data_VZT # _chem_comp.id VZT _chem_comp.name "bis(4-fluorophenyl)methyl (1R,2S,5R)-2-({(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-3-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H33 F2 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-21 _chem_comp.pdbx_modified_date 2024-09-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 541.586 _chem_comp.one_letter_code ? _chem_comp.three_letter_code VZT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8U9M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal VZT C10 C1 C 0 1 Y N N N N N -9.150 -18.907 -20.013 2.948 -0.779 -1.189 C10 VZT 1 VZT C11 C2 C 0 1 Y N N N N N -9.107 -19.277 -21.347 2.799 -2.000 -1.819 C11 VZT 2 VZT C12 C3 C 0 1 N N N N N N -9.751 -15.920 -18.006 0.596 0.637 0.394 C12 VZT 3 VZT C13 C4 C 0 1 N N N N N N -8.248 -14.764 -19.658 0.447 3.101 1.000 C13 VZT 4 VZT C14 C5 C 0 1 N N S N N N -9.247 -13.545 -17.803 -1.556 2.007 0.444 C14 VZT 5 VZT C15 C6 C 0 1 N N N N N N -10.660 -13.036 -17.941 -2.163 0.957 -0.451 C15 VZT 6 VZT C16 C7 C 0 1 N N S N N N -7.801 -13.313 -19.756 -0.346 4.123 0.157 C16 VZT 7 VZT C17 C8 C 0 1 N N S N N N -12.639 -12.061 -16.927 -3.988 -0.536 -1.063 C17 VZT 8 VZT C18 C9 C 0 1 N N N N N N -6.823 -12.934 -18.650 -1.660 4.662 0.726 C18 VZT 9 VZT C19 C10 C 0 1 N N N N N N -13.527 -12.865 -15.960 -5.080 -1.289 -0.299 C19 VZT 10 VZT C2 C11 C 0 1 N N N N N N -9.991 -17.761 -19.580 2.610 -0.639 0.273 C2 VZT 11 VZT C20 C12 C 0 1 N N S N N N -13.614 -14.330 -16.389 -4.446 -2.082 0.845 C20 VZT 12 VZT C21 C13 C 0 1 N N N N N N -14.391 -14.503 -17.693 -3.518 -3.187 0.289 C21 VZT 13 VZT C22 C14 C 0 1 N N N N N N -15.186 -15.797 -17.507 -3.757 -4.335 1.295 C22 VZT 14 VZT C23 C15 C 0 1 N N N N N N -6.307 -13.953 -17.620 -1.917 4.459 2.220 C23 VZT 15 VZT C24 C16 C 0 1 N N N N N N -14.377 -15.190 -15.422 -5.505 -2.840 1.615 C24 VZT 16 VZT C25 C17 C 0 1 N N N N N N -5.956 -11.684 -18.844 -2.202 5.964 0.134 C25 VZT 17 VZT C26 C18 C 0 1 Y N N N N N -8.292 -20.332 -21.750 3.114 -2.131 -3.158 C26 VZT 18 VZT C27 C19 C 0 1 Y N N N N N -7.511 -21.007 -20.817 3.579 -1.038 -3.869 C27 VZT 19 VZT C28 C20 C 0 1 Y N N N N N -7.545 -20.629 -19.480 3.728 0.185 -3.237 C28 VZT 20 VZT C29 C21 C 0 1 Y N N N N N -8.363 -19.574 -19.077 3.412 0.313 -1.898 C29 VZT 21 VZT C3 C22 C 0 1 Y N N N N N -11.450 -18.062 -19.560 3.876 -0.688 1.088 C3 VZT 22 VZT C34 C23 C 0 1 N N R N N N -8.312 -12.567 -18.524 -1.659 3.401 -0.212 C34 VZT 23 VZT C4 C24 C 0 1 Y N N N N N -12.225 -17.249 -20.375 4.298 -1.884 1.639 C4 VZT 24 VZT C5 C25 C 0 1 Y N N N N N -13.589 -17.438 -20.493 5.459 -1.930 2.386 C5 VZT 25 VZT C6 C26 C 0 1 Y N N N N N -14.189 -18.462 -19.782 6.201 -0.777 2.584 C6 VZT 26 VZT C7 C27 C 0 1 Y N N N N N -13.422 -19.298 -18.962 5.777 0.420 2.032 C7 VZT 27 VZT C8 C28 C 0 1 N N N N N N -12.676 -10.575 -16.564 -4.599 0.134 -2.296 C8 VZT 28 VZT C9 C29 C 0 1 Y N N N N N -12.042 -19.102 -18.847 4.618 0.463 1.281 C9 VZT 29 VZT F30 F1 F 0 1 N N N N N N -15.519 -18.623 -19.921 7.336 -0.821 3.315 F30 VZT 30 VZT F31 F2 F 0 1 N N N N N N -6.721 -22.026 -21.208 3.888 -1.165 -5.178 F31 VZT 31 VZT N13 N1 N 0 1 N N N N N N -9.121 -14.832 -18.486 -0.087 1.782 0.589 N13 VZT 32 VZT N16 N2 N 0 1 N N N N N N -11.251 -12.513 -16.869 -3.399 0.485 -0.194 N16 VZT 33 VZT N23 N3 N 0 1 N N N N N N -15.219 -15.996 -16.069 -5.096 -4.099 1.847 N23 VZT 34 VZT O1 O1 O 0 1 N N N N N N -9.383 -17.262 -18.407 1.939 0.629 0.496 O1 VZT 35 VZT O26 O2 O 0 1 N N N N N N -14.220 -15.149 -14.214 -6.569 -2.379 1.970 O26 VZT 36 VZT O33 O3 O 0 1 N N N N N N -10.638 -15.880 -17.186 0.001 -0.388 0.127 O33 VZT 37 VZT O38 O4 O 0 1 N N N N N N -11.225 -13.128 -19.020 -1.539 0.536 -1.402 O38 VZT 38 VZT O9 O5 O 0 1 N N N N N N -14.021 -10.057 -16.628 -5.690 0.965 -1.895 O9 VZT 39 VZT H11 H1 H 0 1 N N N N N N -9.705 -18.748 -22.074 2.437 -2.853 -1.264 H11 VZT 40 VZT H13 H2 H 0 1 N N N N N N -7.379 -15.425 -19.527 1.511 3.167 0.775 H13 VZT 41 VZT H131 H3 H 0 0 N N N N N N -8.799 -15.057 -20.564 0.273 3.267 2.064 H131 VZT 42 VZT H14 H4 H 0 1 N N N N N N -8.967 -13.627 -16.742 -2.040 2.001 1.421 H14 VZT 43 VZT H16 H5 H 0 1 N N N N N N -7.759 -12.808 -20.732 0.208 4.715 -0.571 H16 VZT 44 VZT H17 H6 H 0 1 N N N N N N -13.028 -12.186 -17.948 -3.215 -1.237 -1.377 H17 VZT 45 VZT H191 H7 H 0 0 N N N N N N -13.099 -12.811 -14.948 -5.797 -0.575 0.107 H191 VZT 46 VZT H19 H8 H 0 1 N N N N N N -14.538 -12.431 -15.954 -5.591 -1.973 -0.976 H19 VZT 47 VZT H2 H9 H 0 1 N N N N N N -9.859 -16.989 -20.352 1.952 -1.455 0.573 H2 VZT 48 VZT H20 H10 H 0 1 N N N N N N -12.598 -14.731 -16.517 -3.892 -1.418 1.509 H20 VZT 49 VZT H211 H11 H 0 0 N N N N N N -15.069 -13.652 -17.856 -3.820 -3.480 -0.716 H211 VZT 50 VZT H21 H12 H 0 1 N N N N N N -13.702 -14.591 -18.546 -2.477 -2.866 0.304 H21 VZT 51 VZT H22 H13 H 0 1 N N N N N N -16.204 -15.690 -17.909 -3.724 -5.297 0.784 H22 VZT 52 VZT H221 H14 H 0 0 N N N N N N -14.682 -16.639 -18.005 -3.010 -4.303 2.088 H221 VZT 53 VZT H232 H15 H 0 0 N N N N N N -5.238 -14.145 -17.797 -1.192 5.036 2.795 H232 VZT 54 VZT H23 H16 H 0 1 N N N N N N -6.444 -13.550 -16.606 -2.925 4.797 2.464 H23 VZT 55 VZT H231 H17 H 0 0 N N N N N N -6.870 -14.893 -17.721 -1.818 3.402 2.466 H231 VZT 56 VZT H252 H18 H 0 0 N N N N N N -4.900 -11.979 -18.930 -1.613 6.239 -0.741 H252 VZT 57 VZT H251 H19 H 0 0 N N N N N N -6.267 -11.161 -19.761 -3.243 5.825 -0.158 H251 VZT 58 VZT H25 H20 H 0 1 N N N N N N -6.080 -11.014 -17.980 -2.137 6.757 0.879 H25 VZT 59 VZT H26 H21 H 0 1 N N N N N N -8.266 -20.627 -22.789 2.998 -3.086 -3.649 H26 VZT 60 VZT H28 H22 H 0 1 N N N N N N -6.939 -21.151 -18.755 4.090 1.039 -3.791 H28 VZT 61 VZT H29 H23 H 0 1 N N N N N N -8.386 -19.274 -18.040 3.528 1.267 -1.405 H29 VZT 62 VZT H341 H24 H 0 0 N N N N N N -8.611 -11.513 -18.620 -2.112 3.462 -1.201 H341 VZT 63 VZT H4 H25 H 0 1 N N N N N N -11.752 -16.452 -20.929 3.719 -2.783 1.485 H4 VZT 64 VZT H5 H26 H 0 1 N N N N N N -14.178 -16.796 -21.131 5.788 -2.864 2.817 H5 VZT 65 VZT H7 H27 H 0 1 N N N N N N -13.898 -20.098 -18.415 6.355 1.320 2.186 H7 VZT 66 VZT H81 H28 H 0 1 N N N N N N -12.289 -10.445 -15.542 -3.842 0.742 -2.791 H81 VZT 67 VZT H8 H29 H 0 1 N N N N N N -12.042 -10.017 -17.269 -4.958 -0.630 -2.984 H8 VZT 68 VZT H9 H30 H 0 1 N N N N N N -11.446 -19.745 -18.217 4.288 1.396 0.850 H9 VZT 69 VZT HN16 H31 H 0 0 N N N N N N -10.739 -12.429 -16.014 -3.898 0.821 0.567 HN16 VZT 70 VZT HN23 H32 H 0 0 N N N N N N -15.808 -16.664 -15.614 -5.618 -4.766 2.320 HN23 VZT 71 VZT HO9 H33 H 0 1 N N N N N N -14.017 -9.135 -16.399 -6.126 1.423 -2.627 HO9 VZT 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal VZT O33 C12 DOUB N N 1 VZT N13 C12 SING N N 2 VZT C12 O1 SING N N 3 VZT C14 N13 SING N N 4 VZT C13 N13 SING N N 5 VZT C14 C34 SING N N 6 VZT C15 C14 SING N N 7 VZT C34 C18 SING N N 8 VZT C34 C16 SING N N 9 VZT C23 C18 SING N N 10 VZT C25 C18 SING N N 11 VZT C18 C16 SING N N 12 VZT C16 C13 SING N N 13 VZT O38 C15 DOUB N N 14 VZT N16 C15 SING N N 15 VZT C17 N16 SING N N 16 VZT C8 C17 SING N N 17 VZT C19 C17 SING N N 18 VZT O9 C8 SING N N 19 VZT C20 C19 SING N N 20 VZT C20 C21 SING N N 21 VZT C24 C20 SING N N 22 VZT C21 C22 SING N N 23 VZT C22 N23 SING N N 24 VZT N23 C24 SING N N 25 VZT O26 C24 DOUB N N 26 VZT O1 C2 SING N N 27 VZT C3 C2 SING N N 28 VZT C2 C10 SING N N 29 VZT C3 C4 DOUB Y N 30 VZT C9 C3 SING Y N 31 VZT C4 C5 SING Y N 32 VZT C5 C6 DOUB Y N 33 VZT C6 C7 SING Y N 34 VZT F30 C6 SING N N 35 VZT C7 C9 DOUB Y N 36 VZT C10 C11 DOUB Y N 37 VZT C10 C29 SING Y N 38 VZT C11 C26 SING Y N 39 VZT C26 C27 DOUB Y N 40 VZT C28 C27 SING Y N 41 VZT C27 F31 SING N N 42 VZT C29 C28 DOUB Y N 43 VZT C11 H11 SING N N 44 VZT C13 H13 SING N N 45 VZT C13 H131 SING N N 46 VZT C14 H14 SING N N 47 VZT C16 H16 SING N N 48 VZT C17 H17 SING N N 49 VZT C19 H191 SING N N 50 VZT C19 H19 SING N N 51 VZT C2 H2 SING N N 52 VZT C20 H20 SING N N 53 VZT C21 H211 SING N N 54 VZT C21 H21 SING N N 55 VZT C22 H22 SING N N 56 VZT C22 H221 SING N N 57 VZT C23 H232 SING N N 58 VZT C23 H23 SING N N 59 VZT C23 H231 SING N N 60 VZT C25 H252 SING N N 61 VZT C25 H251 SING N N 62 VZT C25 H25 SING N N 63 VZT C26 H26 SING N N 64 VZT C28 H28 SING N N 65 VZT C29 H29 SING N N 66 VZT C34 H341 SING N N 67 VZT C4 H4 SING N N 68 VZT C5 H5 SING N N 69 VZT C7 H7 SING N N 70 VZT C8 H81 SING N N 71 VZT C8 H8 SING N N 72 VZT C9 H9 SING N N 73 VZT N16 HN16 SING N N 74 VZT N23 HN23 SING N N 75 VZT O9 HO9 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor VZT SMILES ACDLabs 12.01 "O=C1NCCC1CC(CO)NC(=O)C1C2C(CN1C(=O)OC(c1ccc(F)cc1)c1ccc(F)cc1)C2(C)C" VZT InChI InChI 1.06 "InChI=1S/C29H33F2N3O5/c1-29(2)22-14-34(24(23(22)29)27(37)33-21(15-35)13-18-11-12-32-26(18)36)28(38)39-25(16-3-7-19(30)8-4-16)17-5-9-20(31)10-6-17/h3-10,18,21-25,35H,11-15H2,1-2H3,(H,32,36)(H,33,37)/t18-,21+,22-,23-,24-/m0/s1" VZT InChIKey InChI 1.06 VEVIPXKCWNADLF-GXWFBMCDSA-N VZT SMILES_CANONICAL CACTVS 3.385 "CC1(C)[C@H]2CN([C@@H]([C@@H]12)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C(=O)OC(c4ccc(F)cc4)c5ccc(F)cc5" VZT SMILES CACTVS 3.385 "CC1(C)[CH]2CN([CH]([CH]12)C(=O)N[CH](CO)C[CH]3CCNC3=O)C(=O)OC(c4ccc(F)cc4)c5ccc(F)cc5" VZT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)OC(c3ccc(cc3)F)c4ccc(cc4)F)C(=O)N[C@@H](C[C@@H]5CCNC5=O)CO)C" VZT SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)OC(c3ccc(cc3)F)c4ccc(cc4)F)C(=O)NC(CC5CCNC5=O)CO)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier VZT "SYSTEMATIC NAME" ACDLabs 12.01 "bis(4-fluorophenyl)methyl (1R,2S,5R)-2-({(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-3-carboxylate" VZT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "bis(4-fluorophenyl)methyl (1~{R},2~{S},5~{S})-6,6-dimethyl-2-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]-3-azabicyclo[3.1.0]hexane-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site VZT "Create component" 2023-09-21 RCSB VZT "Initial release" 2024-09-25 RCSB #