data_VZK # _chem_comp.id VZK _chem_comp.name "~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 N2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2023-09-21 _chem_comp.pdbx_modified_date 2024-09-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 289.394 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VZK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8WDD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VZK C02 C1 C 0 1 N N N N N N -54.271 -29.715 -50.972 -2.497 -0.656 0.010 C02 VZK 1 VZK C04 C2 C 0 1 Y N N N N N -56.287 -28.252 -50.924 -4.392 0.977 0.005 C04 VZK 2 VZK C05 C3 C 0 1 Y N N N N N -57.594 -27.957 -51.274 -5.750 1.218 -0.007 C05 VZK 3 VZK C07 C4 C 0 1 Y N N N N N -57.721 -29.954 -52.490 -6.232 -1.041 -0.008 C07 VZK 4 VZK C08 C5 C 0 1 Y N N N N N -56.413 -30.253 -52.141 -4.894 -1.375 -0.002 C08 VZK 5 VZK C09 C6 C 0 1 N N N N N N -59.664 -28.494 -52.411 -8.048 0.528 -0.018 C09 VZK 6 VZK C11 C7 C 0 1 Y N N N N N -47.928 -32.376 -49.105 4.845 0.144 -0.001 C11 VZK 7 VZK C13 C8 C 0 1 Y N N N N N -49.490 -31.050 -50.336 2.555 -0.587 0.010 C13 VZK 8 VZK C14 C9 C 0 1 Y N N N N N -50.493 -31.957 -50.028 2.137 0.769 0.011 C14 VZK 9 VZK C15 C10 C 0 1 Y N N N N N -50.213 -33.075 -49.257 3.102 1.794 0.011 C15 VZK 10 VZK C16 C11 C 0 1 Y N N N N N -49.767 -29.934 -51.106 1.593 -1.614 0.009 C16 VZK 11 VZK C17 C12 C 0 1 Y N N N N N -51.054 -29.727 -51.568 0.271 -1.307 0.010 C17 VZK 12 VZK C18 C13 C 0 1 Y N N N N N -52.054 -30.635 -51.265 -0.157 0.034 0.011 C18 VZK 13 VZK C22 C14 C 0 1 N N N N N N -46.315 -33.519 -47.564 6.659 -1.544 -0.014 C22 VZK 14 VZK C01 C15 C 0 1 N N N N N N -53.469 -30.386 -51.771 -1.598 0.341 0.011 C01 VZK 15 VZK C03 C16 C 0 1 Y N N N N N -55.711 -29.397 -51.361 -3.938 -0.349 0.005 C03 VZK 16 VZK C10 C17 C 0 1 Y N N N N N -48.927 -33.286 -48.794 4.424 1.480 0.000 C10 VZK 17 VZK C12 C18 C 0 1 Y N N N N N -48.206 -31.260 -49.874 3.927 -0.884 0.004 C12 VZK 18 VZK C19 C19 C 0 1 Y N N N N N -51.779 -31.748 -50.490 0.767 1.068 0.017 C19 VZK 19 VZK C21 C20 C 0 1 N N N N N N -45.482 -31.832 -49.228 7.192 0.937 -0.024 C21 VZK 20 VZK N06 N1 N 1 1 Y N N N N N -58.294 -28.811 -52.053 -6.615 0.222 -0.012 N06 VZK 21 VZK N20 N2 N 0 1 N N N N N N -46.575 -32.577 -48.632 6.209 -0.149 -0.013 N20 VZK 22 VZK H1 H1 H 0 1 N N N N N N -53.899 -29.380 -50.015 -2.164 -1.684 0.010 H1 VZK 23 VZK H2 H2 H 0 1 N N N N N N -55.727 -27.569 -50.303 -3.690 1.798 0.010 H2 VZK 24 VZK H3 H3 H 0 1 N N N N N N -58.054 -27.044 -50.924 -6.110 2.237 -0.011 H3 VZK 25 VZK H4 H4 H 0 1 N N N N N N -58.283 -30.635 -53.112 -6.976 -1.823 -0.013 H4 VZK 26 VZK H5 H5 H 0 1 N N N N N N -55.955 -31.167 -52.490 -4.587 -2.410 0.002 H5 VZK 27 VZK H6 H6 H 0 1 N N N N N N -59.947 -27.530 -51.963 -8.407 0.606 1.008 H6 VZK 28 VZK H7 H7 H 0 1 N N N N N N -59.751 -28.429 -53.506 -8.216 1.473 -0.535 H7 VZK 29 VZK H8 H8 H 0 1 N N N N N N -60.333 -29.283 -52.036 -8.587 -0.268 -0.532 H8 VZK 30 VZK H9 H9 H 0 1 N N N N N N -50.997 -33.779 -49.019 2.792 2.828 0.012 H9 VZK 31 VZK H10 H10 H 0 1 N N N N N N -48.984 -29.230 -51.344 1.906 -2.647 0.009 H10 VZK 32 VZK H11 H11 H 0 1 N N N N N N -51.279 -28.856 -52.166 -0.461 -2.101 0.004 H11 VZK 33 VZK H12 H12 H 0 1 N N N N N N -47.260 -33.982 -47.245 6.761 -1.892 -1.041 H12 VZK 34 VZK H13 H13 H 0 1 N N N N N N -45.628 -34.299 -47.923 7.622 -1.616 0.492 H13 VZK 35 VZK H14 H14 H 0 1 N N N N N N -45.859 -32.992 -46.713 5.928 -2.162 0.508 H14 VZK 36 VZK H15 H15 H 0 1 N N N N N N -53.797 -30.742 -52.736 -1.931 1.369 0.012 H15 VZK 37 VZK H16 H16 H 0 1 N N N N N N -48.702 -34.155 -48.193 5.159 2.270 -0.008 H16 VZK 38 VZK H17 H17 H 0 1 N N N N N N -47.422 -30.556 -50.112 4.260 -1.911 0.003 H17 VZK 39 VZK H18 H18 H 0 1 N N N N N N -52.564 -32.449 -50.248 0.435 2.096 0.018 H18 VZK 40 VZK H19 H19 H 0 1 N N N N N N -44.536 -32.116 -48.743 7.445 1.209 1.001 H19 VZK 41 VZK H20 H20 H 0 1 N N N N N N -45.426 -32.061 -50.303 8.091 0.608 -0.545 H20 VZK 42 VZK H21 H21 H 0 1 N N N N N N -45.655 -30.754 -49.091 6.772 1.802 -0.536 H21 VZK 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VZK C07 C08 DOUB Y N 1 VZK C07 N06 SING Y N 2 VZK C09 N06 SING N N 3 VZK C08 C03 SING Y N 4 VZK N06 C05 DOUB Y N 5 VZK C01 C18 SING N N 6 VZK C01 C02 DOUB N E 7 VZK C17 C18 DOUB Y N 8 VZK C17 C16 SING Y N 9 VZK C03 C02 SING N N 10 VZK C03 C04 DOUB Y N 11 VZK C05 C04 SING Y N 12 VZK C18 C19 SING Y N 13 VZK C16 C13 DOUB Y N 14 VZK C19 C14 DOUB Y N 15 VZK C13 C14 SING Y N 16 VZK C13 C12 SING Y N 17 VZK C14 C15 SING Y N 18 VZK C12 C11 DOUB Y N 19 VZK C15 C10 DOUB Y N 20 VZK C21 N20 SING N N 21 VZK C11 C10 SING Y N 22 VZK C11 N20 SING N N 23 VZK N20 C22 SING N N 24 VZK C02 H1 SING N N 25 VZK C04 H2 SING N N 26 VZK C05 H3 SING N N 27 VZK C07 H4 SING N N 28 VZK C08 H5 SING N N 29 VZK C09 H6 SING N N 30 VZK C09 H7 SING N N 31 VZK C09 H8 SING N N 32 VZK C15 H9 SING N N 33 VZK C16 H10 SING N N 34 VZK C17 H11 SING N N 35 VZK C22 H12 SING N N 36 VZK C22 H13 SING N N 37 VZK C22 H14 SING N N 38 VZK C01 H15 SING N N 39 VZK C10 H16 SING N N 40 VZK C12 H17 SING N N 41 VZK C19 H18 SING N N 42 VZK C21 H19 SING N N 43 VZK C21 H20 SING N N 44 VZK C21 H21 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VZK InChI InChI 1.06 "InChI=1S/C20H21N2/c1-21(2)20-9-8-18-14-17(6-7-19(18)15-20)5-4-16-10-12-22(3)13-11-16/h4-15H,1-3H3/q+1" VZK InChIKey InChI 1.06 LJEHGRUCASFWGC-UHFFFAOYSA-N VZK SMILES_CANONICAL CACTVS 3.385 "CN(C)c1ccc2cc(\C=C\c3cc[n+](C)cc3)ccc2c1" VZK SMILES CACTVS 3.385 "CN(C)c1ccc2cc(C=Cc3cc[n+](C)cc3)ccc2c1" VZK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[n+]1ccc(cc1)/C=C/c2ccc3cc(ccc3c2)N(C)C" VZK SMILES "OpenEye OEToolkits" 2.0.7 "C[n+]1ccc(cc1)C=Cc2ccc3cc(ccc3c2)N(C)C" # _pdbx_chem_comp_identifier.comp_id VZK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VZK "Create component" 2023-09-21 PDBC VZK "Initial release" 2024-09-18 RCSB #