data_VVL # _chem_comp.id VVL _chem_comp.name "6-benzyl-1,2,4-triazine-3,5(2H,4H)-dithione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H9 N3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-09 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 235.329 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VVL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FYG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VVL C01 C1 C 0 1 N N N 3.326 6.440 18.286 -0.142 0.519 -0.001 C01 VVL 1 VVL C02 C2 C 0 1 N N N 3.509 5.036 18.029 -1.463 1.149 -0.001 C02 VVL 2 VVL C07 C3 C 0 1 Y N N 3.451 7.051 20.625 2.318 0.466 -0.001 C07 VVL 3 VVL C10 C4 C 0 1 Y N N 3.417 6.159 21.663 2.874 0.056 -1.198 C10 VVL 4 VVL C11 C5 C 0 1 Y N N 4.444 8.060 20.730 2.877 0.059 1.196 C11 VVL 5 VVL C13 C6 C 0 1 Y N N 4.246 6.284 22.785 3.989 -0.761 -1.198 C13 VVL 6 VVL C15 C7 C 0 1 Y N N 5.237 7.258 22.893 4.548 -1.168 -0.001 C15 VVL 7 VVL C03 C8 C 0 1 N N N 2.493 6.932 19.417 1.106 1.363 -0.000 C03 VVL 8 VVL N04 N1 N 0 1 N N N 3.950 7.343 17.557 -0.061 -0.783 0.003 N04 VVL 9 VVL N05 N2 N 0 1 N N N 4.442 4.663 17.087 -2.564 0.370 -0.002 N05 VVL 10 VVL S06 S1 S 0 1 N N N 2.669 3.871 18.864 -1.610 2.855 0.000 S06 VVL 11 VVL N08 N3 N 0 1 N N N 4.835 6.919 16.596 -1.229 -1.554 0.008 N08 VVL 12 VVL C09 C9 C 0 1 N N N 5.140 5.571 16.374 -2.441 -0.971 -0.002 C09 VVL 13 VVL S12 S2 S 0 1 N N N 6.298 5.197 15.245 -3.847 -1.947 -0.002 S12 VVL 14 VVL C14 C10 C 0 1 Y N N 5.326 8.147 21.824 3.991 -0.758 1.196 C14 VVL 15 VVL H20 H1 H 0 1 N N N 2.727 5.330 21.615 2.437 0.374 -2.133 H20 VVL 16 VVL H21 H2 H 0 1 N N N 4.526 8.790 19.939 2.442 0.380 2.132 H21 VVL 17 VVL H22 H3 H 0 1 N N N 4.111 5.594 23.604 4.423 -1.082 -2.134 H22 VVL 18 VVL H24 H4 H 0 1 N N N 5.893 7.320 23.749 5.418 -1.807 -0.001 H24 VVL 19 VVL H16 H5 H 0 1 N N N 2.059 7.913 19.174 1.120 1.992 -0.890 H16 VVL 20 VVL H17 H6 H 0 1 N N N 1.686 6.218 19.637 1.120 1.991 0.890 H17 VVL 21 VVL H18 H7 H 0 1 N N N 4.607 3.690 16.927 -3.445 0.775 -0.001 H18 VVL 22 VVL H19 H8 H 0 1 N N N 5.284 7.608 16.027 -1.164 -2.522 0.012 H19 VVL 23 VVL H23 H9 H 0 1 N N N 6.084 8.916 21.835 4.428 -1.076 2.131 H23 VVL 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VVL C01 C02 SING N N 1 VVL C01 C03 SING N N 2 VVL C01 N04 DOUB N N 3 VVL C02 N05 SING N N 4 VVL C02 S06 DOUB N N 5 VVL C03 C07 SING N N 6 VVL N04 N08 SING N N 7 VVL N05 C09 SING N N 8 VVL N08 C09 SING N N 9 VVL C07 C10 DOUB Y N 10 VVL C07 C11 SING Y N 11 VVL C09 S12 DOUB N N 12 VVL C10 C13 SING Y N 13 VVL C11 C14 DOUB Y N 14 VVL C13 C15 DOUB Y N 15 VVL C14 C15 SING Y N 16 VVL C10 H20 SING N N 17 VVL C11 H21 SING N N 18 VVL C13 H22 SING N N 19 VVL C15 H24 SING N N 20 VVL C03 H16 SING N N 21 VVL C03 H17 SING N N 22 VVL N05 H18 SING N N 23 VVL N08 H19 SING N N 24 VVL C14 H23 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VVL SMILES ACDLabs 12.01 "S=C1NC(=S)C(Cc2ccccc2)=NN1" VVL InChI InChI 1.06 "InChI=1S/C10H9N3S2/c14-9-8(12-13-10(15)11-9)6-7-4-2-1-3-5-7/h1-5H,6H2,(H2,11,13,14,15)" VVL InChIKey InChI 1.06 LJIJCOCWWHDFLK-UHFFFAOYSA-N VVL SMILES_CANONICAL CACTVS 3.385 "S=C1NN=C(Cc2ccccc2)C(=S)N1" VVL SMILES CACTVS 3.385 "S=C1NN=C(Cc2ccccc2)C(=S)N1" VVL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NNC(=S)NC2=S" VVL SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NNC(=S)NC2=S" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VVL "SYSTEMATIC NAME" ACDLabs 12.01 "6-benzyl-1,2,4-triazine-3,5(2H,4H)-dithione" VVL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(phenylmethyl)-2~{H}-1,2,4-triazine-3,5-dithione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VVL "Create component" 2023-05-09 RCSB VVL "Initial release" 2023-06-14 RCSB #