VUA C3 C5 DOUB Y N 8 VUA C3 C1 SING Y N 9 VUA N3 C9 SING N N 10 VUA C5 C8 SING Y N 11 VUA C1 C2 DOUB Y N 12 VUA C9 N2 DOUB Y N 13 VUA C9 C6 SING Y N 14 VUA N2 C10 SING Y N 15 VUA C8 C17 SING N N 16 VUA C8 C4 DOUB Y N 17 VUA C2 C4 SING Y N 18 VUA C6 C7 DOUB Y N 19 VUA C18 C17 SING N N 20 VUA C18 N4 SING N N 21 VUA C10 N4 SING N N 22 VUA C10 N1 DOUB Y N 23 VUA C7 N1 SING Y N 24 VUA C4 H1 SING N N 25 VUA C5 H2 SING N N 26 VUA C6 H3 SING N N 27 VUA C7 H4 SING N N 28 VUA C13 H5 SING N N 29 VUA C13 H6 SING N N 30 VUA C15 H7 SING N N 31 VUA C17 H8 SING N N 32 VUA C17 H9 SING N N 33 VUA C1 H10 SING N N 34 VUA C2 H11 SING N N 35 VUA C3 H12 SING N N 36 VUA C11 H13 SING N N 37 VUA C11 H14 SING N N 38 VUA C12 H15 SING N N 39 VUA C12 H16 SING N N 40 VUA C14 H17 SING N N 41 VUA C14 H18 SING N N 42 VUA C16 H19 SING N N 43 VUA C16 H20 SING N N 44 VUA C16 H21 SING N N 45 VUA C18 H22 SING N N 46 VUA C18 H23 SING N N 47 VUA N4 H24 SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VUA SMILES ACDLabs 12.01 "n2ccc(N1CCC(CC1)C)nc2NCCc3ccccc3" VUA InChI InChI 1.03 "InChI=1S/C18H24N4/c1-15-9-13-22(14-10-15)17-8-12-20-18(21-17)19-11-7-16-5-3-2-4-6-16/h2-6,8,12,15H,7,9-11,13-14H2,1H3,(H,19,20,21)" VUA InChIKey InChI 1.03 FAHPWKWHSCNRBO-UHFFFAOYSA-N VUA SMILES_CANONICAL CACTVS 3.385 "CC1CCN(CC1)c2ccnc(NCCc3ccccc3)n2" VUA SMILES CACTVS 3.385 "CC1CCN(CC1)c2ccnc(NCCc3ccccc3)n2" VUA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1CCN(CC1)c2ccnc(n2)NCCc3ccccc3" VUA SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCN(CC1)c2ccnc(n2)NCCc3ccccc3" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VUA "SYSTEMATIC NAME" ACDLabs 12.01 "4-(4-methylpiperidin-1-yl)-N-(2-phenylethyl)pyrimidin-2-amine" VUA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-(4-methylpiperidin-1-yl)-~{N}-(2-phenylethyl)pyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VUA "Create component" 2020-09-15 RCSB VUA "Initial release" 2021-01-13 RCSB ##