data_VX6
#
_chem_comp.id VX6
_chem_comp.name "CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H28 N8 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2005-12-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 464.586
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VX6
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2F4J
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VX6 N1 N1 N 0 1 N N N 4.048 -5.701 -32.333 6.526 1.594 -0.925 N1 VX6 1
VX6 C2 C2 C 0 1 N N N 4.863 -5.204 -31.177 6.175 0.173 -0.814 C2 VX6 2
VX6 C3 C3 C 0 1 N N N 4.790 -6.119 -29.950 4.654 0.023 -0.748 C3 VX6 3
VX6 N4 N4 N 0 1 N N N 3.373 -6.621 -29.509 4.145 0.684 0.460 N4 VX6 4
VX6 C5 C5 C 0 1 N N N 2.480 -6.945 -30.720 4.497 2.105 0.349 C5 VX6 5
VX6 C6 C6 C 0 1 N N N 2.647 -5.978 -31.939 6.017 2.255 0.283 C6 VX6 6
VX6 C7 C7 C 0 1 N N N 4.161 -4.762 -33.515 7.992 1.672 -0.864 C7 VX6 7
VX6 C8 C8 C 0 1 Y N N 2.941 -6.829 -28.148 2.762 0.610 0.402 C8 VX6 8
VX6 C9 C9 C 0 1 Y N N 1.735 -7.607 -27.825 2.118 -0.621 0.483 C9 VX6 9
VX6 C10 C10 C 0 1 Y N N 1.404 -7.764 -26.439 0.728 -0.647 0.420 C10 VX6 10
VX6 N11 N11 N 0 1 Y N N 2.229 -7.197 -25.523 0.064 0.499 0.286 N11 VX6 11
VX6 C12 C12 C 0 1 Y N N 3.300 -6.496 -25.867 0.711 1.653 0.212 C12 VX6 12
VX6 N13 N13 N 0 1 Y N N 3.671 -6.297 -27.123 2.033 1.716 0.274 N13 VX6 13
VX6 N14 N14 N 0 1 N N N 0.281 -8.483 -26.123 0.043 -1.851 0.497 N14 VX6 14
VX6 C15 C15 C 0 1 Y N N -0.318 -8.938 -24.880 0.740 -3.055 0.423 C15 VX6 15
VX6 C17 C17 C 0 1 Y N N 0.114 -8.602 -23.587 1.928 -3.260 -0.210 C17 VX6 16
VX6 C18 C18 C 0 1 Y N N -0.765 -9.246 -22.720 2.277 -4.603 -0.041 C18 VX6 17
VX6 N19 N19 N 0 1 Y N N -1.715 -9.964 -23.462 1.339 -5.190 0.657 N19 VX6 18
VX6 N20 N20 N 0 1 Y N N -1.439 -9.774 -24.775 0.356 -4.240 0.964 N20 VX6 19
VX6 C21 C21 C 0 1 N N N -0.783 -9.229 -21.208 3.521 -5.264 -0.577 C21 VX6 20
VX6 S23 S23 S 0 1 N N N 4.282 -5.776 -24.527 -0.212 3.144 0.035 S23 VX6 21
VX6 C24 C24 C 0 1 Y N N 3.587 -6.260 -23.017 -1.850 2.508 0.169 C24 VX6 22
VX6 C25 C25 C 0 1 Y N N 2.860 -5.339 -22.252 -2.423 2.324 1.421 C25 VX6 23
VX6 C26 C26 C 0 1 Y N N 2.250 -5.770 -21.034 -3.706 1.826 1.526 C26 VX6 24
VX6 C27 C27 C 0 1 Y N N 2.378 -7.094 -20.602 -4.424 1.510 0.380 C27 VX6 25
VX6 C28 C28 C 0 1 Y N N 3.118 -8.023 -21.380 -3.851 1.694 -0.871 C28 VX6 26
VX6 C29 C29 C 0 1 Y N N 3.736 -7.575 -22.613 -2.570 2.196 -0.977 C29 VX6 27
VX6 N30 N30 N 0 1 N N N 1.761 -7.560 -19.391 -5.727 1.005 0.487 N30 VX6 28
VX6 C31 C31 C 0 1 N N N 1.701 -8.761 -18.743 -6.172 0.096 -0.403 C31 VX6 29
VX6 O32 O32 O 0 1 N N N 2.216 -9.805 -19.137 -5.414 -0.365 -1.230 O32 VX6 30
VX6 C33 C33 C 0 1 N N N 0.885 -8.737 -17.450 -7.612 -0.347 -0.370 C33 VX6 31
VX6 C34 C34 C 0 1 N N N -0.602 -9.266 -17.389 -8.057 -1.381 -1.407 C34 VX6 32
VX6 C35 C35 C 0 1 N N N 0.487 -9.810 -16.432 -7.899 -1.787 0.060 C35 VX6 33
VX6 H21 1H2 H 0 1 N N N 4.455 -4.226 -30.883 6.555 -0.364 -1.683 H21 VX6 34
VX6 H22 2H2 H 0 1 N N N 5.913 -5.141 -31.498 6.620 -0.241 0.091 H22 VX6 35
VX6 H31 1H3 H 0 1 N N N 5.149 -5.504 -29.112 4.395 -1.035 -0.719 H31 VX6 36
VX6 H32 2H3 H 0 1 N N N 5.389 -7.013 -30.181 4.206 0.482 -1.629 H32 VX6 37
VX6 H51 1H5 H 0 1 N N N 1.440 -6.838 -30.378 4.117 2.642 1.218 H51 VX6 38
VX6 H52 2H5 H 0 1 N N N 2.734 -7.960 -31.061 4.052 2.519 -0.556 H52 VX6 39
VX6 H61 1H6 H 0 1 N N N 2.177 -6.478 -32.798 6.466 1.796 1.164 H61 VX6 40
VX6 H62 2H6 H 0 1 N N N 2.180 -5.019 -31.670 6.277 3.313 0.254 H62 VX6 41
VX6 H71 1H7 H 0 1 N N N 3.293 -4.899 -34.176 8.345 1.165 0.034 H71 VX6 42
VX6 H72 2H7 H 0 1 N N N 5.084 -4.982 -34.071 8.419 1.192 -1.744 H72 VX6 43
VX6 H73 3H7 H 0 1 N N N 4.188 -3.722 -33.157 8.299 2.718 -0.835 H73 VX6 44
VX6 H9 H9 H 0 1 N N N 1.123 -8.043 -28.601 2.683 -1.535 0.591 H9 VX6 45
VX6 H14 H14 H 0 1 N N N -0.244 -8.756 -26.929 -0.921 -1.854 0.602 H14 VX6 46
VX6 H17 H17 H 0 1 N N N 0.952 -7.975 -23.321 2.502 -2.516 -0.743 H17 VX6 47
VX6 H20 H20 H 0 1 N N N -1.949 -10.165 -25.541 -0.454 -4.400 1.472 H20 VX6 48
VX6 H211 1H21 H 0 0 N N N -1.306 -10.123 -20.838 3.322 -5.658 -1.574 H211 VX6 49
VX6 H212 2H21 H 0 0 N N N -1.306 -8.327 -20.858 4.327 -4.532 -0.630 H212 VX6 50
VX6 H213 3H21 H 0 0 N N N 0.249 -9.225 -20.829 3.813 -6.079 0.085 H213 VX6 51
VX6 H25 H25 H 0 1 N N N 2.762 -4.314 -22.579 -1.864 2.570 2.312 H25 VX6 52
VX6 H26 H26 H 0 1 N N N 1.684 -5.066 -20.441 -4.152 1.683 2.499 H26 VX6 53
VX6 H28 H28 H 0 1 N N N 3.219 -9.049 -21.058 -4.410 1.447 -1.762 H28 VX6 54
VX6 H29 H29 H 0 1 N N N 4.310 -8.265 -23.214 -2.124 2.339 -1.951 H29 VX6 55
VX6 H30 H30 H 0 1 N N N 1.260 -6.839 -18.912 -6.308 1.310 1.201 H30 VX6 56
VX6 H33 H33 H 0 1 N N N 1.471 -7.814 -17.325 -8.333 0.418 -0.081 H33 VX6 57
VX6 H341 1H34 H 0 0 N N N -1.331 -9.689 -18.096 -9.070 -1.297 -1.799 H341 VX6 58
VX6 H342 2H34 H 0 0 N N N -1.554 -8.751 -17.196 -7.308 -1.741 -2.112 H342 VX6 59
VX6 H351 1H35 H 0 0 N N N 0.581 -9.922 -15.342 -7.046 -2.414 0.319 H351 VX6 60
VX6 H352 2H35 H 0 0 N N N 0.865 -10.835 -16.302 -8.808 -1.970 0.632 H352 VX6 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VX6 N1 C2 SING N N 1
VX6 N1 C6 SING N N 2
VX6 N1 C7 SING N N 3
VX6 C2 C3 SING N N 4
VX6 C2 H21 SING N N 5
VX6 C2 H22 SING N N 6
VX6 C3 N4 SING N N 7
VX6 C3 H31 SING N N 8
VX6 C3 H32 SING N N 9
VX6 N4 C5 SING N N 10
VX6 N4 C8 SING N N 11
VX6 C5 C6 SING N N 12
VX6 C5 H51 SING N N 13
VX6 C5 H52 SING N N 14
VX6 C6 H61 SING N N 15
VX6 C6 H62 SING N N 16
VX6 C7 H71 SING N N 17
VX6 C7 H72 SING N N 18
VX6 C7 H73 SING N N 19
VX6 C8 C9 SING Y N 20
VX6 C8 N13 DOUB Y N 21
VX6 C9 C10 DOUB Y N 22
VX6 C9 H9 SING N N 23
VX6 C10 N11 SING Y N 24
VX6 C10 N14 SING N N 25
VX6 N11 C12 DOUB Y N 26
VX6 C12 N13 SING Y N 27
VX6 C12 S23 SING N N 28
VX6 N14 C15 SING N N 29
VX6 N14 H14 SING N N 30
VX6 C15 C17 DOUB Y N 31
VX6 C15 N20 SING Y N 32
VX6 C17 C18 SING Y N 33
VX6 C17 H17 SING N N 34
VX6 C18 N19 DOUB Y N 35
VX6 C18 C21 SING N N 36
VX6 N19 N20 SING Y N 37
VX6 N20 H20 SING N N 38
VX6 C21 H211 SING N N 39
VX6 C21 H212 SING N N 40
VX6 C21 H213 SING N N 41
VX6 S23 C24 SING N N 42
VX6 C24 C25 SING Y N 43
VX6 C24 C29 DOUB Y N 44
VX6 C25 C26 DOUB Y N 45
VX6 C25 H25 SING N N 46
VX6 C26 C27 SING Y N 47
VX6 C26 H26 SING N N 48
VX6 C27 C28 DOUB Y N 49
VX6 C27 N30 SING N N 50
VX6 C28 C29 SING Y N 51
VX6 C28 H28 SING N N 52
VX6 C29 H29 SING N N 53
VX6 N30 C31 SING N N 54
VX6 N30 H30 SING N N 55
VX6 C31 O32 DOUB N N 56
VX6 C31 C33 SING N N 57
VX6 C33 C34 SING N N 58
VX6 C33 C35 SING N N 59
VX6 C33 H33 SING N N 60
VX6 C34 C35 SING N N 61
VX6 C34 H341 SING N N 62
VX6 C34 H342 SING N N 63
VX6 C35 H351 SING N N 64
VX6 C35 H352 SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VX6 SMILES ACDLabs 10.04 "O=C(Nc4ccc(Sc2nc(N1CCN(C)CC1)cc(n2)Nc3cc(nn3)C)cc4)C5CC5"
VX6 SMILES_CANONICAL CACTVS 3.341 "CN1CCN(CC1)c2cc(Nc3[nH]nc(C)c3)nc(Sc4ccc(NC(=O)C5CC5)cc4)n2"
VX6 SMILES CACTVS 3.341 "CN1CCN(CC1)c2cc(Nc3[nH]nc(C)c3)nc(Sc4ccc(NC(=O)C5CC5)cc4)n2"
VX6 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1cc([nH]n1)Nc2cc(nc(n2)Sc3ccc(cc3)NC(=O)C4CC4)N5CCN(CC5)C"
VX6 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1cc([nH]n1)Nc2cc(nc(n2)Sc3ccc(cc3)NC(=O)C4CC4)N5CCN(CC5)C"
VX6 InChI InChI 1.03 "InChI=1S/C23H28N8OS/c1-15-13-20(29-28-15)25-19-14-21(31-11-9-30(2)10-12-31)27-23(26-19)33-18-7-5-17(6-8-18)24-22(32)16-3-4-16/h5-8,13-14,16H,3-4,9-12H2,1-2H3,(H,24,32)(H2,25,26,27,28,29)"
VX6 InChIKey InChI 1.03 GCIKSSRWRFVXBI-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VX6 "SYSTEMATIC NAME" ACDLabs 10.04 "N-[4-({4-(4-methylpiperazin-1-yl)-6-[(3-methyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}sulfanyl)phenyl]cyclopropanecarboxamide"
VX6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[4-[4-(4-methylpiperazin-1-yl)-6-[(5-methyl-2H-pyrazol-3-yl)amino]pyrimidin-2-yl]sulfanylphenyl]cyclopropanecarboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VX6 "Create component" 2005-12-08 RCSB
VX6 "Modify descriptor" 2011-06-04 RCSB
#