data_VXT # _chem_comp.id VXT _chem_comp.name "2-(hydroxymethyl)-1-[6-[4-[[3-[[3-[6-[(2~{S},3~{R},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-1-yl]hexyl]-1,2,3-triazol-4-yl]methoxy]-2,2-bis[[1-[6-[2-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-1-yl]hexyl]-1,2,3-triazol-4-yl]methoxymethyl]propoxy]methyl]-1,2,3-triazol-1-yl]hexyl]pyrrolidine-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C61 H108 N16 O16" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-20 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1321.608 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VXT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QKW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VXT C1 C1 C 0 1 N N N N N N 1.979 -31.545 23.800 -9.669 -0.252 -3.476 C1 VXT 1 VXT N1 N1 N 0 1 N N N N N N 2.920 -32.212 24.692 -10.762 0.700 -3.237 N1 VXT 2 VXT C17 C17 C 0 1 N N N N N N 4.154 -32.732 24.078 -10.406 1.659 -2.171 C17 VXT 3 VXT C18 C18 C 0 1 N N S N N N 4.758 -33.520 25.231 -11.741 1.959 -1.445 C18 VXT 4 VXT C19 C19 C 0 1 N N R N N N 3.533 -34.284 25.739 -12.434 0.571 -1.479 C19 VXT 5 VXT C20 C20 C 0 1 N N S N N N 2.381 -33.244 25.656 -11.998 -0.002 -2.843 C20 VXT 6 VXT C26 C26 C 0 1 N N N N N N 2.363 -30.126 23.418 -8.493 0.476 -4.130 C26 VXT 7 VXT C27 C27 C 0 1 N N N N N N 1.257 -29.127 23.613 -7.355 -0.515 -4.379 C27 VXT 8 VXT C28 C28 C 0 1 N N N N N N 1.036 -28.204 22.433 -6.178 0.213 -5.033 C28 VXT 9 VXT C29 C29 C 0 1 N N N N N N 1.277 -26.737 22.730 -5.040 -0.779 -5.282 C29 VXT 10 VXT C30 C30 C 0 1 N N N N N N 2.257 -26.506 23.879 -3.864 -0.051 -5.936 C30 VXT 11 VXT C31 C31 C 0 1 N N N N N N 1.017 -33.842 25.329 -11.725 -1.502 -2.715 C31 VXT 12 VXT O32 O1 O 0 1 N N N N N N 0.204 -34.103 26.464 -10.778 -1.726 -1.669 O32 VXT 13 VXT O33 O2 O 0 1 N N N N N N 3.308 -35.519 25.063 -11.968 -0.253 -0.408 O33 VXT 14 VXT O34 O3 O 0 1 N N N N N N 5.854 -34.352 24.898 -11.509 2.382 -0.100 O34 VXT 15 VXT H1 H1 H 0 1 N N N N N N 0.999 -31.512 24.298 -9.348 -0.682 -2.528 H1 VXT 16 VXT H2 H2 H 0 1 N N N N N N 1.902 -32.139 22.877 -10.017 -1.046 -4.136 H2 VXT 17 VXT H4 H4 H 0 1 N N N N N N 3.932 -33.383 23.219 -9.691 1.211 -1.480 H4 VXT 18 VXT H5 H5 H 0 1 N N N N N N 4.818 -31.916 23.758 -9.996 2.572 -2.603 H5 VXT 19 VXT H6 H6 H 0 1 N N N N N N 5.062 -32.806 26.011 -12.325 2.700 -1.991 H6 VXT 20 VXT H7 H7 H 0 1 N N N N N N 3.699 -34.494 26.806 -13.518 0.680 -1.436 H7 VXT 21 VXT H8 H8 H 0 1 N N N N N N 2.304 -32.767 26.644 -12.777 0.173 -3.586 H8 VXT 22 VXT H9 H9 H 0 1 N N N N N N 2.654 -30.119 22.357 -8.814 0.906 -5.079 H9 VXT 23 VXT H10 H10 H 0 1 N N N N N N 3.220 -29.820 24.036 -8.145 1.270 -3.470 H10 VXT 24 VXT H11 H11 H 0 1 N N N N N N 1.500 -28.511 24.491 -7.034 -0.946 -3.430 H11 VXT 25 VXT H12 H12 H 0 1 N N N N N N 0.323 -29.678 23.799 -7.702 -1.310 -5.039 H12 VXT 26 VXT H13 H13 H 0 1 N N N N N N -0.005 -28.320 22.096 -6.499 0.643 -5.981 H13 VXT 27 VXT H14 H14 H 0 1 N N N N N N 1.719 -28.508 21.626 -5.830 1.007 -4.373 H14 VXT 28 VXT H15 H15 H 0 1 N N N N N N 1.681 -26.259 21.825 -4.719 -1.209 -4.333 H15 VXT 29 VXT H16 H16 H 0 1 N N N N N N 0.316 -26.271 22.992 -5.388 -1.573 -5.942 H16 VXT 30 VXT H19 H19 H 0 1 N N N N N N 1.866 -26.348 24.895 -3.516 0.743 -5.275 H19 VXT 31 VXT H20 H20 H 0 1 N N N N N N 0.480 -33.138 24.676 -12.655 -2.021 -2.480 H20 VXT 32 VXT H21 H21 H 0 1 N N N N N N 1.176 -34.790 24.794 -11.325 -1.881 -3.655 H21 VXT 33 VXT H22 H22 H 0 1 N N N N N N -0.625 -34.472 26.182 -10.557 -2.658 -1.531 H22 VXT 34 VXT H23 H23 H 0 1 N N N N N N 2.537 -35.942 25.423 -12.153 0.104 0.471 H23 VXT 35 VXT H24 H24 H 0 1 N N N N N N 6.161 -34.800 25.678 -10.994 3.197 -0.028 H24 VXT 36 VXT N2 N2 N 0 1 Y N N N N N ? ? ? -2.773 -1.000 -6.174 N2 VXT 37 VXT N3 N3 N 0 1 Y N N N N N ? ? ? -2.604 -1.702 -7.240 N3 VXT 38 VXT N4 N4 N 0 1 Y N N N N N ? ? ? -1.551 -2.433 -7.127 N4 VXT 39 VXT C5 C5 C 0 1 Y N N N N N ? ? ? -0.994 -2.208 -5.932 C5 VXT 40 VXT C6 C6 C 0 1 Y N N N N N ? ? ? -1.768 -1.286 -5.314 C6 VXT 41 VXT C2 C2 C 0 1 N N N N N N ? ? ? -1.558 -0.701 -3.941 C2 VXT 42 VXT O1 O4 O 0 1 N N N N N N ? ? ? -0.387 -1.271 -3.354 O1 VXT 43 VXT C3 C3 C 0 1 N N N N N N ? ? ? 1.171 -1.457 -1.517 C3 VXT 44 VXT O6 O6 O 0 1 N N N N N N ? ? ? -0.138 -3.263 -0.587 O6 VXT 45 VXT O10 O10 O 0 1 N N N N N N ? ? ? 2.667 -1.564 0.379 O10 VXT 46 VXT C61 C61 C 0 1 N N N N N N ? ? ? 2.343 -1.144 -2.450 C61 VXT 47 VXT C9 C9 C 0 1 N N N N N N ? ? ? 3.621 0.672 -3.353 C9 VXT 48 VXT N6 N6 N 0 1 Y N N N N N ? ? ? 3.439 4.276 -2.921 N6 VXT 49 VXT N7 N7 N 0 1 Y N N N N N ? ? ? 4.426 4.155 -3.739 N7 VXT 50 VXT N8 N8 N 0 1 Y N N N N N ? ? ? 4.631 2.914 -4.005 N8 VXT 51 VXT C39 C39 C 0 1 Y N N N N N ? ? ? 3.741 2.174 -3.334 C39 VXT 52 VXT C11 C11 C 0 1 Y N N N N N ? ? ? 2.974 3.039 -2.631 C11 VXT 53 VXT C12 C12 C 0 1 N N N N N N ? ? ? 2.914 5.537 -2.391 C12 VXT 54 VXT C13 C13 C 0 1 N N N N N N ? ? ? 4.046 6.322 -1.726 C13 VXT 55 VXT C14 C14 C 0 1 N N N N N N ? ? ? 3.497 7.639 -1.173 C14 VXT 56 VXT C15 C15 C 0 1 N N N N N N ? ? ? 4.630 8.424 -0.508 C15 VXT 57 VXT C16 C16 C 0 1 N N N N N N ? ? ? 4.081 9.740 0.046 C16 VXT 58 VXT C21 C21 C 0 1 N N N N N N ? ? ? 5.213 10.526 0.711 C21 VXT 59 VXT N5 N5 N 0 1 N N N N N N ? ? ? 4.700 11.816 1.189 N5 VXT 60 VXT C23 C23 C 0 1 N N N N N N ? ? ? 5.750 12.569 1.920 C23 VXT 61 VXT C24 C24 C 0 1 N N N N N N ? ? ? 4.937 13.580 2.768 C24 VXT 62 VXT C25 C25 C 0 1 N N N N N N ? ? ? 3.697 12.758 3.189 C25 VXT 63 VXT C32 C32 C 0 1 N N N N N N ? ? ? 3.596 11.622 2.154 C32 VXT 64 VXT C22 C22 C 0 1 N N N N N N ? ? ? 2.250 11.696 1.430 C22 VXT 65 VXT O3 O8 O 0 1 N N N N N N ? ? ? 2.072 13.006 0.888 O3 VXT 66 VXT O4 O9 O 0 1 N N N N N N ? ? ? 3.881 12.220 4.500 O4 VXT 67 VXT O5 O5 O 0 1 N N N N N N ? ? ? 5.683 13.994 3.914 O5 VXT 68 VXT C33 C33 C 0 1 N N N N N N ? ? ? -0.424 -4.658 -0.462 C33 VXT 69 VXT N9 N9 N 0 1 Y N N N N N ? ? ? -3.230 -4.510 1.844 N9 VXT 70 VXT N10 N10 N 0 1 Y N N N N N ? ? ? -3.112 -5.777 1.649 N10 VXT 71 VXT N11 N11 N 0 1 Y N N N N N ? ? ? -2.142 -6.012 0.837 N11 VXT 72 VXT C36 C36 C 0 1 Y N N N N N ? ? ? -1.589 -4.849 0.475 C36 VXT 73 VXT C37 C37 C 0 1 Y N N N N N ? ? ? -2.283 -3.878 1.112 C37 VXT 74 VXT C4 C4 C 0 1 N N N N N N ? ? ? -4.223 -3.863 2.706 C4 VXT 75 VXT C8 C8 C 0 1 N N N N N N ? ? ? -5.627 -4.308 2.289 C8 VXT 76 VXT C10 C10 C 0 1 N N N N N N ? ? ? -6.663 -3.633 3.189 C10 VXT 77 VXT C34 C34 C 0 1 N N N N N N ? ? ? -8.067 -4.077 2.773 C34 VXT 78 VXT C35 C35 C 0 1 N N N N N N ? ? ? -9.104 -3.402 3.673 C35 VXT 79 VXT C38 C38 C 0 1 N N N N N N ? ? ? -10.507 -3.847 3.256 C38 VXT 80 VXT N12 N12 N 0 1 N N N N N N ? ? ? -11.493 -3.305 4.201 N12 VXT 81 VXT C41 C41 C 0 1 N N N N N N ? ? ? -12.876 -3.653 3.785 C41 VXT 82 VXT C42 C42 C 0 1 N N N N N N ? ? ? -13.744 -2.609 4.532 C42 VXT 83 VXT C43 C43 C 0 1 N N N N N N ? ? ? -12.880 -1.329 4.464 C43 VXT 84 VXT C44 C44 C 0 1 N N N N N N ? ? ? -11.441 -1.827 4.231 C44 VXT 85 VXT C40 C40 C 0 1 N N N N N N ? ? ? -10.536 -1.360 5.373 C40 VXT 86 VXT O7 O11 O 0 1 N N N N N N ? ? ? -11.103 -1.758 6.623 O7 VXT 87 VXT O8 O12 O 0 1 N N N N N N ? ? ? -13.301 -0.503 3.378 O8 VXT 88 VXT O9 O13 O 0 1 N N N N N N ? ? ? -14.990 -2.414 3.860 O9 VXT 89 VXT C45 C45 C 0 1 N N N N N N ? ? ? 3.048 -1.142 1.690 C45 VXT 90 VXT N13 N13 N 0 1 Y N N N N N ? ? ? 4.955 -1.736 3.266 N13 VXT 91 VXT N14 N14 N 0 1 Y N N N N N ? ? ? 5.978 -2.516 3.259 N14 VXT 92 VXT N15 N15 N 0 1 Y N N N N N ? ? ? 6.036 -3.162 2.147 N15 VXT 93 VXT C48 C48 C 0 1 Y N N N N N ? ? ? 4.987 -2.782 1.381 C48 VXT 94 VXT C49 C49 C 0 1 Y N N N N N ? ? ? 4.302 -1.868 2.106 C49 VXT 95 VXT C7 C7 C 0 1 N N N N N N ? ? ? 7.060 -4.141 1.775 C7 VXT 96 VXT C46 C46 C 0 1 N N N N N N ? ? ? 8.445 -3.504 1.908 C46 VXT 97 VXT C47 C47 C 0 1 N N N N N N ? ? ? 9.516 -4.527 1.520 C47 VXT 98 VXT C50 C50 C 0 1 N N N N N N ? ? ? 10.901 -3.890 1.652 C50 VXT 99 VXT C51 C51 C 0 1 N N N N N N ? ? ? 11.971 -4.912 1.264 C51 VXT 100 VXT C52 C52 C 0 1 N N N N N N ? ? ? 13.356 -4.276 1.396 C52 VXT 101 VXT N16 N16 N 0 1 N N N N N N ? ? ? 14.383 -5.257 1.024 N16 VXT 102 VXT C54 C54 C 0 1 N N N N N N ? ? ? 15.717 -4.613 0.908 C54 VXT 103 VXT C55 C55 C 0 1 N N N N N N ? ? ? 16.724 -5.774 1.057 C55 VXT 104 VXT C56 C56 C 0 1 N N N N N N ? ? ? 15.963 -6.867 1.836 C56 VXT 105 VXT C57 C57 C 0 1 N N N N N N ? ? ? 14.561 -6.274 2.092 C57 VXT 106 VXT C53 C53 C 0 1 N N N N N N ? ? ? 15.871 -3.946 -0.461 C53 VXT 107 VXT O11 O14 O 0 1 N N N N N N ? ? ? 15.855 -4.945 -1.482 O11 VXT 108 VXT O12 O15 O 0 1 N N N N N N ? ? ? 17.114 -6.261 -0.229 O12 VXT 109 VXT O13 O16 O 0 1 N N N N N N ? ? ? 15.863 -8.057 1.051 O13 VXT 110 VXT H3 H3 H 0 1 N N N N N N 3.177 -27.107 23.929 -4.185 0.379 -6.884 H3 VXT 111 VXT H28 H28 H 0 1 N N N N N N ? ? ? -1.435 0.380 -4.022 H28 VXT 112 VXT H29 H29 H 0 1 N N N N N N ? ? ? -2.423 -0.922 -3.316 H29 VXT 113 VXT H30 H30 H 0 1 N N N N N N ? ? ? 3.425 0.336 -4.371 H30 VXT 114 VXT H31 H31 H 0 1 N N N N N N ? ? ? 4.550 0.228 -2.996 H31 VXT 115 VXT H37 H37 H 0 1 N N N N N N ? ? ? 2.492 6.126 -3.205 H37 VXT 116 VXT H38 H38 H 0 1 N N N N N N ? ? ? 2.137 5.326 -1.656 H38 VXT 117 VXT H39 H39 H 0 1 N N N N N N ? ? ? 4.467 5.733 -0.912 H39 VXT 118 VXT H40 H40 H 0 1 N N N N N N ? ? ? 4.822 6.533 -2.462 H40 VXT 119 VXT H41 H41 H 0 1 N N N N N N ? ? ? 3.076 8.228 -1.987 H41 VXT 120 VXT H42 H42 H 0 1 N N N N N N ? ? ? 2.721 7.428 -0.437 H42 VXT 121 VXT H43 H43 H 0 1 N N N N N N ? ? ? 5.051 7.835 0.307 H43 VXT 122 VXT H44 H44 H 0 1 N N N N N N ? ? ? 5.406 8.635 -1.243 H44 VXT 123 VXT H45 H45 H 0 1 N N N N N N ? ? ? 3.659 10.330 -0.768 H45 VXT 124 VXT H46 H46 H 0 1 N N N N N N ? ? ? 3.304 9.530 0.781 H46 VXT 125 VXT H47 H47 H 0 1 N N N N N N ? ? ? 5.605 9.956 1.553 H47 VXT 126 VXT H48 H48 H 0 1 N N N N N N ? ? ? 6.010 10.697 -0.013 H48 VXT 127 VXT H49 H49 H 0 1 N N N N N N ? ? ? 6.324 11.902 2.563 H49 VXT 128 VXT H50 H50 H 0 1 N N N N N N ? ? ? 6.405 13.092 1.223 H50 VXT 129 VXT H51 H51 H 0 1 N N N N N N ? ? ? 4.643 14.440 2.166 H51 VXT 130 VXT H52 H52 H 0 1 N N N N N N ? ? ? 2.802 13.380 3.157 H52 VXT 131 VXT H53 H53 H 0 1 N N N N N N ? ? ? 3.702 10.658 2.650 H53 VXT 132 VXT H54 H54 H 0 1 N N N N N N ? ? ? 2.232 10.963 0.623 H54 VXT 133 VXT H55 H55 H 0 1 N N N N N N ? ? ? 1.446 11.481 2.134 H55 VXT 134 VXT H56 H56 H 0 1 N N N N N N ? ? ? 1.238 13.125 0.413 H56 VXT 135 VXT H57 H57 H 0 1 N N N N N N ? ? ? 3.995 12.889 5.188 H57 VXT 136 VXT H58 H58 H 0 1 N N N N N N ? ? ? 6.511 14.446 3.702 H58 VXT 137 VXT H59 H59 H 0 1 N N N N N N ? ? ? -0.675 -5.067 -1.441 H59 VXT 138 VXT H60 H60 H 0 1 N N N N N N ? ? ? 0.450 -5.174 -0.066 H60 VXT 139 VXT H66 H66 H 0 1 N N N N N N ? ? ? -4.044 -4.148 3.743 H66 VXT 140 VXT H67 H67 H 0 1 N N N N N N ? ? ? -4.140 -2.781 2.606 H67 VXT 141 VXT H68 H68 H 0 1 N N N N N N ? ? ? -5.805 -4.024 1.252 H68 VXT 142 VXT H69 H69 H 0 1 N N N N N N ? ? ? -5.709 -5.391 2.389 H69 VXT 143 VXT H70 H70 H 0 1 N N N N N N ? ? ? -6.485 -3.917 4.226 H70 VXT 144 VXT H71 H71 H 0 1 N N N N N N ? ? ? -6.581 -2.550 3.090 H71 VXT 145 VXT H72 H72 H 0 1 N N N N N N ? ? ? -8.245 -3.793 1.736 H72 VXT 146 VXT H73 H73 H 0 1 N N N N N N ? ? ? -8.149 -5.160 2.872 H73 VXT 147 VXT H74 H74 H 0 1 N N N N N N ? ? ? -8.925 -3.686 4.710 H74 VXT 148 VXT H75 H75 H 0 1 N N N N N N ? ? ? -9.021 -2.320 3.573 H75 VXT 149 VXT H76 H76 H 0 1 N N N N N N ? ? ? -10.723 -3.477 2.254 H76 VXT 150 VXT H77 H77 H 0 1 N N N N N N ? ? ? -10.560 -4.936 3.261 H77 VXT 151 VXT H78 H78 H 0 1 N N N N N N ? ? ? -12.991 -3.548 2.707 H78 VXT 152 VXT H79 H79 H 0 1 N N N N N N ? ? ? -13.130 -4.664 4.104 H79 VXT 153 VXT H80 H80 H 0 1 N N N N N N ? ? ? -13.906 -2.911 5.567 H80 VXT 154 VXT H81 H81 H 0 1 N N N N N N ? ? ? -12.942 -0.780 5.404 H81 VXT 155 VXT H82 H82 H 0 1 N N N N N N ? ? ? -11.067 -1.449 3.279 H82 VXT 156 VXT H83 H83 H 0 1 N N N N N N ? ? ? -9.550 -1.810 5.262 H83 VXT 157 VXT H84 H84 H 0 1 N N N N N N ? ? ? -10.446 -0.274 5.344 H84 VXT 158 VXT H85 H85 H 0 1 N N N N N N ? ? ? -10.581 -1.495 7.393 H85 VXT 159 VXT H86 H86 H 0 1 N N N N N N ? ? ? -14.215 -0.195 3.449 H86 VXT 160 VXT H87 H87 H 0 1 N N N N N N ? ? ? -15.537 -3.210 3.806 H87 VXT 161 VXT H88 H88 H 0 1 N N N N N N ? ? ? 3.234 -0.068 1.686 H88 VXT 162 VXT H89 H89 H 0 1 N N N N N N ? ? ? 2.246 -1.370 2.392 H89 VXT 163 VXT H95 H95 H 0 1 N N N N N N ? ? ? 6.993 -5.006 2.435 H95 VXT 164 VXT H96 H96 H 0 1 N N N N N N ? ? ? 6.903 -4.458 0.744 H96 VXT 165 VXT H97 H97 H 0 1 N N N N N N ? ? ? 8.512 -2.640 1.248 H97 VXT 166 VXT H98 H98 H 0 1 N N N N N N ? ? ? 8.602 -3.188 2.939 H98 VXT 167 VXT H99 H99 H 0 1 N N N N N N ? ? ? 9.448 -5.391 2.180 H99 VXT 168 VXT H100 H100 H 0 0 N N N N N N ? ? ? 9.358 -4.843 0.489 H100 VXT 169 VXT H101 H101 H 0 0 N N N N N N ? ? ? 10.968 -3.025 0.992 H101 VXT 170 VXT H102 H102 H 0 0 N N N N N N ? ? ? 11.058 -3.573 2.683 H102 VXT 171 VXT H103 H103 H 0 0 N N N N N N ? ? ? 11.904 -5.777 1.924 H103 VXT 172 VXT H104 H104 H 0 0 N N N N N N ? ? ? 11.814 -5.229 0.233 H104 VXT 173 VXT H105 H105 H 0 0 N N N N N N ? ? ? 13.423 -3.411 0.737 H105 VXT 174 VXT H106 H106 H 0 0 N N N N N N ? ? ? 13.513 -3.959 2.428 H106 VXT 175 VXT H107 H107 H 0 0 N N N N N N ? ? ? 15.858 -3.884 1.705 H107 VXT 176 VXT H108 H108 H 0 0 N N N N N N ? ? ? 17.598 -5.447 1.620 H108 VXT 177 VXT H109 H109 H 0 0 N N N N N N ? ? ? 16.464 -7.076 2.781 H109 VXT 178 VXT H110 H110 H 0 0 N N N N N N ? ? ? 14.520 -5.804 3.075 H110 VXT 179 VXT H111 H111 H 0 0 N N N N N N ? ? ? 13.799 -7.050 2.009 H111 VXT 180 VXT H112 H112 H 0 0 N N N N N N ? ? ? 15.047 -3.251 -0.620 H112 VXT 181 VXT H113 H113 H 0 0 N N N N N N ? ? ? 16.816 -3.405 -0.497 H113 VXT 182 VXT H114 H114 H 0 0 N N N N N N ? ? ? 15.948 -4.594 -2.378 H114 VXT 183 VXT H115 H115 H 0 0 N N N N N N ? ? ? 17.746 -6.992 -0.197 H115 VXT 184 VXT H116 H116 H 0 0 N N N N N N ? ? ? 15.394 -8.780 1.491 H116 VXT 185 VXT H25 H25 H 0 1 N N N N N N ? ? ? -0.100 -2.669 -5.539 H25 VXT 186 VXT C58 C58 C 0 1 N N N N N N ? ? ? 0.956 -2.971 -1.459 C58 VXT 187 VXT C59 C59 C 0 1 N N N N N N ? ? ? 1.483 -0.933 -0.114 C59 VXT 188 VXT C60 C60 C 0 1 N N N N N N ? ? ? -0.096 -0.781 -2.044 C60 VXT 189 VXT O14 O17 O 0 1 N N N N N N ? ? ? 2.544 0.270 -2.504 O14 VXT 190 VXT H61 H61 H 0 1 N N N N N N ? ? ? 3.245 -1.625 -2.075 H61 VXT 191 VXT H62 H62 H 0 1 N N N N N N ? ? ? 2.121 -1.518 -3.450 H62 VXT 192 VXT H63 H63 H 0 1 N N N N N N ? ? ? 0.734 -3.345 -2.459 H63 VXT 193 VXT H64 H64 H 0 1 N N N N N N ? ? ? 1.859 -3.452 -1.084 H64 VXT 194 VXT H65 H65 H 0 1 N N N N N N ? ? ? 1.637 0.146 -0.154 H65 VXT 195 VXT H92 H92 H 0 1 N N N N N N ? ? ? 0.649 -1.156 0.551 H92 VXT 196 VXT H93 H93 H 0 1 N N N N N N ? ? ? 0.058 0.297 -2.085 H93 VXT 197 VXT H94 H94 H 0 1 N N N N N N ? ? ? -0.930 -1.005 -1.379 H94 VXT 198 VXT H17 H17 H 0 1 N N N N N N ? ? ? 2.152 2.792 -1.975 H17 VXT 199 VXT H18 H18 H 0 1 N N N N N N ? ? ? -2.113 -2.813 1.054 H18 VXT 200 VXT H26 H26 H 0 1 N N N N N N ? ? ? 4.747 -3.136 0.389 H26 VXT 201 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VXT C28 C29 SING N N 1 VXT C28 C27 SING N N 2 VXT C29 C30 SING N N 3 VXT C26 C27 SING N N 4 VXT C26 C1 SING N N 5 VXT C1 N1 SING N N 6 VXT C17 N1 SING N N 7 VXT C17 C18 SING N N 8 VXT N1 C20 SING N N 9 VXT O34 C18 SING N N 10 VXT O33 C19 SING N N 11 VXT C18 C19 SING N N 12 VXT C31 C20 SING N N 13 VXT C31 O32 SING N N 14 VXT C20 C19 SING N N 15 VXT C1 H1 SING N N 16 VXT C1 H2 SING N N 17 VXT C17 H4 SING N N 18 VXT C17 H5 SING N N 19 VXT C18 H6 SING N N 20 VXT C19 H7 SING N N 21 VXT C20 H8 SING N N 22 VXT C26 H9 SING N N 23 VXT C26 H10 SING N N 24 VXT C27 H11 SING N N 25 VXT C27 H12 SING N N 26 VXT C28 H13 SING N N 27 VXT C28 H14 SING N N 28 VXT C29 H15 SING N N 29 VXT C29 H16 SING N N 30 VXT C30 H19 SING N N 31 VXT C31 H20 SING N N 32 VXT C31 H21 SING N N 33 VXT O32 H22 SING N N 34 VXT O33 H23 SING N N 35 VXT O34 H24 SING N N 36 VXT C30 N2 SING N N 37 VXT N2 N3 SING Y N 38 VXT N3 N4 DOUB Y N 39 VXT N4 C5 SING Y N 40 VXT C5 C6 DOUB Y N 41 VXT C6 N2 SING Y N 42 VXT C6 C2 SING N N 43 VXT C2 O1 SING N N 44 VXT C3 C61 SING N N 45 VXT N6 N7 SING Y N 46 VXT N7 N8 DOUB Y N 47 VXT N8 C39 SING Y N 48 VXT C39 C11 DOUB Y N 49 VXT C11 N6 SING Y N 50 VXT C12 C13 SING N N 51 VXT C13 C14 SING N N 52 VXT C14 C15 SING N N 53 VXT C15 C16 SING N N 54 VXT C16 C21 SING N N 55 VXT C21 N5 SING N N 56 VXT N5 C23 SING N N 57 VXT C23 C24 SING N N 58 VXT C24 C25 SING N N 59 VXT C25 C32 SING N N 60 VXT C32 N5 SING N N 61 VXT C32 C22 SING N N 62 VXT C22 O3 SING N N 63 VXT C25 O4 SING N N 64 VXT C24 O5 SING N N 65 VXT O6 C33 SING N N 66 VXT N9 N10 SING Y N 67 VXT N10 N11 DOUB Y N 68 VXT N11 C36 SING Y N 69 VXT C36 C37 DOUB Y N 70 VXT C37 N9 SING Y N 71 VXT C4 C8 SING N N 72 VXT C8 C10 SING N N 73 VXT C10 C34 SING N N 74 VXT C34 C35 SING N N 75 VXT C35 C38 SING N N 76 VXT C38 N12 SING N N 77 VXT N12 C41 SING N N 78 VXT C41 C42 SING N N 79 VXT C42 C43 SING N N 80 VXT C43 C44 SING N N 81 VXT C44 N12 SING N N 82 VXT C44 C40 SING N N 83 VXT C40 O7 SING N N 84 VXT C43 O8 SING N N 85 VXT C42 O9 SING N N 86 VXT O10 C45 SING N N 87 VXT N13 N14 DOUB Y N 88 VXT N14 N15 SING Y N 89 VXT N15 C48 SING Y N 90 VXT C48 C49 DOUB Y N 91 VXT C49 N13 SING Y N 92 VXT C7 C46 SING N N 93 VXT C46 C47 SING N N 94 VXT C47 C50 SING N N 95 VXT C50 C51 SING N N 96 VXT C51 C52 SING N N 97 VXT C52 N16 SING N N 98 VXT N16 C54 SING N N 99 VXT C54 C55 SING N N 100 VXT C55 C56 SING N N 101 VXT C56 C57 SING N N 102 VXT C57 N16 SING N N 103 VXT C54 C53 SING N N 104 VXT C53 O11 SING N N 105 VXT C55 O12 SING N N 106 VXT C56 O13 SING N N 107 VXT C30 H3 SING N N 108 VXT C2 H28 SING N N 109 VXT C2 H29 SING N N 110 VXT C9 H30 SING N N 111 VXT C9 H31 SING N N 112 VXT C12 H37 SING N N 113 VXT C12 H38 SING N N 114 VXT C13 H39 SING N N 115 VXT C13 H40 SING N N 116 VXT C14 H41 SING N N 117 VXT C14 H42 SING N N 118 VXT C15 H43 SING N N 119 VXT C15 H44 SING N N 120 VXT C16 H45 SING N N 121 VXT C16 H46 SING N N 122 VXT C21 H47 SING N N 123 VXT C21 H48 SING N N 124 VXT C23 H49 SING N N 125 VXT C23 H50 SING N N 126 VXT C24 H51 SING N N 127 VXT C25 H52 SING N N 128 VXT C32 H53 SING N N 129 VXT C22 H54 SING N N 130 VXT C22 H55 SING N N 131 VXT O3 H56 SING N N 132 VXT O4 H57 SING N N 133 VXT O5 H58 SING N N 134 VXT C33 H59 SING N N 135 VXT C33 H60 SING N N 136 VXT C4 H66 SING N N 137 VXT C4 H67 SING N N 138 VXT C8 H68 SING N N 139 VXT C8 H69 SING N N 140 VXT C10 H70 SING N N 141 VXT C10 H71 SING N N 142 VXT C34 H72 SING N N 143 VXT C34 H73 SING N N 144 VXT C35 H74 SING N N 145 VXT C35 H75 SING N N 146 VXT C38 H76 SING N N 147 VXT C38 H77 SING N N 148 VXT C41 H78 SING N N 149 VXT C41 H79 SING N N 150 VXT C42 H80 SING N N 151 VXT C43 H81 SING N N 152 VXT C44 H82 SING N N 153 VXT C40 H83 SING N N 154 VXT C40 H84 SING N N 155 VXT O7 H85 SING N N 156 VXT O8 H86 SING N N 157 VXT O9 H87 SING N N 158 VXT C45 H88 SING N N 159 VXT C45 H89 SING N N 160 VXT C7 H95 SING N N 161 VXT C7 H96 SING N N 162 VXT C46 H97 SING N N 163 VXT C46 H98 SING N N 164 VXT C47 H99 SING N N 165 VXT C47 H100 SING N N 166 VXT C50 H101 SING N N 167 VXT C50 H102 SING N N 168 VXT C51 H103 SING N N 169 VXT C51 H104 SING N N 170 VXT C52 H105 SING N N 171 VXT C52 H106 SING N N 172 VXT C54 H107 SING N N 173 VXT C55 H108 SING N N 174 VXT C56 H109 SING N N 175 VXT C57 H110 SING N N 176 VXT C57 H111 SING N N 177 VXT C53 H112 SING N N 178 VXT C53 H113 SING N N 179 VXT O11 H114 SING N N 180 VXT O12 H115 SING N N 181 VXT O13 H116 SING N N 182 VXT C36 C33 SING N N 183 VXT C5 H25 SING N N 184 VXT C39 C9 SING N N 185 VXT C49 C45 SING N N 186 VXT O6 C58 SING N N 187 VXT O10 C59 SING N N 188 VXT O1 C60 SING N N 189 VXT C9 O14 SING N N 190 VXT C3 C58 SING N N 191 VXT C3 C60 SING N N 192 VXT C3 C59 SING N N 193 VXT C61 O14 SING N N 194 VXT C61 H61 SING N N 195 VXT C61 H62 SING N N 196 VXT C58 H63 SING N N 197 VXT C58 H64 SING N N 198 VXT C59 H65 SING N N 199 VXT C59 H92 SING N N 200 VXT C60 H93 SING N N 201 VXT C60 H94 SING N N 202 VXT N9 C4 SING N N 203 VXT C7 N15 SING N N 204 VXT N6 C12 SING N N 205 VXT C11 H17 SING N N 206 VXT C37 H18 SING N N 207 VXT C48 H26 SING N N 208 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VXT InChI InChI 1.06 "InChI=1S/C61H108N16O16/c78-33-49-57(86)53(82)29-70(49)17-9-1-5-13-21-74-26-45(63-67-74)37-90-41-61(42-91-38-46-27-75(68-64-46)22-14-6-2-10-18-71-30-54(83)58(87)50(71)34-79,43-92-39-47-28-76(69-65-47)23-15-7-3-11-19-72-31-55(84)59(88)51(72)35-80)44-93-40-48-25-62-66-77(48)24-16-8-4-12-20-73-32-56(85)60(89)52(73)36-81/h25-28,49-60,78-89H,1-24,29-44H2/t49?,50?,51?,52-,53?,54?,55?,56-,57?,58?,59?,60+,61?/m0/s1" VXT InChIKey InChI 1.06 BABIPLNVVXCNQC-AMTCWONISA-N VXT SMILES_CANONICAL CACTVS 3.385 "OCC1C(O)C(O)CN1CCCCCCn2cc(COCC(COCc3cn(CCCCCCN4CC(O)C(O)C4CO)nn3)(COCc5cn(CCCCCCN6CC(O)C(O)C6CO)nn5)COCc7cnnn7CCCCCCN8C[C@H](O)[C@H](O)[C@@H]8CO)nn2" VXT SMILES CACTVS 3.385 "OCC1C(O)C(O)CN1CCCCCCn2cc(COCC(COCc3cn(CCCCCCN4CC(O)C(O)C4CO)nn3)(COCc5cn(CCCCCCN6CC(O)C(O)C6CO)nn5)COCc7cnnn7CCCCCCN8C[CH](O)[CH](O)[CH]8CO)nn2" VXT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(n(nn1)CCCCCCN2C[C@@H]([C@@H]([C@@H]2CO)O)O)COCC(COCc3cn(nn3)CCCCCCN4CC(C(C4CO)O)O)(COCc5cn(nn5)CCCCCCN6CC(C(C6CO)O)O)COCc7cn(nn7)CCCCCCN8CC(C(C8CO)O)O" VXT SMILES "OpenEye OEToolkits" 2.0.7 "c1c(n(nn1)CCCCCCN2CC(C(C2CO)O)O)COCC(COCc3cn(nn3)CCCCCCN4CC(C(C4CO)O)O)(COCc5cn(nn5)CCCCCCN6CC(C(C6CO)O)O)COCc7cn(nn7)CCCCCCN8CC(C(C8CO)O)O" # _pdbx_chem_comp_identifier.comp_id VXT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(hydroxymethyl)-1-[6-[4-[[3-[[3-[6-[(2~{S},3~{R},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-1-yl]hexyl]-1,2,3-triazol-4-yl]methoxy]-2,2-bis[[1-[6-[2-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidin-1-yl]hexyl]-1,2,3-triazol-4-yl]methoxymethyl]propoxy]methyl]-1,2,3-triazol-1-yl]hexyl]pyrrolidine-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VXT "Create component" 2023-09-20 PDBE VXT "Modify aromatic_flag" 2023-09-26 PDBE VXT "Modify formula" 2023-10-06 PDBE VXT "Modify formula" 2023-11-02 PDBE VXT "Initial release" 2024-10-02 RCSB #