data_VWJ # _chem_comp.id VWJ _chem_comp.name "N-(propan-2-yl)-1H-benzimidazol-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-17 _chem_comp.pdbx_modified_date 2020-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 175.230 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VWJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5RLV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VWJ N1 N1 N 0 1 N N N -9.790 -1.012 -75.690 -2.070 -0.768 0.004 N1 VWJ 1 VWJ N3 N2 N 0 1 Y N N -9.285 1.218 -76.286 -0.169 0.740 0.208 N3 VWJ 2 VWJ C4 C1 C 0 1 Y N N -8.937 -0.092 -76.192 -0.718 -0.495 0.016 C4 VWJ 3 VWJ C5 C2 C 0 1 Y N N -7.214 0.900 -76.981 1.443 -0.772 -0.092 C5 VWJ 4 VWJ C6 C3 C 0 1 Y N N -5.967 1.239 -77.493 2.756 -1.234 -0.207 C6 VWJ 5 VWJ C7 C4 C 0 1 Y N N -5.745 2.557 -77.811 3.805 -0.349 -0.088 C7 VWJ 6 VWJ C8 C5 C 0 1 Y N N -6.729 3.526 -77.628 3.566 0.999 0.134 C8 VWJ 7 VWJ C10 C6 C 0 1 Y N N -8.191 1.884 -76.803 1.207 0.592 0.144 C10 VWJ 8 VWJ C1 C7 C 0 1 N N N -8.946 -3.317 -75.672 -3.308 1.007 -1.136 C1 VWJ 9 VWJ C2 C8 C 0 1 N N N -10.003 -2.370 -76.209 -3.037 0.315 0.201 C2 VWJ 10 VWJ C3 C9 C 0 1 N N N -10.063 -2.371 -77.727 -4.344 -0.262 0.750 C3 VWJ 11 VWJ N2 N3 N 0 1 Y N N -7.700 -0.339 -76.575 0.230 -1.383 -0.155 N2 VWJ 12 VWJ C9 C10 C 0 1 Y N N -7.969 3.211 -77.122 2.274 1.470 0.255 C9 VWJ 13 VWJ H1 H1 H 0 1 N N N -10.690 -0.577 -75.718 -2.380 -1.675 -0.140 H1 VWJ 14 VWJ H2 H2 H 0 1 N N N -10.163 1.622 -76.030 -0.652 1.568 0.357 H2 VWJ 15 VWJ H3 H3 H 0 1 N N N -5.200 0.493 -77.636 2.948 -2.281 -0.388 H3 VWJ 16 VWJ H4 H4 H 0 1 N N N -4.786 2.849 -78.212 4.820 -0.705 -0.181 H4 VWJ 17 VWJ H5 H5 H 0 1 N N N -6.513 4.551 -77.890 4.397 1.683 0.226 H5 VWJ 18 VWJ H6 H6 H 0 1 N N N -8.943 -3.279 -74.573 -4.028 1.812 -0.989 H6 VWJ 19 VWJ H7 H7 H 0 1 N N N -9.170 -4.342 -76.003 -2.377 1.418 -1.527 H7 VWJ 20 VWJ H8 H8 H 0 1 N N N -7.958 -3.017 -76.052 -3.712 0.284 -1.845 H8 VWJ 21 VWJ H9 H9 H 0 1 N N N -10.978 -2.724 -75.842 -2.634 1.038 0.910 H9 VWJ 22 VWJ H10 H10 H 0 1 N N N -10.223 -3.398 -78.087 -4.151 -0.756 1.703 H10 VWJ 23 VWJ H11 H11 H 0 1 N N N -10.893 -1.732 -78.061 -5.063 0.543 0.897 H11 VWJ 24 VWJ H12 H12 H 0 1 N N N -9.116 -1.984 -78.132 -4.747 -0.986 0.041 H12 VWJ 25 VWJ H14 H14 H 0 1 N N N -8.731 3.963 -76.981 2.095 2.519 0.437 H14 VWJ 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VWJ C7 C8 DOUB Y N 1 VWJ C7 C6 SING Y N 2 VWJ C3 C2 SING N N 3 VWJ C8 C9 SING Y N 4 VWJ C6 C5 DOUB Y N 5 VWJ C9 C10 DOUB Y N 6 VWJ C5 C10 SING Y N 7 VWJ C5 N2 SING Y N 8 VWJ C10 N3 SING Y N 9 VWJ N2 C4 DOUB Y N 10 VWJ N3 C4 SING Y N 11 VWJ C2 N1 SING N N 12 VWJ C2 C1 SING N N 13 VWJ C4 N1 SING N N 14 VWJ N1 H1 SING N N 15 VWJ N3 H2 SING N N 16 VWJ C6 H3 SING N N 17 VWJ C7 H4 SING N N 18 VWJ C8 H5 SING N N 19 VWJ C1 H6 SING N N 20 VWJ C1 H7 SING N N 21 VWJ C1 H8 SING N N 22 VWJ C2 H9 SING N N 23 VWJ C3 H10 SING N N 24 VWJ C3 H11 SING N N 25 VWJ C3 H12 SING N N 26 VWJ C9 H14 SING N N 27 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VWJ SMILES ACDLabs 12.01 "N(c1nc2c(n1)cccc2)C(C)C" VWJ InChI InChI 1.03 "InChI=1S/C10H13N3/c1-7(2)11-10-12-8-5-3-4-6-9(8)13-10/h3-7H,1-2H3,(H2,11,12,13)" VWJ InChIKey InChI 1.03 KRNAPWQWOXYDPY-UHFFFAOYSA-N VWJ SMILES_CANONICAL CACTVS 3.385 "CC(C)Nc1[nH]c2ccccc2n1" VWJ SMILES CACTVS 3.385 "CC(C)Nc1[nH]c2ccccc2n1" VWJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)Nc1[nH]c2ccccc2n1" VWJ SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)Nc1[nH]c2ccccc2n1" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VWJ "SYSTEMATIC NAME" ACDLabs 12.01 "N-(propan-2-yl)-1H-benzimidazol-2-amine" VWJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-propan-2-yl-1~{H}-benzimidazol-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VWJ "Create component" 2020-09-17 RCSB VWJ "Initial release" 2020-09-30 RCSB ##