data_W0U # _chem_comp.id W0U _chem_comp.name "[(2~{S},4~{S},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methoxy-~{N}-[(2~{S},3~{S})-2-azanyl-3-oxidanyl-butanoyl]phosphonamidic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H22 N7 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-24 _chem_comp.pdbx_modified_date 2023-07-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 431.341 _chem_comp.one_letter_code ? _chem_comp.three_letter_code W0U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OU8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal W0U N1 N1 N 0 1 N N N 11.799 35.984 17.348 3.860 -0.217 -0.301 N1 W0U 1 W0U N3 N2 N 0 1 Y N N 18.348 37.754 15.540 -3.303 1.884 -0.437 N3 W0U 2 W0U C4 C1 C 0 1 N N N 11.772 34.699 16.918 3.363 0.909 0.248 C4 W0U 3 W0U C5 C2 C 0 1 N N N 14.167 36.504 19.018 1.238 -2.351 -0.529 C5 W0U 4 W0U C6 C3 C 0 1 N N S 15.452 36.808 19.670 -0.205 -2.541 -0.056 C6 W0U 5 W0U C7 C4 C 0 1 N N R 17.674 36.999 19.051 -2.223 -1.483 0.219 C7 W0U 6 W0U C8 C5 C 0 1 N N S 17.293 38.267 19.831 -2.437 -2.382 -1.018 C8 W0U 7 W0U C10 C6 C 0 1 Y N N 17.551 37.531 16.566 -2.395 0.951 -0.421 C10 W0U 8 W0U C13 C7 C 0 1 Y N N 20.910 37.847 15.506 -5.761 1.905 0.227 C13 W0U 9 W0U C1 C8 C 0 1 N N N 11.492 33.970 19.712 5.184 4.101 -0.829 C1 W0U 10 W0U C2 C9 C 0 1 N N S 10.368 33.517 18.810 4.976 2.754 -0.133 C2 W0U 11 W0U C3 C10 C 0 1 N N S 10.532 33.893 17.320 3.569 2.236 -0.437 C3 W0U 12 W0U P1 P1 P 0 1 N N N 12.919 37.175 16.860 3.630 -1.661 0.442 P1 W0U 13 W0U O1 O1 O 0 1 N N N 13.179 37.146 15.358 4.263 -2.733 -0.359 O1 W0U 14 W0U O2 O2 O 0 1 N N N 14.275 36.786 17.608 2.052 -1.951 0.575 O2 W0U 15 W0U O3 O3 O 0 1 N N N 16.507 36.199 18.900 -0.797 -1.267 0.277 O3 W0U 16 W0U C9 C11 C 0 1 N N N 15.790 38.284 19.688 -1.078 -3.095 -1.204 C9 W0U 17 W0U O4 O4 O 0 1 N N N 17.817 39.450 19.266 -2.750 -1.590 -2.165 O4 W0U 18 W0U N2 N3 N 0 1 Y N N 18.232 37.279 17.736 -2.928 -0.210 0.052 N2 W0U 19 W0U C11 C12 C 0 1 Y N N 19.573 37.389 17.428 -4.247 0.032 0.344 C11 W0U 20 W0U C12 C13 C 0 1 Y N N 19.633 37.693 16.075 -4.473 1.382 0.024 C12 W0U 21 W0U N4 N4 N 0 1 N N N 21.136 38.050 14.207 -6.043 3.227 -0.070 N4 W0U 22 W0U N5 N5 N 0 1 Y N N 21.970 37.723 16.338 -6.702 1.101 0.711 N5 W0U 23 W0U C14 C14 C 0 1 Y N N 21.761 37.401 17.619 -6.442 -0.162 0.997 C14 W0U 24 W0U N6 N6 N 0 1 Y N N 20.615 37.223 18.260 -5.251 -0.695 0.823 N6 W0U 25 W0U O5 O5 O 0 1 N N N 12.592 38.476 17.567 4.295 -1.623 1.908 O5 W0U 26 W0U O6 O6 O 0 1 N N N 12.622 34.187 16.191 2.750 0.855 1.293 O6 W0U 27 W0U N7 N7 N 0 1 N N N 10.457 32.665 16.476 2.575 3.200 0.054 N7 W0U 28 W0U O7 O7 O 0 1 N N N 10.090 32.104 18.837 5.942 1.816 -0.610 O7 W0U 29 W0U H1 H1 H 0 1 N N N 11.101 36.258 18.010 4.350 -0.174 -1.137 H1 W0U 30 W0U H2 H2 H 0 1 N N N 13.374 37.126 19.458 1.614 -3.290 -0.935 H2 W0U 31 W0U H3 H3 H 0 1 N N N 13.922 35.441 19.163 1.269 -1.582 -1.301 H3 W0U 32 W0U H4 H4 H 0 1 N N N 15.453 36.419 20.699 -0.237 -3.212 0.803 H4 W0U 33 W0U H5 H5 H 0 1 N N N 18.419 36.449 19.644 -2.567 -1.991 1.121 H5 W0U 34 W0U H6 H6 H 0 1 N N N 17.576 38.158 20.888 -3.227 -3.110 -0.831 H6 W0U 35 W0U H7 H7 H 0 1 N N N 16.473 37.545 16.496 -1.370 1.079 -0.737 H7 W0U 36 W0U H8 H8 H 0 1 N N N 11.283 33.656 20.745 5.068 3.976 -1.905 H8 W0U 37 W0U H9 H9 H 0 1 N N N 12.437 33.518 19.376 4.447 4.816 -0.464 H9 W0U 38 W0U H10 H10 H 0 1 N N N 11.575 35.066 19.672 6.187 4.470 -0.612 H10 W0U 39 W0U H11 H11 H 0 1 N N N 9.462 34.035 19.157 5.092 2.879 0.944 H11 W0U 40 W0U H12 H12 H 0 1 N N N 9.661 34.513 17.061 3.452 2.110 -1.514 H12 W0U 41 W0U H13 H13 H 0 1 N N N 15.484 38.774 18.752 -0.643 -2.842 -2.171 H13 W0U 42 W0U H14 H14 H 0 1 N N N 15.314 38.791 20.540 -1.196 -4.174 -1.107 H14 W0U 43 W0U H15 H15 H 0 1 N N N 17.549 40.197 19.789 -2.894 -2.104 -2.971 H15 W0U 44 W0U H16 H16 H 0 1 N N N 22.122 38.081 14.040 -5.348 3.804 -0.423 H16 W0U 45 W0U H17 H17 H 0 1 N N N 20.732 37.304 13.678 -6.937 3.576 0.075 H17 W0U 46 W0U H18 H18 H 0 1 N N N 22.652 37.267 18.215 -7.236 -0.781 1.388 H18 W0U 47 W0U H19 H19 H 0 1 N N N 12.586 39.187 16.937 3.928 -0.942 2.488 H19 W0U 48 W0U H20 H20 H 0 1 N N N 9.650 32.133 16.732 2.662 3.333 1.050 H20 W0U 49 W0U H21 H21 H 0 1 N N N 10.392 32.926 15.513 2.650 4.078 -0.437 H21 W0U 50 W0U H23 H23 H 0 1 N N N 9.980 31.820 19.737 6.859 2.081 -0.451 H23 W0U 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal W0U N4 C13 SING N N 1 W0U O1 P1 DOUB N N 2 W0U C13 C12 DOUB Y N 3 W0U C13 N5 SING Y N 4 W0U N3 C12 SING Y N 5 W0U N3 C10 DOUB Y N 6 W0U C12 C11 SING Y N 7 W0U O6 C4 DOUB N N 8 W0U N5 C14 DOUB Y N 9 W0U N7 C3 SING N N 10 W0U C10 N2 SING Y N 11 W0U P1 N1 SING N N 12 W0U P1 O5 SING N N 13 W0U P1 O2 SING N N 14 W0U C4 C3 SING N N 15 W0U C4 N1 SING N N 16 W0U C3 C2 SING N N 17 W0U C11 N2 SING Y N 18 W0U C11 N6 DOUB Y N 19 W0U O2 C5 SING N N 20 W0U C14 N6 SING Y N 21 W0U N2 C7 SING N N 22 W0U C2 O7 SING N N 23 W0U C2 C1 SING N N 24 W0U O3 C7 SING N N 25 W0U O3 C6 SING N N 26 W0U C5 C6 SING N N 27 W0U C7 C8 SING N N 28 W0U O4 C8 SING N N 29 W0U C6 C9 SING N N 30 W0U C9 C8 SING N N 31 W0U N1 H1 SING N N 32 W0U C5 H2 SING N N 33 W0U C5 H3 SING N N 34 W0U C6 H4 SING N N 35 W0U C7 H5 SING N N 36 W0U C8 H6 SING N N 37 W0U C10 H7 SING N N 38 W0U C1 H8 SING N N 39 W0U C1 H9 SING N N 40 W0U C1 H10 SING N N 41 W0U C2 H11 SING N N 42 W0U C3 H12 SING N N 43 W0U C9 H13 SING N N 44 W0U C9 H14 SING N N 45 W0U O4 H15 SING N N 46 W0U N4 H16 SING N N 47 W0U N4 H17 SING N N 48 W0U C14 H18 SING N N 49 W0U O5 H19 SING N N 50 W0U N7 H20 SING N N 51 W0U N7 H21 SING N N 52 W0U O7 H23 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor W0U InChI InChI 1.06 "InChI=1S/C14H22N7O7P/c1-6(22)9(15)13(24)20-29(25,26)27-3-7-2-8(23)14(28-7)21-5-19-10-11(16)17-4-18-12(10)21/h4-9,14,22-23H,2-3,15H2,1H3,(H2,16,17,18)(H2,20,24,25,26)/t6-,7-,8-,9-,14+/m0/s1" W0U InChIKey InChI 1.06 ATWLNPAQYPTPKC-UDFANUMJSA-N W0U SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)[C@H](N)C(=O)N[P](O)(=O)OC[C@@H]1C[C@H](O)[C@@H](O1)n2cnc3c(N)ncnc23" W0U SMILES CACTVS 3.385 "C[CH](O)[CH](N)C(=O)N[P](O)(=O)OC[CH]1C[CH](O)[CH](O1)n2cnc3c(N)ncnc23" W0U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]([C@@H](C(=O)NP(=O)(O)OC[C@@H]1C[C@@H]([C@@H](O1)n2cnc3c2ncnc3N)O)N)O" W0U SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(C(=O)NP(=O)(O)OCC1CC(C(O1)n2cnc3c2ncnc3N)O)N)O" # _pdbx_chem_comp_identifier.comp_id W0U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},4~{S},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methoxy-~{N}-[(2~{S},3~{S})-2-azanyl-3-oxidanyl-butanoyl]phosphonamidic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site W0U "Create component" 2023-04-24 PDBE W0U "Initial release" 2023-07-12 RCSB #