data_VVE # _chem_comp.id VVE _chem_comp.name "3-chloro-5-{4-chloro-2-[2-(2-oxo-3-propanoyl-2,3-dihydro-1H-benzimidazol-1-yl)ethoxy]phenoxy}benzonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H19 Cl2 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-19 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.342 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VVE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8U6G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VVE C10 C1 C 0 1 Y N N N N N 47.457 -5.490 19.895 2.556 3.193 0.968 C10 VVE 1 VVE C15 C2 C 0 1 Y N N N N N 46.405 -4.192 25.164 4.156 -2.070 1.243 C15 VVE 2 VVE C11 C3 C 0 1 Y N N N N N 47.592 -5.915 21.202 2.682 1.883 0.545 C11 VVE 3 VVE C12 C4 C 0 1 Y N N N N N 46.598 -6.665 21.780 1.659 1.285 -0.174 C12 VVE 4 VVE C14 C5 C 0 1 Y N N N N N 46.269 -5.039 24.091 2.997 -1.388 0.914 C14 VVE 5 VVE C16 C6 C 0 1 Y N N N N N 47.072 -4.553 26.316 5.244 -2.041 0.394 C16 VVE 6 VVE C18 C7 C 0 1 N N N N N N 48.317 -6.222 27.602 6.304 -1.289 -1.684 C18 VVE 7 VVE C1 C8 C 0 1 N N N N N N 42.145 -14.786 18.430 -7.330 -0.811 2.300 C1 VVE 8 VVE C2 C9 C 0 1 N N N N N N 42.708 -13.805 19.447 -6.364 -0.188 1.291 C2 VVE 9 VVE C3 C10 C 0 1 N N N N N N 43.983 -13.678 20.211 -5.327 -1.206 0.893 C3 VVE 10 VVE O1 O1 O 0 1 N N N N N N 44.953 -14.431 20.115 -5.358 -2.320 1.370 O1 VVE 11 VVE N1 N1 N 0 1 N N N N N N 44.015 -12.514 21.067 -4.366 -0.879 0.007 N1 VVE 12 VVE C4 C11 C 0 1 N N N N N N 43.158 -11.429 20.875 -4.218 0.320 -0.589 C4 VVE 13 VVE O2 O2 O 0 1 N N N N N N 42.402 -11.228 19.941 -4.936 1.284 -0.410 O2 VVE 14 VVE N2 N2 N 0 1 N N N N N N 43.370 -10.577 21.912 -3.153 0.289 -1.412 N2 VVE 15 VVE C5 C12 C 0 1 N N N N N N 42.713 -9.280 21.930 -2.672 1.402 -2.234 C5 VVE 16 VVE C6 C13 C 0 1 N N N N N N 43.418 -8.317 20.991 -1.656 2.222 -1.437 C6 VVE 17 VVE O3 O3 O 0 1 N N N N N N 44.511 -7.750 21.715 -0.501 1.423 -1.172 O3 VVE 18 VVE C7 C14 C 0 1 Y N N N N N 45.444 -6.993 21.075 0.505 2.005 -0.468 C7 VVE 19 VVE C8 C15 C 0 1 Y N N N N N 45.312 -6.589 19.769 0.384 3.318 -0.041 C8 VVE 20 VVE C9 C16 C 0 1 Y N N N N N 46.318 -5.835 19.197 1.407 3.908 0.680 C9 VVE 21 VVE CL1 CL1 CL 0 0 N N N N N N 46.105 -5.329 17.540 1.254 5.552 1.215 CL1 VVE 22 VVE O4 O4 O 0 1 N N N N N N 46.665 -7.141 23.085 1.782 -0.004 -0.591 O4 VVE 23 VVE C13 C17 C 0 1 Y N N N N N 46.821 -6.300 24.174 2.922 -0.671 -0.272 C13 VVE 24 VVE CL2 CL2 CL 0 0 N N N N N N 45.681 -2.621 25.053 4.243 -2.959 2.732 CL2 VVE 25 VVE C17 C18 C 0 1 Y N N N N N 47.628 -5.822 26.401 5.177 -1.322 -0.801 C17 VVE 26 VVE N3 N3 N 0 1 N N N N N N 48.829 -6.517 28.586 7.198 -1.262 -2.384 N3 VVE 27 VVE C19 C19 C 0 1 Y N N N N N 47.493 -6.697 25.324 4.008 -0.635 -1.131 C19 VVE 28 VVE C20 C20 C 0 1 Y N N N N N 44.310 -11.085 22.791 -2.585 -0.982 -1.350 C20 VVE 29 VVE C21 C21 C 0 1 Y N N N N N 44.824 -10.566 23.965 -1.493 -1.568 -1.973 C21 VVE 30 VVE C22 C22 C 0 1 Y N N N N N 45.766 -11.335 24.635 -1.171 -2.883 -1.700 C22 VVE 31 VVE C23 C23 C 0 1 Y N N N N N 46.155 -12.572 24.146 -1.933 -3.619 -0.809 C23 VVE 32 VVE C24 C24 C 0 1 Y N N N N N 45.640 -13.090 22.961 -3.022 -3.043 -0.184 C24 VVE 33 VVE C25 C25 C 0 1 Y N N N N N 44.708 -12.324 22.286 -3.350 -1.722 -0.447 C25 VVE 34 VVE H1 H1 H 0 1 N N N N N N 48.230 -4.898 19.427 3.354 3.657 1.528 H1 VVE 35 VVE H2 H2 H 0 1 N N N N N N 48.476 -5.658 21.767 3.578 1.325 0.774 H2 VVE 36 VVE H3 H3 H 0 1 N N N N N N 45.742 -4.724 23.203 2.149 -1.414 1.582 H3 VVE 37 VVE H4 H4 H 0 1 N N N N N N 47.160 -3.859 27.139 6.147 -2.574 0.654 H4 VVE 38 VVE H5 H5 H 0 1 N N N N N N 41.135 -14.467 18.133 -6.776 -1.130 3.183 H5 VVE 39 VVE H6 H6 H 0 1 N N N N N N 42.797 -14.811 17.544 -8.080 -0.074 2.588 H6 VVE 40 VVE H7 H7 H 0 1 N N N N N N 42.096 -15.790 18.877 -7.821 -1.672 1.849 H7 VVE 41 VVE H8 H8 H 0 1 N N N N N N 42.652 -12.846 18.912 -6.917 0.132 0.407 H8 VVE 42 VVE H9 H9 H 0 1 N N N N N N 41.951 -13.825 20.245 -5.872 0.674 1.742 H9 VVE 43 VVE H10 H10 H 0 1 N N N N N N 42.739 -8.874 22.952 -2.198 1.012 -3.134 H10 VVE 44 VVE H11 H11 H 0 1 N N N N N N 41.667 -9.399 21.610 -3.513 2.038 -2.512 H11 VVE 45 VVE H12 H12 H 0 1 N N N N N N 42.725 -7.525 20.673 -1.365 3.100 -2.014 H12 VVE 46 VVE H13 H13 H 0 1 N N N N N N 43.790 -8.856 20.107 -2.103 2.539 -0.495 H13 VVE 47 VVE H14 H14 H 0 1 N N N N N N 44.435 -6.857 19.198 -0.510 3.879 -0.268 H14 VVE 48 VVE H15 H15 H 0 1 N N N N N N 47.913 -7.690 25.384 3.950 -0.078 -2.054 H15 VVE 49 VVE H16 H16 H 0 1 N N N N N N 44.507 -9.606 24.344 -0.897 -0.998 -2.669 H16 VVE 50 VVE H17 H17 H 0 1 N N N N N N 46.202 -10.964 25.551 -0.320 -3.340 -2.185 H17 VVE 51 VVE H18 H18 H 0 1 N N N N N N 46.879 -13.151 24.700 -1.675 -4.647 -0.601 H18 VVE 52 VVE H19 H19 H 0 1 N N N N N N 45.956 -14.052 22.584 -3.614 -3.620 0.511 H19 VVE 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VVE CL1 C9 SING N N 1 VVE C1 C2 SING N N 2 VVE C9 C8 DOUB Y N 3 VVE C9 C10 SING Y N 4 VVE C2 C3 SING N N 5 VVE C8 C7 SING Y N 6 VVE C10 C11 DOUB Y N 7 VVE O2 C4 DOUB N N 8 VVE O1 C3 DOUB N N 9 VVE C3 N1 SING N N 10 VVE C4 N1 SING N N 11 VVE C4 N2 SING N N 12 VVE C6 O3 SING N N 13 VVE C6 C5 SING N N 14 VVE N1 C25 SING N N 15 VVE C7 O3 SING N N 16 VVE C7 C12 DOUB Y N 17 VVE C11 C12 SING Y N 18 VVE C12 O4 SING N N 19 VVE N2 C5 SING N N 20 VVE N2 C20 SING N N 21 VVE C25 C20 DOUB Y N 22 VVE C25 C24 SING Y N 23 VVE C20 C21 SING Y N 24 VVE C24 C23 DOUB Y N 25 VVE O4 C13 SING N N 26 VVE C21 C22 DOUB Y N 27 VVE C14 C13 DOUB Y N 28 VVE C14 C15 SING Y N 29 VVE C23 C22 SING Y N 30 VVE C13 C19 SING Y N 31 VVE CL2 C15 SING N N 32 VVE C15 C16 DOUB Y N 33 VVE C19 C17 DOUB Y N 34 VVE C16 C17 SING Y N 35 VVE C17 C18 SING N N 36 VVE C18 N3 TRIP N N 37 VVE C10 H1 SING N N 38 VVE C11 H2 SING N N 39 VVE C14 H3 SING N N 40 VVE C16 H4 SING N N 41 VVE C1 H5 SING N N 42 VVE C1 H6 SING N N 43 VVE C1 H7 SING N N 44 VVE C2 H8 SING N N 45 VVE C2 H9 SING N N 46 VVE C5 H10 SING N N 47 VVE C5 H11 SING N N 48 VVE C6 H12 SING N N 49 VVE C6 H13 SING N N 50 VVE C8 H14 SING N N 51 VVE C19 H15 SING N N 52 VVE C21 H16 SING N N 53 VVE C22 H17 SING N N 54 VVE C23 H18 SING N N 55 VVE C24 H19 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VVE SMILES ACDLabs 12.01 "N#Cc1cc(cc(Cl)c1)Oc1ccc(Cl)cc1OCCN1c2ccccc2N(C(=O)CC)C1=O" VVE InChI InChI 1.06 "InChI=1S/C25H19Cl2N3O4/c1-2-24(31)30-21-6-4-3-5-20(21)29(25(30)32)9-10-33-23-14-17(26)7-8-22(23)34-19-12-16(15-28)11-18(27)13-19/h3-8,11-14H,2,9-10H2,1H3" VVE InChIKey InChI 1.06 LGSPOOOHYUJKNO-UHFFFAOYSA-N VVE SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1C(=O)N(CCOc2cc(Cl)ccc2Oc3cc(Cl)cc(c3)C#N)c4ccccc14" VVE SMILES CACTVS 3.385 "CCC(=O)N1C(=O)N(CCOc2cc(Cl)ccc2Oc3cc(Cl)cc(c3)C#N)c4ccccc14" VVE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1c2ccccc2N(C1=O)CCOc3cc(ccc3Oc4cc(cc(c4)Cl)C#N)Cl" VVE SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1c2ccccc2N(C1=O)CCOc3cc(ccc3Oc4cc(cc(c4)Cl)C#N)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VVE "SYSTEMATIC NAME" ACDLabs 12.01 "3-chloro-5-{4-chloro-2-[2-(2-oxo-3-propanoyl-2,3-dihydro-1H-benzimidazol-1-yl)ethoxy]phenoxy}benzonitrile" VVE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-chloranyl-5-[4-chloranyl-2-[2-(2-oxidanylidene-3-propanoyl-benzimidazol-1-yl)ethoxy]phenoxy]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VVE "Create component" 2023-09-19 RCSB VVE "Initial release" 2023-11-08 RCSB #