data_VVI # _chem_comp.id VVI _chem_comp.name "1-[4-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-5-cyano-pyridin-2-yl]-3-[5-bromanyl-6-(hydroxymethyl)-3-methoxy-pyridin-2-yl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H17 Br Cl2 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-22 _chem_comp.pdbx_modified_date 2024-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.207 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VVI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8KH6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VVI CAA C1 C 0 1 Y N N N N N 12.578 -5.793 28.152 -5.318 0.685 -0.301 CAA VVI 1 VVI CAB C2 C 0 1 Y N N N N N 11.906 -5.744 29.374 -6.319 -0.258 -0.168 CAB VVI 2 VVI CAC C3 C 0 1 Y N N N N N 10.519 -5.737 29.405 -5.989 -1.551 0.215 CAC VVI 3 VVI CAD C4 C 0 1 Y N N N N N 9.834 -5.782 28.202 -4.655 -1.850 0.453 CAD VVI 4 VVI CAE C5 C 0 1 Y N N N N N 10.534 -5.828 27.005 -3.699 -0.846 0.298 CAE VVI 5 VVI CAH C6 C 0 1 N N N N N N 13.980 -5.795 28.114 -5.671 2.090 -0.716 CAH VVI 6 VVI CAL C7 C 0 1 N N N N N N 10.313 -6.169 24.715 -1.424 -0.166 0.386 CAL VVI 7 VVI CAM C8 C 0 1 N N N N N N 7.850 -5.732 29.402 -5.326 -4.073 0.966 CAM VVI 8 VVI CAP C9 C 0 1 Y N N N N N 12.301 -6.755 23.559 0.846 0.524 0.359 CAP VVI 9 VVI CAQ C10 C 0 1 Y N N N N N 11.707 -7.543 22.566 2.188 0.195 0.494 CAQ VVI 10 VVI CAR C11 C 0 1 Y N N N N N 12.407 -7.916 21.422 3.150 1.162 0.239 CAR VVI 11 VVI CAS C12 C 0 1 Y N N N N N 13.742 -7.529 21.286 2.718 2.446 -0.149 CAS VVI 12 VVI CAT C13 C 0 1 Y N N N N N 14.333 -6.759 22.283 1.349 2.692 -0.261 CAT VVI 13 VVI CAW C14 C 0 1 N N R N N N 10.498 -9.172 20.544 4.821 -0.481 0.627 CAW VVI 14 VVI CAX C15 C 0 1 Y N N N N N 9.500 -8.364 19.953 6.128 -0.805 -0.049 CAX VVI 15 VVI CAY C16 C 0 1 N N N N N N 10.368 -10.572 19.935 4.964 -0.683 2.137 CAY VVI 16 VVI CAZ C17 C 0 1 Y N N N N N 8.323 -8.147 20.673 6.287 -1.987 -0.757 CAZ VVI 17 VVI CBA C18 C 0 1 Y N N N N N 7.294 -7.368 20.155 7.502 -2.250 -1.365 CBA VVI 18 VVI CBC C19 C 0 1 Y N N N N N 8.596 -7.031 18.149 8.383 -0.258 -0.616 CBC VVI 19 VVI CBD C20 C 0 1 Y N N N N N 9.626 -7.810 18.673 7.199 0.074 0.017 CBD VVI 20 VVI CBG C21 C 0 1 N N N N N N 14.514 -7.890 20.112 3.669 3.481 -0.424 CBG VVI 21 VVI NAF N1 N 0 1 Y N N N N N 11.880 -5.837 27.004 -4.057 0.374 -0.064 NAF VVI 22 VVI NAJ N2 N 0 1 N N N N N N 9.771 -5.868 25.906 -2.352 -1.131 0.533 NAJ VVI 23 VVI NAN N3 N 0 1 N N N N N N 11.650 -6.395 24.687 -0.124 -0.441 0.613 NAN VVI 24 VVI NAU N4 N 0 1 Y N N N N N 13.589 -6.390 23.422 0.473 1.744 -0.003 NAU VVI 25 VVI NBB N5 N 0 1 Y N N N N N 7.425 -6.807 18.882 8.500 -1.393 -1.276 NBB VVI 26 VVI NBH N6 N 0 1 N N N N N N 15.160 -8.185 19.140 4.423 4.302 -0.642 NBH VVI 27 VVI OAI O1 O 0 1 N N N N N N 14.467 -4.439 28.146 -5.935 2.878 0.447 OAI VVI 28 VVI OAK O2 O 0 1 N N N N N N 8.471 -5.781 28.111 -4.286 -3.103 0.830 OAK VVI 29 VVI OAO O3 O 0 1 N N N N N N 9.588 -6.214 23.716 -1.758 0.953 0.049 OAO VVI 30 VVI OAV O4 O 0 1 N N N N N N 11.862 -8.668 20.399 4.471 0.879 0.360 OAV VVI 31 VVI BRAG BR1 BR 0 0 N N N N N N 12.858 -5.681 31.006 -8.120 0.209 -0.504 BRAG VVI 32 VVI CLBE CL1 CL 0 0 N N N N N N 11.055 -8.042 17.696 7.056 1.572 0.884 CLBE VVI 33 VVI CLBF CL2 CL 0 0 N N N N N N 8.137 -8.840 22.246 4.979 -3.122 -0.879 CLBF VVI 34 VVI H1 H1 H 0 1 N N N N N N 9.987 -5.697 30.344 -6.753 -2.306 0.326 H1 VVI 35 VVI H2 H2 H 0 1 N N N N N N 14.320 -6.284 27.190 -4.838 2.525 -1.269 H2 VVI 36 VVI H3 H3 H 0 1 N N N N N N 14.369 -6.344 28.984 -6.557 2.069 -1.350 H3 VVI 37 VVI H4 H4 H 0 1 N N N N N N 6.756 -5.733 29.284 -5.837 -4.194 0.011 H4 VVI 38 VVI H5 H5 H 0 1 N N N N N N 8.156 -6.610 29.989 -4.896 -5.027 1.271 H5 VVI 39 VVI H6 H6 H 0 1 N N N N N N 8.161 -4.815 29.924 -6.039 -3.739 1.720 H6 VVI 40 VVI H7 H7 H 0 1 N N N N N N 10.685 -7.868 22.690 2.480 -0.800 0.794 H7 VVI 41 VVI H8 H8 H 0 1 N N N N N N 15.361 -6.444 22.184 1.005 3.672 -0.557 H8 VVI 42 VVI H9 H9 H 0 1 N N N N N N 10.283 -9.265 21.619 4.041 -1.138 0.245 H9 VVI 43 VVI H10 H10 H 0 1 N N N N N N 11.131 -11.234 20.371 4.018 -0.448 2.626 H10 VVI 44 VVI H11 H11 H 0 1 N N N N N N 9.367 -10.974 20.151 5.231 -1.720 2.341 H11 VVI 45 VVI H12 H12 H 0 1 N N N N N N 10.513 -10.513 18.846 5.744 -0.025 2.520 H12 VVI 46 VVI H13 H13 H 0 1 N N N N N N 6.398 -7.198 20.734 7.634 -3.168 -1.918 H13 VVI 47 VVI H14 H14 H 0 1 N N N N N N 8.703 -6.595 17.167 9.222 0.421 -0.570 H14 VVI 48 VVI H15 H15 H 0 1 N N N N N N 8.792 -5.673 25.972 -2.085 -2.024 0.803 H15 VVI 49 VVI H16 H16 H 0 1 N N N N N N 12.174 -6.291 25.533 0.135 -1.311 0.953 H16 VVI 50 VVI H17 H17 H 0 1 N N N N N N 15.417 -4.442 28.120 -6.169 3.796 0.254 H17 VVI 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VVI CLBE CBD SING N N 1 VVI CBC CBD DOUB Y N 2 VVI CBC NBB SING Y N 3 VVI CBD CAX SING Y N 4 VVI NBB CBA DOUB Y N 5 VVI NBH CBG TRIP N N 6 VVI CAY CAW SING N N 7 VVI CAX CAW SING N N 8 VVI CAX CAZ DOUB Y N 9 VVI CBG CAS SING N N 10 VVI CBA CAZ SING Y N 11 VVI OAV CAW SING N N 12 VVI OAV CAR SING N N 13 VVI CAZ CLBF SING N N 14 VVI CAS CAR DOUB Y N 15 VVI CAS CAT SING Y N 16 VVI CAR CAQ SING Y N 17 VVI CAT NAU DOUB Y N 18 VVI CAQ CAP DOUB Y N 19 VVI NAU CAP SING Y N 20 VVI CAP NAN SING N N 21 VVI OAO CAL DOUB N N 22 VVI NAN CAL SING N N 23 VVI CAL NAJ SING N N 24 VVI NAJ CAE SING N N 25 VVI NAF CAE DOUB Y N 26 VVI NAF CAA SING Y N 27 VVI CAE CAD SING Y N 28 VVI OAK CAD SING N N 29 VVI OAK CAM SING N N 30 VVI CAH OAI SING N N 31 VVI CAH CAA SING N N 32 VVI CAA CAB DOUB Y N 33 VVI CAD CAC DOUB Y N 34 VVI CAB CAC SING Y N 35 VVI CAB BRAG SING N N 36 VVI CAC H1 SING N N 37 VVI CAH H2 SING N N 38 VVI CAH H3 SING N N 39 VVI CAM H4 SING N N 40 VVI CAM H5 SING N N 41 VVI CAM H6 SING N N 42 VVI CAQ H7 SING N N 43 VVI CAT H8 SING N N 44 VVI CAW H9 SING N N 45 VVI CAY H10 SING N N 46 VVI CAY H11 SING N N 47 VVI CAY H12 SING N N 48 VVI CBA H13 SING N N 49 VVI CBC H14 SING N N 50 VVI NAJ H15 SING N N 51 VVI NAN H16 SING N N 52 VVI OAI H17 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VVI InChI InChI 1.06 "InChI=1S/C21H17BrCl2N6O4/c1-10(19-13(23)7-26-8-14(19)24)34-16-4-18(27-6-11(16)5-25)29-21(32)30-20-17(33-2)3-12(22)15(9-31)28-20/h3-4,6-8,10,31H,9H2,1-2H3,(H2,27,28,29,30,32)/t10-/m1/s1" VVI InChIKey InChI 1.06 QPFZVILXPYACRC-SNVBAGLBSA-N VVI SMILES_CANONICAL CACTVS 3.385 "COc1cc(Br)c(CO)nc1NC(=O)Nc2cc(O[C@H](C)c3c(Cl)cncc3Cl)c(cn2)C#N" VVI SMILES CACTVS 3.385 "COc1cc(Br)c(CO)nc1NC(=O)Nc2cc(O[CH](C)c3c(Cl)cncc3Cl)c(cn2)C#N" VVI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1c(cncc1Cl)Cl)Oc2cc(ncc2C#N)NC(=O)Nc3c(cc(c(n3)CO)Br)OC" VVI SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1c(cncc1Cl)Cl)Oc2cc(ncc2C#N)NC(=O)Nc3c(cc(c(n3)CO)Br)OC" # _pdbx_chem_comp_identifier.comp_id VVI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[4-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-5-cyano-pyridin-2-yl]-3-[5-bromanyl-6-(hydroxymethyl)-3-methoxy-pyridin-2-yl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VVI "Create component" 2023-08-22 PDBJ VVI "Initial release" 2024-07-31 RCSB #