data_VZO # _chem_comp.id VZO _chem_comp.name "N-[5-cyano-4-(2-methoxyethylamino)pyridin-2-yl]-5-methanoyl-6-[(4-methylpiperazin-1-yl)methyl]-1-propan-2-yl-pyrrolo[3,2-b]pyridine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H34 N8 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-07 _chem_comp.pdbx_modified_date 2024-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.611 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VZO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8W5C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VZO C10 C1 C 0 1 Y N N N N N -0.610 -18.901 13.033 -2.220 1.390 -0.749 C10 VZO 1 VZO N12 N1 N 0 1 Y N N N N N -2.055 -17.203 12.236 -2.042 -0.975 -0.884 N12 VZO 2 VZO C13 C2 C 0 1 Y N N N N N -1.695 -17.382 10.994 -3.346 -1.075 -1.109 C13 VZO 3 VZO C15 C3 C 0 1 Y N N N N N -0.989 -18.873 15.209 -0.094 1.984 -0.352 C15 VZO 4 VZO C17 C4 C 0 1 N N N N N N 0.662 -20.548 14.430 -1.749 3.850 -0.500 C17 VZO 5 VZO C20 C5 C 0 1 N N N N N N 5.142 -19.984 8.252 -8.708 -0.904 3.232 C20 VZO 6 VZO C21 C6 C 0 1 N N N N N N -2.411 -16.477 10.031 -3.950 -2.406 -1.302 C21 VZO 7 VZO C26 C7 C 0 1 Y N N N N N -4.431 -14.989 14.627 3.440 -0.529 -0.049 C26 VZO 8 VZO C28 C8 C 0 1 Y N N N N N -6.455 -14.306 15.751 5.790 -0.808 0.324 C28 VZO 9 VZO C01 C9 C 0 1 N N N N N N 1.442 -19.831 8.001 -7.755 -0.616 -0.401 C01 VZO 10 VZO C02 C10 C 0 1 N N N N N N 2.790 -20.183 7.759 -8.401 -1.216 0.850 C02 VZO 11 VZO N03 N2 N 0 1 N N N N N N 3.791 -19.640 8.489 -8.045 -0.403 2.021 N03 VZO 12 VZO C04 C11 C 0 1 N N N N N N 3.477 -18.761 9.460 -6.587 -0.355 2.201 C04 VZO 13 VZO C05 C12 C 0 1 N N N N N N 2.157 -18.407 9.701 -5.940 0.245 0.950 C05 VZO 14 VZO N06 N3 N 0 1 N N N N N N 1.139 -18.962 8.969 -6.297 -0.568 -0.221 N06 VZO 15 VZO C07 C13 C 0 1 N N N N N N -0.264 -18.613 9.191 -5.633 -0.067 -1.432 C07 VZO 16 VZO C08 C14 C 0 1 Y N N N N N -0.707 -18.372 10.643 -4.154 0.065 -1.176 C08 VZO 17 VZO C09 C15 C 0 1 Y N N N N N -0.174 -19.145 11.692 -3.589 1.312 -0.989 C09 VZO 18 VZO C11 C16 C 0 1 Y N N N N N -1.545 -17.925 13.230 -1.463 0.200 -0.705 C11 VZO 19 VZO N14 N4 N 0 1 Y N N N N N -0.301 -19.436 14.239 -1.357 2.439 -0.532 N14 VZO 20 VZO C16 C17 C 0 1 Y N N N N N -1.797 -17.879 14.641 -0.074 0.623 -0.443 C16 VZO 21 VZO C18 C18 C 0 1 N N N N N N 1.441 -20.395 15.762 -1.407 4.443 0.868 C18 VZO 22 VZO C19 C19 C 0 1 N N N N N N -0.226 -21.835 14.431 -0.995 4.614 -1.590 C19 VZO 23 VZO O22 O1 O 0 1 N N N N N N -2.122 -16.341 8.861 -5.152 -2.516 -1.410 O22 VZO 24 VZO C23 C20 C 0 1 N N N N N N -2.836 -16.928 15.295 1.099 -0.250 -0.308 C23 VZO 25 VZO N24 N5 N 0 1 N N N N N N -3.376 -15.969 14.413 2.313 0.285 -0.068 N24 VZO 26 VZO O25 O2 O 0 1 N N N N N N -3.158 -17.028 16.473 0.976 -1.456 -0.413 O25 VZO 27 VZO C27 C21 C 0 1 Y N N N N N -5.406 -15.238 15.621 4.667 0.012 0.308 C27 VZO 28 VZO C29 C22 C 0 1 Y N N N N N -6.482 -13.201 14.857 5.629 -2.165 -0.025 C29 VZO 29 VZO C30 C23 C 0 1 Y N N N N N -5.472 -13.052 13.880 4.357 -2.629 -0.361 C30 VZO 30 VZO N31 N6 N 0 1 Y N N N N N -4.504 -13.953 13.789 3.324 -1.812 -0.368 N31 VZO 31 VZO N32 N7 N 0 1 N N N N N N -7.480 -14.467 16.759 7.034 -0.305 0.675 N32 VZO 32 VZO C33 C24 C 0 1 N N N N N N -7.128 -14.901 18.091 7.178 1.108 1.034 C33 VZO 33 VZO C34 C25 C 0 1 N N N N N N -8.027 -16.113 18.486 8.640 1.401 1.375 C34 VZO 34 VZO O35 O3 O 0 1 N N N N N N -8.351 -16.831 17.283 9.446 1.224 0.209 O35 VZO 35 VZO C36 C26 C 0 1 N N N N N N -9.223 -17.949 17.497 10.837 1.474 0.421 C36 VZO 36 VZO C37 C27 C 0 1 N N N N N N -7.629 -12.171 14.985 6.752 -3.055 -0.025 C37 VZO 37 VZO N38 N8 N 0 1 N N N N N N -8.487 -11.443 15.130 7.642 -3.760 -0.025 N38 VZO 38 VZO H1 H1 H 0 1 N N N N N N -0.940 -19.131 16.257 0.769 2.606 -0.164 H1 VZO 39 VZO H2 H2 H 0 1 N N N N N N 1.371 -20.593 13.590 -2.822 3.933 -0.674 H2 VZO 40 VZO H3 H3 H 0 1 N N N N N N 5.789 -19.433 8.951 -8.402 -1.933 3.415 H3 VZO 41 VZO H4 H4 H 0 1 N N N N N N 5.277 -21.065 8.402 -8.427 -0.284 4.083 H4 VZO 42 VZO H5 H5 H 0 1 N N N N N N 5.411 -19.721 7.218 -9.789 -0.865 3.096 H5 VZO 43 VZO H6 H6 H 0 1 N N N N N N -3.245 -15.905 10.409 -3.320 -3.283 -1.347 H6 VZO 44 VZO H7 H7 H 0 1 N N N N N N 1.051 -19.409 7.063 -7.995 -1.234 -1.266 H7 VZO 45 VZO H8 H8 H 0 1 N N N N N N 2.859 -21.272 7.895 -9.485 -1.225 0.730 H8 VZO 46 VZO H9 H9 H 0 1 N N N N N N 3.865 -19.180 10.400 -6.347 0.263 3.066 H9 VZO 47 VZO H10 H10 H 0 1 N N N N N N 2.092 -17.319 9.555 -6.300 1.264 0.808 H10 VZO 48 VZO H11 H11 H 0 1 N N N N N N -0.469 -17.692 8.625 -5.799 -0.766 -2.252 H11 VZO 49 VZO H12 H12 H 0 1 N N N N N N -0.877 -19.434 8.790 -6.045 0.907 -1.695 H12 VZO 50 VZO H13 H13 H 0 1 N N N N N N 0.556 -19.914 11.487 -4.195 2.205 -1.029 H13 VZO 51 VZO H14 H14 H 0 1 N N N N N N 2.145 -21.233 15.874 -1.699 5.493 0.892 H14 VZO 52 VZO H15 H15 H 0 1 N N N N N N 1.998 -19.447 15.754 -1.944 3.899 1.645 H15 VZO 53 VZO H16 H16 H 0 1 N N N N N N 0.732 -20.397 16.603 -0.334 4.360 1.042 H16 VZO 54 VZO H17 H17 H 0 1 N N N N N N 0.411 -22.721 14.569 0.078 4.531 -1.416 H17 VZO 55 VZO H18 H18 H 0 1 N N N N N N -0.955 -21.777 15.253 -1.239 4.191 -2.565 H18 VZO 56 VZO H19 H19 H 0 1 N N N N N N -0.759 -21.913 13.472 -1.287 5.664 -1.566 H19 VZO 57 VZO H20 H20 H 0 1 N N N N N N -2.971 -15.961 13.499 2.400 1.237 0.093 H20 VZO 58 VZO H21 H21 H 0 1 N N N N N N -5.349 -16.109 16.256 4.749 1.057 0.568 H21 VZO 59 VZO H22 H22 H 0 1 N N N N N N -5.489 -12.206 13.209 4.218 -3.667 -0.624 H22 VZO 60 VZO H23 H23 H 0 1 N N N N N N -7.931 -13.580 16.855 7.808 -0.888 0.682 H23 VZO 61 VZO H24 H24 H 0 1 N N N N N N -6.071 -15.204 18.113 6.869 1.730 0.193 H24 VZO 62 VZO H25 H25 H 0 1 N N N N N N -7.288 -14.077 18.802 6.551 1.329 1.898 H25 VZO 63 VZO H26 H26 H 0 1 N N N N N N -8.949 -15.754 18.967 8.732 2.429 1.728 H26 VZO 64 VZO H27 H27 H 0 1 N N N N N N -7.484 -16.771 19.180 8.974 0.718 2.156 H27 VZO 65 VZO H28 H28 H 0 1 N N N N N N -9.425 -18.446 16.537 11.381 1.317 -0.511 H28 VZO 66 VZO H29 H29 H 0 1 N N N N N N -8.744 -18.661 18.185 10.975 2.503 0.753 H29 VZO 67 VZO H30 H30 H 0 1 N N N N N N -10.169 -17.597 17.934 11.217 0.792 1.182 H30 VZO 68 VZO H31 H31 H 0 1 N N N N N N 0.908 -20.764 8.234 -8.135 0.394 -0.558 H31 VZO 69 VZO H32 H32 H 0 1 N N N N N N 2.996 -19.931 6.708 -8.042 -2.235 0.992 H32 VZO 70 VZO H33 H33 H 0 1 N N N N N N 4.013 -17.830 9.225 -6.207 -1.365 2.358 H33 VZO 71 VZO H34 H34 H 0 1 N N N N N N 1.954 -18.649 10.755 -4.857 0.255 1.070 H34 VZO 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VZO C02 C01 SING N N 1 VZO C02 N03 SING N N 2 VZO C01 N06 SING N N 3 VZO C20 N03 SING N N 4 VZO N03 C04 SING N N 5 VZO O22 C21 DOUB N N 6 VZO N06 C07 SING N N 7 VZO N06 C05 SING N N 8 VZO C07 C08 SING N N 9 VZO C04 C05 SING N N 10 VZO C21 C13 SING N N 11 VZO C08 C13 DOUB Y N 12 VZO C08 C09 SING Y N 13 VZO C13 N12 SING Y N 14 VZO C09 C10 DOUB Y N 15 VZO N12 C11 DOUB Y N 16 VZO C10 C11 SING Y N 17 VZO C10 N14 SING Y N 18 VZO C11 C16 SING Y N 19 VZO N31 C30 DOUB Y N 20 VZO N31 C26 SING Y N 21 VZO C30 C29 SING Y N 22 VZO N14 C17 SING N N 23 VZO N14 C15 SING Y N 24 VZO N24 C26 SING N N 25 VZO N24 C23 SING N N 26 VZO C17 C19 SING N N 27 VZO C17 C18 SING N N 28 VZO C26 C27 DOUB Y N 29 VZO C16 C15 DOUB Y N 30 VZO C16 C23 SING N N 31 VZO C29 C37 SING N N 32 VZO C29 C28 DOUB Y N 33 VZO C37 N38 TRIP N N 34 VZO C23 O25 DOUB N N 35 VZO C27 C28 SING Y N 36 VZO C28 N32 SING N N 37 VZO N32 C33 SING N N 38 VZO O35 C36 SING N N 39 VZO O35 C34 SING N N 40 VZO C33 C34 SING N N 41 VZO C15 H1 SING N N 42 VZO C17 H2 SING N N 43 VZO C20 H3 SING N N 44 VZO C20 H4 SING N N 45 VZO C20 H5 SING N N 46 VZO C21 H6 SING N N 47 VZO C01 H7 SING N N 48 VZO C02 H8 SING N N 49 VZO C04 H9 SING N N 50 VZO C05 H10 SING N N 51 VZO C07 H11 SING N N 52 VZO C07 H12 SING N N 53 VZO C09 H13 SING N N 54 VZO C18 H14 SING N N 55 VZO C18 H15 SING N N 56 VZO C18 H16 SING N N 57 VZO C19 H17 SING N N 58 VZO C19 H18 SING N N 59 VZO C19 H19 SING N N 60 VZO N24 H20 SING N N 61 VZO C27 H21 SING N N 62 VZO C30 H22 SING N N 63 VZO N32 H23 SING N N 64 VZO C33 H24 SING N N 65 VZO C33 H25 SING N N 66 VZO C34 H26 SING N N 67 VZO C34 H27 SING N N 68 VZO C36 H28 SING N N 69 VZO C36 H29 SING N N 70 VZO C36 H30 SING N N 71 VZO C01 H31 SING N N 72 VZO C02 H32 SING N N 73 VZO C04 H33 SING N N 74 VZO C05 H34 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VZO InChI InChI 1.06 "InChI=1S/C27H34N8O3/c1-18(2)35-16-21(27(37)32-25-12-22(29-5-10-38-4)20(13-28)14-30-25)26-24(35)11-19(23(17-36)31-26)15-34-8-6-33(3)7-9-34/h11-12,14,16-18H,5-10,15H2,1-4H3,(H2,29,30,32,37)" VZO InChIKey InChI 1.06 JOGBCZWNFGWQHB-UHFFFAOYSA-N VZO SMILES_CANONICAL CACTVS 3.385 "COCCNc1cc(NC(=O)c2cn(C(C)C)c3cc(CN4CCN(C)CC4)c(C=O)nc23)ncc1C#N" VZO SMILES CACTVS 3.385 "COCCNc1cc(NC(=O)c2cn(C(C)C)c3cc(CN4CCN(C)CC4)c(C=O)nc23)ncc1C#N" VZO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)n1cc(c2c1cc(c(n2)C=O)CN3CCN(CC3)C)C(=O)Nc4cc(c(cn4)C#N)NCCOC" VZO SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)n1cc(c2c1cc(c(n2)C=O)CN3CCN(CC3)C)C(=O)Nc4cc(c(cn4)C#N)NCCOC" # _pdbx_chem_comp_identifier.comp_id VZO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[5-cyano-4-(2-methoxyethylamino)pyridin-2-yl]-5-methanoyl-6-[(4-methylpiperazin-1-yl)methyl]-1-propan-2-yl-pyrrolo[3,2-b]pyridine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VZO "Create component" 2023-09-07 PDBJ VZO "Initial release" 2024-07-31 RCSB #